RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
NAE1-216ENST00000566663 KIF3CO14782 793 aa12.14□□□□□ -0.47
NAE1-216ENST00000566663 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
NAE1-216ENST00000566663 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
NAE1-216ENST00000566663 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
NAE1-216ENST00000566663 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
NAE1-216ENST00000566663 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
NAE1-216ENST00000566663 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
NAE1-216ENST00000566663 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
NAE1-216ENST00000566663 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
NAE1-216ENST00000566663 HOXB1P14653 301 aaPredicted RBP12.02□□□□□ -0.49
NAE1-216ENST00000566663 EMP3P54852 163 aa12.02□□□□□ -0.49
NAE1-216ENST00000566663 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
NAE1-216ENST00000566663 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
NAE1-216ENST00000566663 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
NAE1-216ENST00000566663 CRISPLD2Q9H0B8 497 aa11.98□□□□□ -0.49
NAE1-216ENST00000566663 FOXK1P85037 733 aa11.97□□□□□ -0.49
NAE1-216ENST00000566663 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
NAE1-216ENST00000566663 SLC34A2O95436 690 aa11.96□□□□□ -0.49
NAE1-216ENST00000566663 DSG2Q14126 1118 aa11.95□□□□□ -0.5
NAE1-216ENST00000566663 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
NAE1-216ENST00000566663 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
NAE1-216ENST00000566663 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
NAE1-216ENST00000566663 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
NAE1-216ENST00000566663 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
NAE1-216ENST00000566663 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
NAE1-216ENST00000566663 PDE4AP27815 886 aa11.92□□□□□ -0.5
NAE1-216ENST00000566663 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
NAE1-216ENST00000566663 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
NAE1-216ENST00000566663 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
NAE1-216ENST00000566663 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
NAE1-216ENST00000566663 KHSRPQ92945 711 aaKnown RBP eCLIP11.9□□□□□ -0.55e-9■■□□□ 13.3
NAE1-216ENST00000566663 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
NAE1-216ENST00000566663 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
NAE1-216ENST00000566663 ERBB3P21860 1342 aa11.87□□□□□ -0.51
NAE1-216ENST00000566663 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
NAE1-216ENST00000566663 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
NAE1-216ENST00000566663 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
NAE1-216ENST00000566663 MFSD10Q14728 455 aa11.85□□□□□ -0.51
NAE1-216ENST00000566663 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
NAE1-216ENST00000566663 NUDT7P0C024 238 aa11.84□□□□□ -0.51
NAE1-216ENST00000566663 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
NAE1-216ENST00000566663 DDX27Q96GQ7 796 aaKnown RBP11.84□□□□□ -0.51
NAE1-216ENST00000566663 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
NAE1-216ENST00000566663 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
NAE1-216ENST00000566663 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
NAE1-216ENST00000566663 TBC1D12O60347 775 aa11.78□□□□□ -0.52
NAE1-216ENST00000566663 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
NAE1-216ENST00000566663 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
NAE1-216ENST00000566663 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
NAE1-216ENST00000566663 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
NAE1-216ENST00000566663 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
NAE1-216ENST00000566663 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
NAE1-216ENST00000566663 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
NAE1-216ENST00000566663 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
NAE1-216ENST00000566663 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
NAE1-216ENST00000566663 SPNS2Q8IVW8 549 aa11.66□□□□□ -0.54
NAE1-216ENST00000566663 MAP3K9P80192 1104 aa11.65□□□□□ -0.54
NAE1-216ENST00000566663 EVI5O60447 810 aa11.64□□□□□ -0.55
NAE1-216ENST00000566663 PBX2P40425 430 aa11.64□□□□□ -0.55
NAE1-216ENST00000566663 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
NAE1-216ENST00000566663 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
NAE1-216ENST00000566663 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
NAE1-216ENST00000566663 POTEEQ6S8J3 1075 aa11.6□□□□□ -0.55
NAE1-216ENST00000566663 DPYSL4O14531 572 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 FOSBP53539 338 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.565e-6■■■■□ 19.4
NAE1-216ENST00000566663 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
NAE1-216ENST00000566663 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
NAE1-216ENST00000566663 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
NAE1-216ENST00000566663 E2F4Q16254 413 aa11.56□□□□□ -0.56
NAE1-216ENST00000566663 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
NAE1-216ENST00000566663 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
NAE1-216ENST00000566663 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
NAE1-216ENST00000566663 PSEN2P49810 448 aa11.5□□□□□ -0.57
NAE1-216ENST00000566663 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
NAE1-216ENST00000566663 PDIA6Q15084 440 aa11.49□□□□□ -0.57
NAE1-216ENST00000566663 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
NAE1-216ENST00000566663 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
NAE1-216ENST00000566663 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
NAE1-216ENST00000566663 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
NAE1-216ENST00000566663 PHF14O94880 888 aa11.47□□□□□ -0.57
NAE1-216ENST00000566663 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
NAE1-216ENST00000566663 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
NAE1-216ENST00000566663 PTGER2P43116 358 aa11.46□□□□□ -0.57
NAE1-216ENST00000566663 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
NAE1-216ENST00000566663 TK2O00142 265 aa11.44□□□□□ -0.58
NAE1-216ENST00000566663 PTPREP23469 700 aa11.44□□□□□ -0.58
NAE1-216ENST00000566663 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
NAE1-216ENST00000566663 ADGRD1Q6QNK2 874 aa11.44□□□□□ -0.58
NAE1-216ENST00000566663 FBXW7Q969H0 707 aa11.44□□□□□ -0.58
NAE1-216ENST00000566663 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
NAE1-216ENST00000566663 EPAS1Q99814 870 aa11.42□□□□□ -0.58
NAE1-216ENST00000566663 DDX12PQ92771 950 aa11.41□□□□□ -0.58
NAE1-216ENST00000566663 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
NAE1-216ENST00000566663 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
NAE1-216ENST00000566663 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms