RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
PKD1-233ENST00000567355 CDC42BPBQ9Y5S2 1711 aa26.72■■□□□ 1.87
PKD1-233ENST00000567355 PREX2Q70Z35 1606 aa26.7■■□□□ 1.86
PKD1-233ENST00000567355 ARHGAP5Q13017 1502 aa26.7■■□□□ 1.86
PKD1-233ENST00000567355 MAGI2Q86UL8 1455 aa26.69■■□□□ 1.86
PKD1-233ENST00000567355 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
PKD1-233ENST00000567355 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
PKD1-233ENST00000567355 ADAMTSL3P82987 1691 aa26.65■■□□□ 1.86
PKD1-233ENST00000567355 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
PKD1-233ENST00000567355 YEATS2Q9ULM3 1422 aa26.64■■□□□ 1.85
PKD1-233ENST00000567355 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
PKD1-233ENST00000567355 KDM5CP41229 1560 aa26.61■■□□□ 1.85
PKD1-233ENST00000567355 ZNF518AQ6AHZ1 1483 aa26.61■■□□□ 1.85
PKD1-233ENST00000567355 ABCC1P33527 1531 aa26.6■■□□□ 1.85
PKD1-233ENST00000567355 SIGLEC1Q9BZZ2 1709 aa26.59■■□□□ 1.85
PKD1-233ENST00000567355 ARHGEF12Q9NZN5 1544 aa26.58■■□□□ 1.85
PKD1-233ENST00000567355 GPATCH8Q9UKJ3 1502 aaKnown RBP26.58■■□□□ 1.85
PKD1-233ENST00000567355 ITSN2Q9NZM3 1697 aa26.54■■□□□ 1.84
PKD1-233ENST00000567355 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
PKD1-233ENST00000567355 MTUS2Q5JR59 1369 aa26.54■■□□□ 1.84
PKD1-233ENST00000567355 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
PKD1-233ENST00000567355 ATP10AO60312 1499 aa26.52■■□□□ 1.84
PKD1-233ENST00000567355 SAMD9LQ8IVG5 1584 aa26.51■■□□□ 1.83
PKD1-233ENST00000567355 VPS8Q8N3P4 1428 aa26.51■■□□□ 1.83
PKD1-233ENST00000567355 TRAPPC8Q9Y2L5 1435 aa26.51■■□□□ 1.83
PKD1-233ENST00000567355 ARID4BQ4LE39 1312 aaPredicted RBP26.51■■□□□ 1.83
PKD1-233ENST00000567355 MADDQ8WXG6 1647 aa26.5■■□□□ 1.83
PKD1-233ENST00000567355 HECW2Q9P2P5 1572 aa26.5■■□□□ 1.83
PKD1-233ENST00000567355 MLH3Q9UHC1 1453 aa26.5■■□□□ 1.83
PKD1-233ENST00000567355 PTPRMP28827 1452 aa26.49■■□□□ 1.83
PKD1-233ENST00000567355 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
PKD1-233ENST00000567355 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
PKD1-233ENST00000567355 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
PKD1-233ENST00000567355 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
PKD1-233ENST00000567355 REREQ9P2R6 1566 aa26.45■■□□□ 1.82
PKD1-233ENST00000567355 ABCA6Q8N139 1617 aa26.43■■□□□ 1.82
PKD1-233ENST00000567355 KIAA1107Q9UPP5 1409 aa26.43■■□□□ 1.82
PKD1-233ENST00000567355 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
PKD1-233ENST00000567355 KIDINS220Q9ULH0 1771 aa26.41■■□□□ 1.82
PKD1-233ENST00000567355 CFDP1Q9UEE9 299 aaPredicted RBP26.41■■□□□ 1.82
PKD1-233ENST00000567355 PLEKHH2Q8IVE3 1493 aa26.4■■□□□ 1.82
PKD1-233ENST00000567355 RIMS1Q86UR5 1692 aaKnown RBP26.39■■□□□ 1.82
PKD1-233ENST00000567355 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
PKD1-233ENST00000567355 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
PKD1-233ENST00000567355 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
PKD1-233ENST00000567355 NCOA2Q15596 1464 aa26.37■■□□□ 1.81
PKD1-233ENST00000567355 HNRNPMP52272 730 aaKnown RBP eCLIP26.35■■□□□ 1.81
PKD1-233ENST00000567355 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
PKD1-233ENST00000567355 AGLP35573 1532 aa26.34■■□□□ 1.81
PKD1-233ENST00000567355 FER1L4A9Z1Z3 1794 aa26.33■■□□□ 1.81
PKD1-233ENST00000567355 MBD5Q9P267 1494 aa26.31■■□□□ 1.8
PKD1-233ENST00000567355 INO80Q9ULG1 1556 aaPredicted RBP26.31■■□□□ 1.8
PKD1-233ENST00000567355 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
PKD1-233ENST00000567355 MLECQ14165 292 aa26.3■■□□□ 1.8
PKD1-233ENST00000567355 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
PKD1-233ENST00000567355 SPAG9O60271 1321 aaKnown RBP26.28■■□□□ 1.8
PKD1-233ENST00000567355 ATP7AQ04656 1500 aa26.28■■□□□ 1.8
PKD1-233ENST00000567355 KANK4Q5T7N3 995 aaPredicted RBP26.25■■□□□ 1.79
PKD1-233ENST00000567355 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
PKD1-233ENST00000567355 PLXNC1O60486 1568 aa26.22■■□□□ 1.79
PKD1-233ENST00000567355 LMTK3Q96Q04 1460 aa26.22■■□□□ 1.79
PKD1-233ENST00000567355 RTEL1-TNFRSF6BF6WH68 1400 aa26.19■■□□□ 1.78
PKD1-233ENST00000567355 A2MP01023 1474 aa26.17■■□□□ 1.78
PKD1-233ENST00000567355 CCDC141Q6ZP82 1450 aa26.16■■□□□ 1.78
PKD1-233ENST00000567355 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
PKD1-233ENST00000567355 ADGBQ8N7X0 1667 aa26.15■■□□□ 1.78
PKD1-233ENST00000567355 RSPH4AQ5TD94 716 aa26.14■■□□□ 1.78
PKD1-233ENST00000567355 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
PKD1-233ENST00000567355 MIA2Q96PC5 1412 aa26.12■■□□□ 1.77
PKD1-233ENST00000567355 C3P01024 1663 aa26.1■■□□□ 1.77
PKD1-233ENST00000567355 CEBPAP49715 358 aaPredicted RBP26.1■■□□□ 1.77
PKD1-233ENST00000567355 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
PKD1-233ENST00000567355 PLPPR3Q6T4P5 718 aa26.09■■□□□ 1.77
PKD1-233ENST00000567355 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
PKD1-233ENST00000567355 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
PKD1-233ENST00000567355 DHX29Q7Z478 1369 aaKnown RBP26.06■■□□□ 1.76
PKD1-233ENST00000567355 APLP2Q06481 763 aa26.04■■□□□ 1.76
PKD1-233ENST00000567355 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
PKD1-233ENST00000567355 SETD1BQ9UPS6 1966 aaKnown RBP26■■□□□ 1.75
PKD1-233ENST00000567355 ESF1Q9H501 851 aaKnown RBP26■■□□□ 1.75
PKD1-233ENST00000567355 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
PKD1-233ENST00000567355 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
PKD1-233ENST00000567355 HSPA2P54652 639 aa25.98■■□□□ 1.75
PKD1-233ENST00000567355 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
PKD1-233ENST00000567355 CLTCQ00610 1675 aaKnown RBP25.98■■□□□ 1.75
PKD1-233ENST00000567355 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
PKD1-233ENST00000567355 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
PKD1-233ENST00000567355 GGT6Q6P531 493 aa25.95■■□□□ 1.74
PKD1-233ENST00000567355 TCOF1Q13428 1488 aaKnown RBP25.94■■□□□ 1.74
PKD1-233ENST00000567355 NPATQ14207 1427 aa25.94■■□□□ 1.74
PKD1-233ENST00000567355 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
PKD1-233ENST00000567355 FGD6Q6ZV73 1430 aa25.93■■□□□ 1.74
PKD1-233ENST00000567355 CROCC2H7BZ55 1655 aa25.9■■□□□ 1.74
PKD1-233ENST00000567355 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
PKD1-233ENST00000567355 ABCC5O15440 1437 aa25.89■■□□□ 1.74
PKD1-233ENST00000567355 KIF3BO15066 747 aa25.89■■□□□ 1.74
PKD1-233ENST00000567355 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.73
PKD1-233ENST00000567355 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
PKD1-233ENST00000567355 DNMT1P26358 1616 aaKnown RBP25.87■■□□□ 1.73
PKD1-233ENST00000567355 RNF17Q9BXT8 1623 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms