RNA–Protein interactions for RNA: ENST00000567813.1

EDC3-213, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-213ENST00000567813 CDK11AQ9UQ88 783 aaPredicted RBP9.68□□□□□ -0.86
EDC3-213ENST00000567813 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
EDC3-213ENST00000567813 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
EDC3-213ENST00000567813 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
EDC3-213ENST00000567813 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
EDC3-213ENST00000567813 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
EDC3-213ENST00000567813 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
EDC3-213ENST00000567813 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
EDC3-213ENST00000567813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
EDC3-213ENST00000567813 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
EDC3-213ENST00000567813 PREX2Q70Z35 1606 aa9.66□□□□□ -0.86
EDC3-213ENST00000567813 MLH3Q9UHC1 1453 aa9.66□□□□□ -0.86
EDC3-213ENST00000567813 CLIP1P30622 1438 aa9.65□□□□□ -0.86
EDC3-213ENST00000567813 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
EDC3-213ENST00000567813 ATP10AO60312 1499 aa9.65□□□□□ -0.87
EDC3-213ENST00000567813 LMTK3Q96Q04 1460 aa9.65□□□□□ -0.87
EDC3-213ENST00000567813 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.87
EDC3-213ENST00000567813 ABCC1P33527 1531 aa9.64□□□□□ -0.87
EDC3-213ENST00000567813 C9orf84Q5VXU9 1444 aa9.64□□□□□ -0.87
EDC3-213ENST00000567813 AGLP35573 1532 aa9.63□□□□□ -0.87
EDC3-213ENST00000567813 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
EDC3-213ENST00000567813 DIP2CQ9Y2E4 1556 aa9.62□□□□□ -0.87
EDC3-213ENST00000567813 CDC42BPAQ5VT25 1732 aa9.61□□□□□ -0.87
EDC3-213ENST00000567813 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
EDC3-213ENST00000567813 KIAA1107Q9UPP5 1409 aa9.6□□□□□ -0.87
EDC3-213ENST00000567813 ITSN2Q9NZM3 1697 aa9.6□□□□□ -0.87
EDC3-213ENST00000567813 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
EDC3-213ENST00000567813 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
EDC3-213ENST00000567813 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
EDC3-213ENST00000567813 FER1L4A9Z1Z3 1794 aa9.58□□□□□ -0.88
EDC3-213ENST00000567813 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
EDC3-213ENST00000567813 TRAPPC8Q9Y2L5 1435 aa9.57□□□□□ -0.88
EDC3-213ENST00000567813 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
EDC3-213ENST00000567813 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
EDC3-213ENST00000567813 PLEKHH2Q8IVE3 1493 aa9.56□□□□□ -0.88
EDC3-213ENST00000567813 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
EDC3-213ENST00000567813 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
EDC3-213ENST00000567813 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
EDC3-213ENST00000567813 EHBP1L1Q8N3D4 1523 aa9.54□□□□□ -0.88
EDC3-213ENST00000567813 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
EDC3-213ENST00000567813 ARID4BQ4LE39 1312 aaPredicted RBP9.54□□□□□ -0.88
EDC3-213ENST00000567813 FOXD1Q16676 465 aa9.53□□□□□ -0.88
EDC3-213ENST00000567813 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
EDC3-213ENST00000567813 MBD5Q9P267 1494 aa9.53□□□□□ -0.88
EDC3-213ENST00000567813 SYCP2Q9BX26 1530 aa9.52□□□□□ -0.88
EDC3-213ENST00000567813 MROH2AA6NES4 1674 aa9.52□□□□□ -0.89
EDC3-213ENST00000567813 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
EDC3-213ENST00000567813 CNTLNQ9NXG0 1405 aa9.52□□□□□ -0.89
EDC3-213ENST00000567813 SETD1BQ9UPS6 1966 aaKnown RBP9.52□□□□□ -0.89
EDC3-213ENST00000567813 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
EDC3-213ENST00000567813 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
EDC3-213ENST00000567813 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
EDC3-213ENST00000567813 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
EDC3-213ENST00000567813 NPATQ14207 1427 aa9.5□□□□□ -0.89
EDC3-213ENST00000567813 FAM135AQ9P2D6 1515 aa9.5□□□□□ -0.89
EDC3-213ENST00000567813 C3P01024 1663 aa9.49□□□□□ -0.89
EDC3-213ENST00000567813 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
EDC3-213ENST00000567813 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
EDC3-213ENST00000567813 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
EDC3-213ENST00000567813 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
EDC3-213ENST00000567813 CCNB3Q8WWL7 1395 aa9.48□□□□□ -0.89
EDC3-213ENST00000567813 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
EDC3-213ENST00000567813 FBXO41Q8TF61 875 aa9.47□□□□□ -0.89
EDC3-213ENST00000567813 ADGBQ8N7X0 1667 aa9.47□□□□□ -0.89
EDC3-213ENST00000567813 A2MP01023 1474 aa9.47□□□□□ -0.89
EDC3-213ENST00000567813 ARHGEF5Q12774 1597 aa9.46□□□□□ -0.89
EDC3-213ENST00000567813 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
EDC3-213ENST00000567813 SPAG9O60271 1321 aaKnown RBP9.46□□□□□ -0.9
EDC3-213ENST00000567813 UHRF1BP1Q6BDS2 1440 aa9.46□□□□□ -0.9
EDC3-213ENST00000567813 VPS8Q8N3P4 1428 aa9.46□□□□□ -0.9
EDC3-213ENST00000567813 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
EDC3-213ENST00000567813 PTPRTO14522 1441 aa9.45□□□□□ -0.9
EDC3-213ENST00000567813 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
EDC3-213ENST00000567813 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
EDC3-213ENST00000567813 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
EDC3-213ENST00000567813 MAST1Q9Y2H9 1570 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 CCDC141Q6ZP82 1450 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 LRRC9Q6ZRR7 1453 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
EDC3-213ENST00000567813 HNRNPMP52272 730 aaKnown RBP eCLIP9.43□□□□□ -0.9
EDC3-213ENST00000567813 HSPA2P54652 639 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 MLECQ14165 292 aa9.43□□□□□ -0.9
EDC3-213ENST00000567813 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
EDC3-213ENST00000567813 PTPRKQ15262 1439 aa9.42□□□□□ -0.9
EDC3-213ENST00000567813 ZMYM3Q14202 1370 aa9.42□□□□□ -0.9
EDC3-213ENST00000567813 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
EDC3-213ENST00000567813 CAMSAP2Q08AD1 1489 aa9.41□□□□□ -0.9
EDC3-213ENST00000567813 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
EDC3-213ENST00000567813 MIA2Q96PC5 1412 aa9.41□□□□□ -0.9
EDC3-213ENST00000567813 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
EDC3-213ENST00000567813 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
EDC3-213ENST00000567813 TCOF1Q13428 1488 aaKnown RBP9.4□□□□□ -0.9
EDC3-213ENST00000567813 LTBP4Q8N2S1 1624 aa9.39□□□□□ -0.91
EDC3-213ENST00000567813 MYO3AQ8NEV4 1616 aa9.39□□□□□ -0.91
EDC3-213ENST00000567813 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
EDC3-213ENST00000567813 CLTCQ00610 1675 aaKnown RBP9.39□□□□□ -0.91
EDC3-213ENST00000567813 KDM5DQ9BY66 1539 aa9.38□□□□□ -0.91
EDC3-213ENST00000567813 ZNF777Q9ULD5 760 aaPredicted RBP9.38□□□□□ -0.91
EDC3-213ENST00000567813 PZPP20742 1482 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms