RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 TROQ12816 1431 aaPredicted RBP32.47■■■□□ 2.79
SCAMP5-213ENST00000567535 SCAPERQ9BY12 1400 aa32.47■■■□□ 2.79
SCAMP5-213ENST00000567535 YEATS2Q9ULM3 1422 aa32.47■■■□□ 2.79
SCAMP5-213ENST00000567535 SIGLEC1Q9BZZ2 1709 aa32.44■■■□□ 2.78
SCAMP5-213ENST00000567535 RIMS1Q86UR5 1692 aaKnown RBP32.43■■■□□ 2.78
SCAMP5-213ENST00000567535 CLIP1P30622 1438 aa32.43■■■□□ 2.78
SCAMP5-213ENST00000567535 ILDR1Q86SU0 546 aaPredicted RBP32.42■■■□□ 2.78
SCAMP5-213ENST00000567535 EFCAB2Q5VUJ9 269 aa32.4■■■□□ 2.78
SCAMP5-213ENST00000567535 PCF11O94913 1555 aaKnown RBP32.4■■■□□ 2.78
SCAMP5-213ENST00000567535 CASKIN1Q8WXD9 1431 aa32.37■■■□□ 2.77
SCAMP5-213ENST00000567535 ARHGAP5Q13017 1502 aa32.36■■■□□ 2.77
SCAMP5-213ENST00000567535 CCDC18Q5T9S5 1454 aa32.35■■■□□ 2.77
SCAMP5-213ENST00000567535 ZNF518AQ6AHZ1 1483 aa32.32■■■□□ 2.76
SCAMP5-213ENST00000567535 LMTK3Q96Q04 1460 aa32.31■■■□□ 2.76
SCAMP5-213ENST00000567535 KDM5CP41229 1560 aa32.3■■■□□ 2.76
SCAMP5-213ENST00000567535 ATP10AO60312 1499 aa32.29■■■□□ 2.76
SCAMP5-213ENST00000567535 CDC42BPBQ9Y5S2 1711 aa32.29■■■□□ 2.76
SCAMP5-213ENST00000567535 C9orf84Q5VXU9 1444 aa32.28■■■□□ 2.76
SCAMP5-213ENST00000567535 PREX2Q70Z35 1606 aa32.27■■■□□ 2.76
SCAMP5-213ENST00000567535 FYCO1Q9BQS8 1478 aa32.27■■■□□ 2.76
SCAMP5-213ENST00000567535 FER1L4A9Z1Z3 1794 aa32.27■■■□□ 2.76
SCAMP5-213ENST00000567535 ARHGEF12Q9NZN5 1544 aa32.22■■■□□ 2.75
SCAMP5-213ENST00000567535 MLECQ14165 292 aa32.2■■■□□ 2.75
SCAMP5-213ENST00000567535 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
SCAMP5-213ENST00000567535 ABCC1P33527 1531 aa32.19■■■□□ 2.74
SCAMP5-213ENST00000567535 DIP2CQ9Y2E4 1556 aa32.16■■■□□ 2.74
SCAMP5-213ENST00000567535 CDC42BPAQ5VT25 1732 aa32.15■■■□□ 2.74
SCAMP5-213ENST00000567535 ITSN2Q9NZM3 1697 aa32.15■■■□□ 2.74
SCAMP5-213ENST00000567535 REREQ9P2R6 1566 aa32.14■■■□□ 2.74
SCAMP5-213ENST00000567535 PLPPR3Q6T4P5 718 aa32.13■■■□□ 2.73
SCAMP5-213ENST00000567535 MLH3Q9UHC1 1453 aa32.13■■■□□ 2.73
SCAMP5-213ENST00000567535 ABCA6Q8N139 1617 aa32.12■■■□□ 2.73
SCAMP5-213ENST00000567535 TRAPPC8Q9Y2L5 1435 aa32.1■■■□□ 2.73
SCAMP5-213ENST00000567535 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
SCAMP5-213ENST00000567535 HSPA2P54652 639 aa32.05■■■□□ 2.72
SCAMP5-213ENST00000567535 PREX1Q8TCU6 1659 aa32.02■■■□□ 2.72
SCAMP5-213ENST00000567535 KIDINS220Q9ULH0 1771 aa32.02■■■□□ 2.72
SCAMP5-213ENST00000567535 AGLP35573 1532 aa32.01■■■□□ 2.72
SCAMP5-213ENST00000567535 SAMD9LQ8IVG5 1584 aa32.01■■■□□ 2.71
SCAMP5-213ENST00000567535 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
SCAMP5-213ENST00000567535 FBXO41Q8TF61 875 aa31.97■■■□□ 2.71
SCAMP5-213ENST00000567535 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
SCAMP5-213ENST00000567535 CEBPAP49715 358 aaPredicted RBP31.94■■■□□ 2.7
SCAMP5-213ENST00000567535 ZNF777Q9ULD5 760 aaPredicted RBP31.92■■■□□ 2.7
SCAMP5-213ENST00000567535 MTUS2Q5JR59 1369 aa31.9■■■□□ 2.7
SCAMP5-213ENST00000567535 C3P01024 1663 aa31.89■■■□□ 2.7
SCAMP5-213ENST00000567535 CCNB3Q8WWL7 1395 aa31.88■■■□□ 2.69
SCAMP5-213ENST00000567535 KIAA1107Q9UPP5 1409 aa31.88■■■□□ 2.69
SCAMP5-213ENST00000567535 PLEKHH2Q8IVE3 1493 aa31.88■■■□□ 2.69
SCAMP5-213ENST00000567535 CEP162Q5TB80 1403 aa31.85■■■□□ 2.69
SCAMP5-213ENST00000567535 CFDP1Q9UEE9 299 aaPredicted RBP31.85■■■□□ 2.69
SCAMP5-213ENST00000567535 EHBP1L1Q8N3D4 1523 aa31.85■■■□□ 2.69
SCAMP5-213ENST00000567535 UHRF1BP1Q6BDS2 1440 aa31.84■■■□□ 2.69
SCAMP5-213ENST00000567535 INO80Q9ULG1 1556 aaPredicted RBP31.84■■■□□ 2.69
SCAMP5-213ENST00000567535 ATP7AQ04656 1500 aa31.84■■■□□ 2.69
SCAMP5-213ENST00000567535 SPAG9O60271 1321 aaKnown RBP31.83■■■□□ 2.69
SCAMP5-213ENST00000567535 HNRNPMP52272 730 aaKnown RBP eCLIP31.83■■■□□ 2.69
SCAMP5-213ENST00000567535 SETD1BQ9UPS6 1966 aaKnown RBP31.83■■■□□ 2.69
SCAMP5-213ENST00000567535 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
SCAMP5-213ENST00000567535 ESF1Q9H501 851 aaKnown RBP31.81■■■□□ 2.68
SCAMP5-213ENST00000567535 CNTLNQ9NXG0 1405 aa31.81■■■□□ 2.68
SCAMP5-213ENST00000567535 PLXNC1O60486 1568 aa31.77■■■□□ 2.68
SCAMP5-213ENST00000567535 SUPT6HQ7KZ85 1726 aaKnown RBP31.76■■■□□ 2.67
SCAMP5-213ENST00000567535 MROH2AA6NES4 1674 aa31.76■■■□□ 2.67
SCAMP5-213ENST00000567535 STRCQ7RTU9 1775 aa31.76■■■□□ 2.67
SCAMP5-213ENST00000567535 A2MP01023 1474 aa31.72■■■□□ 2.67
SCAMP5-213ENST00000567535 ADGBQ8N7X0 1667 aa31.68■■■□□ 2.66
SCAMP5-213ENST00000567535 MBD5Q9P267 1494 aa31.68■■■□□ 2.66
SCAMP5-213ENST00000567535 ZNF644Q9H582 1327 aaPredicted RBP31.67■■■□□ 2.66
SCAMP5-213ENST00000567535 CERKQ8TCT0 537 aa31.66■■■□□ 2.66
SCAMP5-213ENST00000567535 DMRT2Q9Y5R5 561 aa31.66■■■□□ 2.66
SCAMP5-213ENST00000567535 NPATQ14207 1427 aa31.66■■■□□ 2.66
SCAMP5-213ENST00000567535 CLTCQ00610 1675 aaKnown RBP31.64■■■□□ 2.65
SCAMP5-213ENST00000567535 ZMYM3Q14202 1370 aa31.62■■■□□ 2.65
SCAMP5-213ENST00000567535 NCOA2Q15596 1464 aa31.62■■■□□ 2.65
SCAMP5-213ENST00000567535 RTEL1-TNFRSF6BF6WH68 1400 aa31.6■■■□□ 2.65
SCAMP5-213ENST00000567535 PTPRTO14522 1441 aa31.58■■■□□ 2.65
SCAMP5-213ENST00000567535 CAMSAP2Q08AD1 1489 aa31.56■■■□□ 2.64
SCAMP5-213ENST00000567535 NCOA1Q15788 1441 aa31.56■■■□□ 2.64
SCAMP5-213ENST00000567535 CCDC141Q6ZP82 1450 aa31.54■■■□□ 2.64
SCAMP5-213ENST00000567535 VPS8Q8N3P4 1428 aa31.53■■■□□ 2.64
SCAMP5-213ENST00000567535 GGT6Q6P531 493 aa31.53■■■□□ 2.64
SCAMP5-213ENST00000567535 MYO3AQ8NEV4 1616 aa31.52■■■□□ 2.64
SCAMP5-213ENST00000567535 ZNF142P52746 1687 aaPredicted RBP31.51■■■□□ 2.64
SCAMP5-213ENST00000567535 PPP6R1Q9UPN7 881 aa31.51■■■□□ 2.63
SCAMP5-213ENST00000567535 PTPRKQ15262 1439 aa31.5■■■□□ 2.63
SCAMP5-213ENST00000567535 CAMSAP1Q5T5Y3 1602 aa31.5■■■□□ 2.63
SCAMP5-213ENST00000567535 DHX29Q7Z478 1369 aaKnown RBP31.49■■■□□ 2.63
SCAMP5-213ENST00000567535 LRRC9Q6ZRR7 1453 aa31.46■■■□□ 2.63
SCAMP5-213ENST00000567535 ARHGEF5Q12774 1597 aa31.46■■■□□ 2.63
SCAMP5-213ENST00000567535 RSPH4AQ5TD94 716 aa31.45■■■□□ 2.63
SCAMP5-213ENST00000567535 CEP170BQ9Y4F5 1589 aaPredicted RBP31.44■■■□□ 2.62
SCAMP5-213ENST00000567535 LOC105371045A0A1W2PR82 267 aa31.44■■■□□ 2.62
SCAMP5-213ENST00000567535 FAM135AQ9P2D6 1515 aa31.4■■■□□ 2.62
SCAMP5-213ENST00000567535 LTBP4Q8N2S1 1624 aa31.4■■■□□ 2.62
SCAMP5-213ENST00000567535 PLA2R1Q13018 1463 aa31.4■■■□□ 2.62
SCAMP5-213ENST00000567535 MAP3K1Q13233 1512 aa31.39■■■□□ 2.62
SCAMP5-213ENST00000567535 KDM5DQ9BY66 1539 aa31.37■■■□□ 2.61
SCAMP5-213ENST00000567535 KIF3BO15066 747 aa31.35■■■□□ 2.61
SCAMP5-213ENST00000567535 TCOF1Q13428 1488 aaKnown RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms