RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 CEP162Q5TB80 1403 aa12.24□□□□□ -0.45
GINS3-207ENST00000567400 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
GINS3-207ENST00000567400 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
GINS3-207ENST00000567400 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
GINS3-207ENST00000567400 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
GINS3-207ENST00000567400 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
GINS3-207ENST00000567400 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.45
GINS3-207ENST00000567400 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
GINS3-207ENST00000567400 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
GINS3-207ENST00000567400 KDM5CP41229 1560 aa12.2□□□□□ -0.46
GINS3-207ENST00000567400 MAGI2Q86UL8 1455 aa12.2□□□□□ -0.46
GINS3-207ENST00000567400 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
GINS3-207ENST00000567400 ABCC1P33527 1531 aa12.19□□□□□ -0.46
GINS3-207ENST00000567400 ARHGEF12Q9NZN5 1544 aa12.19□□□□□ -0.46
GINS3-207ENST00000567400 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
GINS3-207ENST00000567400 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
GINS3-207ENST00000567400 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
GINS3-207ENST00000567400 PTPRMP28827 1452 aa12.16□□□□□ -0.46
GINS3-207ENST00000567400 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
GINS3-207ENST00000567400 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
GINS3-207ENST00000567400 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
GINS3-207ENST00000567400 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
GINS3-207ENST00000567400 TRAPPC8Q9Y2L5 1435 aa12.15□□□□□ -0.46
GINS3-207ENST00000567400 AFAP1Q8N556 730 aa12.15□□□□□ -0.46
GINS3-207ENST00000567400 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
GINS3-207ENST00000567400 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
GINS3-207ENST00000567400 ABCA6Q8N139 1617 aa12.13□□□□□ -0.47
GINS3-207ENST00000567400 ATP10AO60312 1499 aa12.13□□□□□ -0.47
GINS3-207ENST00000567400 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
GINS3-207ENST00000567400 RIMS1Q86UR5 1692 aaKnown RBP12.13□□□□□ -0.47
GINS3-207ENST00000567400 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
GINS3-207ENST00000567400 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
GINS3-207ENST00000567400 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
GINS3-207ENST00000567400 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
GINS3-207ENST00000567400 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
GINS3-207ENST00000567400 KIDINS220Q9ULH0 1771 aa12.1□□□□□ -0.47
GINS3-207ENST00000567400 REREQ9P2R6 1566 aa12.1□□□□□ -0.47
GINS3-207ENST00000567400 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
GINS3-207ENST00000567400 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
GINS3-207ENST00000567400 CCNB3Q8WWL7 1395 aa12.08□□□□□ -0.48
GINS3-207ENST00000567400 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
GINS3-207ENST00000567400 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
GINS3-207ENST00000567400 INO80Q9ULG1 1556 aaPredicted RBP12.06□□□□□ -0.48
GINS3-207ENST00000567400 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
GINS3-207ENST00000567400 MLECQ14165 292 aa12.05□□□□□ -0.48
GINS3-207ENST00000567400 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
GINS3-207ENST00000567400 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
GINS3-207ENST00000567400 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
GINS3-207ENST00000567400 AGLP35573 1532 aa12.05□□□□□ -0.48
GINS3-207ENST00000567400 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
GINS3-207ENST00000567400 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
GINS3-207ENST00000567400 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
GINS3-207ENST00000567400 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
GINS3-207ENST00000567400 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
GINS3-207ENST00000567400 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
GINS3-207ENST00000567400 PLXNC1O60486 1568 aa12.02□□□□□ -0.49
GINS3-207ENST00000567400 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
GINS3-207ENST00000567400 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
GINS3-207ENST00000567400 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
GINS3-207ENST00000567400 SPAG9O60271 1321 aaKnown RBP12□□□□□ -0.49
GINS3-207ENST00000567400 CAMSAP2Q08AD1 1489 aa12□□□□□ -0.49
GINS3-207ENST00000567400 C3P01024 1663 aa11.97□□□□□ -0.49
GINS3-207ENST00000567400 A2MP01023 1474 aa11.97□□□□□ -0.49
GINS3-207ENST00000567400 CEBPAP49715 358 aaPredicted RBP11.97□□□□□ -0.49
GINS3-207ENST00000567400 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
GINS3-207ENST00000567400 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
GINS3-207ENST00000567400 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
GINS3-207ENST00000567400 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
GINS3-207ENST00000567400 RTEL1-TNFRSF6BF6WH68 1400 aa11.95□□□□□ -0.5
GINS3-207ENST00000567400 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
GINS3-207ENST00000567400 HSPA2P54652 639 aa11.94□□□□□ -0.5
GINS3-207ENST00000567400 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
GINS3-207ENST00000567400 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
GINS3-207ENST00000567400 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
GINS3-207ENST00000567400 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
GINS3-207ENST00000567400 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
GINS3-207ENST00000567400 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.5
GINS3-207ENST00000567400 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
GINS3-207ENST00000567400 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
GINS3-207ENST00000567400 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
GINS3-207ENST00000567400 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
GINS3-207ENST00000567400 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
GINS3-207ENST00000567400 NPATQ14207 1427 aa11.87□□□□□ -0.51
GINS3-207ENST00000567400 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
GINS3-207ENST00000567400 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
GINS3-207ENST00000567400 GGT6Q6P531 493 aa11.86□□□□□ -0.51
GINS3-207ENST00000567400 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
GINS3-207ENST00000567400 ESF1Q9H501 851 aaKnown RBP11.86□□□□□ -0.51
GINS3-207ENST00000567400 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
GINS3-207ENST00000567400 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
GINS3-207ENST00000567400 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
GINS3-207ENST00000567400 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
GINS3-207ENST00000567400 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
GINS3-207ENST00000567400 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
GINS3-207ENST00000567400 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
GINS3-207ENST00000567400 ABCC5O15440 1437 aa11.84□□□□□ -0.51
GINS3-207ENST00000567400 ZNF142P52746 1687 aaPredicted RBP11.84□□□□□ -0.51
GINS3-207ENST00000567400 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
GINS3-207ENST00000567400 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
GINS3-207ENST00000567400 KIF3BO15066 747 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms