RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 EFCAB2Q5VUJ9 269 aa29.29■■■□□ 2.28
RBFOX1-217ENST00000567470 ZFYVE16Q7Z3T8 1539 aa29.28■■■□□ 2.28
RBFOX1-217ENST00000567470 ARID4BQ4LE39 1312 aaPredicted RBP29.26■■■□□ 2.27
RBFOX1-217ENST00000567470 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
RBFOX1-217ENST00000567470 BCORL1Q5H9F3 1711 aa29.24■■■□□ 2.27
RBFOX1-217ENST00000567470 MAGI2Q86UL8 1455 aa29.23■■■□□ 2.27
RBFOX1-217ENST00000567470 YEATS2Q9ULM3 1422 aa29.22■■■□□ 2.27
RBFOX1-217ENST00000567470 PREX2Q70Z35 1606 aa29.22■■■□□ 2.27
RBFOX1-217ENST00000567470 CEP162Q5TB80 1403 aa29.2■■■□□ 2.27
RBFOX1-217ENST00000567470 CDC42BPBQ9Y5S2 1711 aa29.2■■■□□ 2.27
RBFOX1-217ENST00000567470 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
RBFOX1-217ENST00000567470 MADDQ8WXG6 1647 aa29.17■■■□□ 2.26
RBFOX1-217ENST00000567470 ZNF518AQ6AHZ1 1483 aa29.17■■■□□ 2.26
RBFOX1-217ENST00000567470 PTPRMP28827 1452 aa29.15■■■□□ 2.26
RBFOX1-217ENST00000567470 CDC42BPAQ5VT25 1732 aa29.14■■■□□ 2.25
RBFOX1-217ENST00000567470 SIGLEC1Q9BZZ2 1709 aa29.13■■■□□ 2.25
RBFOX1-217ENST00000567470 KDM5CP41229 1560 aa29.12■■■□□ 2.25
RBFOX1-217ENST00000567470 ABCC1P33527 1531 aa29.11■■■□□ 2.25
RBFOX1-217ENST00000567470 RIMS1Q86UR5 1692 aaKnown RBP29.08■■■□□ 2.25
RBFOX1-217ENST00000567470 ATP10AO60312 1499 aa29.07■■■□□ 2.24
RBFOX1-217ENST00000567470 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
RBFOX1-217ENST00000567470 AFAP1Q8N556 730 aa29.07■■■□□ 2.24
RBFOX1-217ENST00000567470 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
RBFOX1-217ENST00000567470 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
RBFOX1-217ENST00000567470 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
RBFOX1-217ENST00000567470 MYT1LQ9UL68 1186 aa29.02■■■□□ 2.24
RBFOX1-217ENST00000567470 GPATCH8Q9UKJ3 1502 aaKnown RBP29.02■■■□□ 2.24
RBFOX1-217ENST00000567470 TRAPPC8Q9Y2L5 1435 aa29.02■■■□□ 2.24
RBFOX1-217ENST00000567470 EHBP1L1Q8N3D4 1523 aa29■■■□□ 2.23
RBFOX1-217ENST00000567470 MLECQ14165 292 aa29■■■□□ 2.23
RBFOX1-217ENST00000567470 SAMD9LQ8IVG5 1584 aa29■■■□□ 2.23
RBFOX1-217ENST00000567470 DIP2CQ9Y2E4 1556 aa29■■■□□ 2.23
RBFOX1-217ENST00000567470 LOC105371045A0A1W2PR82 267 aa28.99■■■□□ 2.23
RBFOX1-217ENST00000567470 ZNF777Q9ULD5 760 aaPredicted RBP28.99■■■□□ 2.23
RBFOX1-217ENST00000567470 MLH3Q9UHC1 1453 aa28.98■■■□□ 2.23
RBFOX1-217ENST00000567470 CCNB3Q8WWL7 1395 aa28.98■■■□□ 2.23
RBFOX1-217ENST00000567470 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
RBFOX1-217ENST00000567470 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
RBFOX1-217ENST00000567470 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
RBFOX1-217ENST00000567470 REREQ9P2R6 1566 aa28.92■■■□□ 2.22
RBFOX1-217ENST00000567470 CFDP1Q9UEE9 299 aaPredicted RBP28.92■■■□□ 2.22
RBFOX1-217ENST00000567470 TIAM1Q13009 1591 aa28.92■■■□□ 2.22
RBFOX1-217ENST00000567470 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
RBFOX1-217ENST00000567470 KIDINS220Q9ULH0 1771 aa28.9■■■□□ 2.22
RBFOX1-217ENST00000567470 PLEKHH2Q8IVE3 1493 aa28.9■■■□□ 2.22
RBFOX1-217ENST00000567470 VPS8Q8N3P4 1428 aa28.87■■■□□ 2.21
RBFOX1-217ENST00000567470 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
RBFOX1-217ENST00000567470 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.21
RBFOX1-217ENST00000567470 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
RBFOX1-217ENST00000567470 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
RBFOX1-217ENST00000567470 SPAG9O60271 1321 aaKnown RBP28.82■■■□□ 2.2
RBFOX1-217ENST00000567470 AGLP35573 1532 aa28.82■■■□□ 2.2
RBFOX1-217ENST00000567470 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
RBFOX1-217ENST00000567470 NCOA2Q15596 1464 aa28.79■■■□□ 2.2
RBFOX1-217ENST00000567470 INO80Q9ULG1 1556 aaPredicted RBP28.79■■■□□ 2.2
RBFOX1-217ENST00000567470 ZNF644Q9H582 1327 aaPredicted RBP28.76■■■□□ 2.19
RBFOX1-217ENST00000567470 LRRC9Q6ZRR7 1453 aa28.72■■■□□ 2.19
RBFOX1-217ENST00000567470 CEBPAP49715 358 aaPredicted RBP28.7■■■□□ 2.18
RBFOX1-217ENST00000567470 MBD5Q9P267 1494 aa28.7■■■□□ 2.18
RBFOX1-217ENST00000567470 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
RBFOX1-217ENST00000567470 ESF1Q9H501 851 aaKnown RBP28.68■■■□□ 2.18
RBFOX1-217ENST00000567470 PREX1Q8TCU6 1659 aa28.67■■■□□ 2.18
RBFOX1-217ENST00000567470 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
RBFOX1-217ENST00000567470 A2MP01023 1474 aa28.67■■■□□ 2.18
RBFOX1-217ENST00000567470 MAP3K1Q13233 1512 aa28.67■■■□□ 2.18
RBFOX1-217ENST00000567470 HSPA2P54652 639 aa28.66■■■□□ 2.18
RBFOX1-217ENST00000567470 C3P01024 1663 aa28.65■■■□□ 2.18
RBFOX1-217ENST00000567470 ADGBQ8N7X0 1667 aa28.64■■■□□ 2.18
RBFOX1-217ENST00000567470 CCDC141Q6ZP82 1450 aa28.63■■■□□ 2.17
RBFOX1-217ENST00000567470 CNTLNQ9NXG0 1405 aa28.62■■■□□ 2.17
RBFOX1-217ENST00000567470 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
RBFOX1-217ENST00000567470 RTEL1-TNFRSF6BF6WH68 1400 aa28.59■■■□□ 2.17
RBFOX1-217ENST00000567470 UHRF1BP1Q6BDS2 1440 aa28.57■■■□□ 2.16
RBFOX1-217ENST00000567470 MROH2AA6NES4 1674 aa28.56■■■□□ 2.16
RBFOX1-217ENST00000567470 ARHGEF5Q12774 1597 aa28.55■■■□□ 2.16
RBFOX1-217ENST00000567470 ILDR1Q86SU0 546 aaPredicted RBP28.53■■■□□ 2.16
RBFOX1-217ENST00000567470 CLTCQ00610 1675 aaKnown RBP28.52■■■□□ 2.16
RBFOX1-217ENST00000567470 RSPH4AQ5TD94 716 aa28.51■■■□□ 2.15
RBFOX1-217ENST00000567470 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.15
RBFOX1-217ENST00000567470 MYOM3Q5VTT5 1437 aa28.51■■■□□ 2.15
RBFOX1-217ENST00000567470 APLP2Q06481 763 aa28.5■■■□□ 2.15
RBFOX1-217ENST00000567470 GGT6Q6P531 493 aa28.5■■■□□ 2.15
RBFOX1-217ENST00000567470 DHX29Q7Z478 1369 aaKnown RBP28.48■■■□□ 2.15
RBFOX1-217ENST00000567470 ZMYM3Q14202 1370 aa28.47■■■□□ 2.15
RBFOX1-217ENST00000567470 MIA2Q96PC5 1412 aa28.46■■■□□ 2.15
RBFOX1-217ENST00000567470 NPATQ14207 1427 aa28.45■■■□□ 2.15
RBFOX1-217ENST00000567470 TSPY4P0CV99 314 aa28.44■■■□□ 2.14
RBFOX1-217ENST00000567470 TSPY10P0CW01 314 aa28.44■■■□□ 2.14
RBFOX1-217ENST00000567470 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
RBFOX1-217ENST00000567470 PPP6R1Q9UPN7 881 aa28.4■■■□□ 2.14
RBFOX1-217ENST00000567470 KIF3BO15066 747 aa28.39■■■□□ 2.14
RBFOX1-217ENST00000567470 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
RBFOX1-217ENST00000567470 PTPRKQ15262 1439 aa28.35■■■□□ 2.13
RBFOX1-217ENST00000567470 MYO3AQ8NEV4 1616 aa28.35■■■□□ 2.13
RBFOX1-217ENST00000567470 KDM5DQ9BY66 1539 aa28.34■■■□□ 2.13
RBFOX1-217ENST00000567470 PTPN23Q9H3S7 1636 aa28.34■■■□□ 2.13
RBFOX1-217ENST00000567470 FAM135AQ9P2D6 1515 aa28.33■■■□□ 2.13
RBFOX1-217ENST00000567470 ZNF142P52746 1687 aaPredicted RBP28.3■■■□□ 2.12
RBFOX1-217ENST00000567470 CROCC2H7BZ55 1655 aa28.29■■■□□ 2.12
RBFOX1-217ENST00000567470 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms