RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SCAPERQ9BY12 1400 aa30.25■■■□□ 2.43
IFT140-208ENST00000566818 MAGI2Q86UL8 1455 aa30.23■■■□□ 2.43
IFT140-208ENST00000566818 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
IFT140-208ENST00000566818 ZFYVE16Q7Z3T8 1539 aa30.22■■■□□ 2.43
IFT140-208ENST00000566818 PREX2Q70Z35 1606 aa30.2■■■□□ 2.43
IFT140-208ENST00000566818 ARID4BQ4LE39 1312 aaPredicted RBP30.18■■■□□ 2.42
IFT140-208ENST00000566818 BCORL1Q5H9F3 1711 aa30.16■■■□□ 2.42
IFT140-208ENST00000566818 ADAMTSL3P82987 1691 aa30.16■■■□□ 2.42
IFT140-208ENST00000566818 CDC42BPBQ9Y5S2 1711 aa30.16■■■□□ 2.42
IFT140-208ENST00000566818 ZNF518AQ6AHZ1 1483 aa30.14■■■□□ 2.42
IFT140-208ENST00000566818 YEATS2Q9ULM3 1422 aa30.13■■■□□ 2.41
IFT140-208ENST00000566818 CDC42BPAQ5VT25 1732 aa30.09■■■□□ 2.41
IFT140-208ENST00000566818 KDM5CP41229 1560 aa30.08■■■□□ 2.41
IFT140-208ENST00000566818 ABCC1P33527 1531 aa30.07■■■□□ 2.4
IFT140-208ENST00000566818 MADDQ8WXG6 1647 aa30.07■■■□□ 2.4
IFT140-208ENST00000566818 MTUS2Q5JR59 1369 aa30.06■■■□□ 2.4
IFT140-208ENST00000566818 PTPRMP28827 1452 aa30.05■■■□□ 2.4
IFT140-208ENST00000566818 HECW2Q9P2P5 1572 aa30.03■■■□□ 2.4
IFT140-208ENST00000566818 ITSN2Q9NZM3 1697 aa30.03■■■□□ 2.4
IFT140-208ENST00000566818 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
IFT140-208ENST00000566818 ATP10AO60312 1499 aa30.02■■■□□ 2.4
IFT140-208ENST00000566818 EHBP1L1Q8N3D4 1523 aa30.01■■■□□ 2.4
IFT140-208ENST00000566818 SIGLEC1Q9BZZ2 1709 aa29.99■■■□□ 2.39
IFT140-208ENST00000566818 GPATCH8Q9UKJ3 1502 aaKnown RBP29.98■■■□□ 2.39
IFT140-208ENST00000566818 AFAP1Q8N556 730 aa29.98■■■□□ 2.39
IFT140-208ENST00000566818 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
IFT140-208ENST00000566818 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
IFT140-208ENST00000566818 RIMS1Q86UR5 1692 aaKnown RBP29.97■■■□□ 2.39
IFT140-208ENST00000566818 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
IFT140-208ENST00000566818 MLH3Q9UHC1 1453 aa29.95■■■□□ 2.39
IFT140-208ENST00000566818 SAMD9LQ8IVG5 1584 aa29.94■■■□□ 2.38
IFT140-208ENST00000566818 LOC105371045A0A1W2PR82 267 aa29.94■■■□□ 2.38
IFT140-208ENST00000566818 TRAPPC8Q9Y2L5 1435 aa29.94■■■□□ 2.38
IFT140-208ENST00000566818 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
IFT140-208ENST00000566818 ZNF777Q9ULD5 760 aaPredicted RBP29.92■■■□□ 2.38
IFT140-208ENST00000566818 PLEKHH2Q8IVE3 1493 aa29.91■■■□□ 2.38
IFT140-208ENST00000566818 SYCP2Q9BX26 1530 aa29.91■■■□□ 2.38
IFT140-208ENST00000566818 REREQ9P2R6 1566 aa29.9■■■□□ 2.38
IFT140-208ENST00000566818 VPS8Q8N3P4 1428 aa29.9■■■□□ 2.38
IFT140-208ENST00000566818 ABCA6Q8N139 1617 aa29.9■■■□□ 2.38
IFT140-208ENST00000566818 FER1L4A9Z1Z3 1794 aa29.9■■■□□ 2.38
IFT140-208ENST00000566818 CFDP1Q9UEE9 299 aaPredicted RBP29.89■■■□□ 2.38
IFT140-208ENST00000566818 TIAM1Q13009 1591 aa29.89■■■□□ 2.38
IFT140-208ENST00000566818 MLECQ14165 292 aa29.87■■■□□ 2.37
IFT140-208ENST00000566818 KIAA1107Q9UPP5 1409 aa29.85■■■□□ 2.37
IFT140-208ENST00000566818 SUPT6HQ7KZ85 1726 aaKnown RBP29.84■■■□□ 2.37
IFT140-208ENST00000566818 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
IFT140-208ENST00000566818 AGLP35573 1532 aa29.78■■■□□ 2.36
IFT140-208ENST00000566818 SPAG9O60271 1321 aaKnown RBP29.77■■■□□ 2.36
IFT140-208ENST00000566818 NCOA2Q15596 1464 aa29.77■■■□□ 2.36
IFT140-208ENST00000566818 HNRNPMP52272 730 aaKnown RBP eCLIP29.77■■■□□ 2.36
IFT140-208ENST00000566818 ATP7AQ04656 1500 aa29.75■■■□□ 2.35
IFT140-208ENST00000566818 INO80Q9ULG1 1556 aaPredicted RBP29.74■■■□□ 2.35
IFT140-208ENST00000566818 PLPPR3Q6T4P5 718 aa29.72■■■□□ 2.35
IFT140-208ENST00000566818 MAP3K1Q13233 1512 aa29.71■■■□□ 2.35
IFT140-208ENST00000566818 LRRC9Q6ZRR7 1453 aa29.71■■■□□ 2.35
IFT140-208ENST00000566818 LMTK3Q96Q04 1460 aa29.71■■■□□ 2.35
IFT140-208ENST00000566818 ZNF644Q9H582 1327 aaPredicted RBP29.66■■■□□ 2.34
IFT140-208ENST00000566818 CAMSAP2Q08AD1 1489 aa29.65■■■□□ 2.34
IFT140-208ENST00000566818 MBD5Q9P267 1494 aa29.65■■■□□ 2.34
IFT140-208ENST00000566818 ESF1Q9H501 851 aaKnown RBP29.64■■■□□ 2.34
IFT140-208ENST00000566818 PLXNC1O60486 1568 aa29.62■■■□□ 2.33
IFT140-208ENST00000566818 A2MP01023 1474 aa29.61■■■□□ 2.33
IFT140-208ENST00000566818 ADGBQ8N7X0 1667 aa29.61■■■□□ 2.33
IFT140-208ENST00000566818 CCDC141Q6ZP82 1450 aa29.61■■■□□ 2.33
IFT140-208ENST00000566818 CNTLNQ9NXG0 1405 aa29.6■■■□□ 2.33
IFT140-208ENST00000566818 RTEL1-TNFRSF6BF6WH68 1400 aa29.59■■■□□ 2.33
IFT140-208ENST00000566818 PREX1Q8TCU6 1659 aa29.59■■■□□ 2.33
IFT140-208ENST00000566818 APLP2Q06481 763 aa29.55■■■□□ 2.32
IFT140-208ENST00000566818 RSPH4AQ5TD94 716 aa29.55■■■□□ 2.32
IFT140-208ENST00000566818 C3P01024 1663 aa29.55■■■□□ 2.32
IFT140-208ENST00000566818 CEBPAP49715 358 aaPredicted RBP29.54■■■□□ 2.32
IFT140-208ENST00000566818 ARHGEF5Q12774 1597 aa29.54■■■□□ 2.32
IFT140-208ENST00000566818 KANK4Q5T7N3 995 aaPredicted RBP29.52■■■□□ 2.32
IFT140-208ENST00000566818 MROH2AA6NES4 1674 aa29.52■■■□□ 2.32
IFT140-208ENST00000566818 MYOM3Q5VTT5 1437 aa29.5■■■□□ 2.31
IFT140-208ENST00000566818 UHRF1BP1Q6BDS2 1440 aa29.49■■■□□ 2.31
IFT140-208ENST00000566818 MIA2Q96PC5 1412 aa29.48■■■□□ 2.31
IFT140-208ENST00000566818 HSPA2P54652 639 aa29.48■■■□□ 2.31
IFT140-208ENST00000566818 SETD1BQ9UPS6 1966 aaKnown RBP29.44■■■□□ 2.3
IFT140-208ENST00000566818 DHX29Q7Z478 1369 aaKnown RBP29.44■■■□□ 2.3
IFT140-208ENST00000566818 TSPY4P0CV99 314 aa29.43■■■□□ 2.3
IFT140-208ENST00000566818 TSPY10P0CW01 314 aa29.43■■■□□ 2.3
IFT140-208ENST00000566818 CLTCQ00610 1675 aaKnown RBP29.43■■■□□ 2.3
IFT140-208ENST00000566818 GGT6Q6P531 493 aa29.41■■■□□ 2.3
IFT140-208ENST00000566818 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.3
IFT140-208ENST00000566818 NPATQ14207 1427 aa29.39■■■□□ 2.3
IFT140-208ENST00000566818 PPP6R1Q9UPN7 881 aa29.39■■■□□ 2.3
IFT140-208ENST00000566818 ZMYM3Q14202 1370 aa29.38■■■□□ 2.29
IFT140-208ENST00000566818 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
IFT140-208ENST00000566818 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
IFT140-208ENST00000566818 KIF3BO15066 747 aa29.31■■■□□ 2.28
IFT140-208ENST00000566818 KDM5DQ9BY66 1539 aa29.3■■■□□ 2.28
IFT140-208ENST00000566818 ILDR1Q86SU0 546 aaPredicted RBP29.28■■■□□ 2.28
IFT140-208ENST00000566818 FGD6Q6ZV73 1430 aa29.27■■■□□ 2.28
IFT140-208ENST00000566818 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.27
IFT140-208ENST00000566818 SHANK2Q9UPX8 1470 aa29.26■■■□□ 2.27
IFT140-208ENST00000566818 PTPRKQ15262 1439 aa29.26■■■□□ 2.27
IFT140-208ENST00000566818 MYO3AQ8NEV4 1616 aa29.25■■■□□ 2.27
IFT140-208ENST00000566818 EIF2AK4Q9P2K8 1649 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms