RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 KIF3CO14782 793 aa17.09■□□□□ 0.33
CCP110-208ENST00000566523 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.32
CCP110-208ENST00000566523 C2orf72A6NCS6 295 aa17.04■□□□□ 0.32
CCP110-208ENST00000566523 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
CCP110-208ENST00000566523 MARVELD3Q96A59 401 aa16.98■□□□□ 0.31
CCP110-208ENST00000566523 TMC2Q8TDI7 906 aa16.97■□□□□ 0.31
CCP110-208ENST00000566523 ZNF710Q8N1W2 664 aa16.96■□□□□ 0.31
CCP110-208ENST00000566523 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
CCP110-208ENST00000566523 HOXB1P14653 301 aaPredicted RBP16.93■□□□□ 0.3
CCP110-208ENST00000566523 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
CCP110-208ENST00000566523 PCDH10Q9P2E7 1040 aa16.92■□□□□ 0.3
CCP110-208ENST00000566523 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
CCP110-208ENST00000566523 EMP3P54852 163 aa16.9■□□□□ 0.3
CCP110-208ENST00000566523 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
CCP110-208ENST00000566523 GPR153Q6NV75 609 aa16.88■□□□□ 0.29
CCP110-208ENST00000566523 FOXK1P85037 733 aa16.85■□□□□ 0.29
CCP110-208ENST00000566523 CDAN1Q8IWY9 1227 aa16.84■□□□□ 0.29
CCP110-208ENST00000566523 SLC34A2O95436 690 aa16.83■□□□□ 0.28
CCP110-208ENST00000566523 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
CCP110-208ENST00000566523 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
CCP110-208ENST00000566523 DSG2Q14126 1118 aa16.81■□□□□ 0.28
CCP110-208ENST00000566523 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
CCP110-208ENST00000566523 FAM205CA6NFA0 338 aa16.8■□□□□ 0.28
CCP110-208ENST00000566523 ARSIQ5FYB1 569 aa16.8■□□□□ 0.28
CCP110-208ENST00000566523 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
CCP110-208ENST00000566523 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
CCP110-208ENST00000566523 HS3ST6Q96QI5 342 aa16.78■□□□□ 0.28
CCP110-208ENST00000566523 KHSRPQ92945 711 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCP110-208ENST00000566523 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
CCP110-208ENST00000566523 PDE4AP27815 886 aa16.74■□□□□ 0.27
CCP110-208ENST00000566523 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
CCP110-208ENST00000566523 PCDHGA4Q9Y5G9 962 aa16.73■□□□□ 0.27
CCP110-208ENST00000566523 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
CCP110-208ENST00000566523 ERBB3P21860 1342 aa16.71■□□□□ 0.27
CCP110-208ENST00000566523 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
CCP110-208ENST00000566523 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
CCP110-208ENST00000566523 LARP6Q9BRS8 491 aaKnown RBP16.66■□□□□ 0.26
CCP110-208ENST00000566523 NUDT7P0C024 238 aa16.65■□□□□ 0.26
CCP110-208ENST00000566523 MFSD10Q14728 455 aa16.65■□□□□ 0.26
CCP110-208ENST00000566523 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
CCP110-208ENST00000566523 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
CCP110-208ENST00000566523 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
CCP110-208ENST00000566523 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
CCP110-208ENST00000566523 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
CCP110-208ENST00000566523 CFAP44Q96MT7 982 aa16.61■□□□□ 0.25
CCP110-208ENST00000566523 KRTAP3-3Q9BYR6 98 aa16.6■□□□□ 0.25
CCP110-208ENST00000566523 KRTAP3-2Q9BYR7 98 aa16.6■□□□□ 0.25
CCP110-208ENST00000566523 PLSCR2Q9NRY7 297 aa16.59■□□□□ 0.25
CCP110-208ENST00000566523 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
CCP110-208ENST00000566523 LHX6Q9UPM6 363 aa16.56■□□□□ 0.24
CCP110-208ENST00000566523 TBC1D12O60347 775 aa16.55■□□□□ 0.24
CCP110-208ENST00000566523 ZNF687Q8N1G0 1237 aa16.55■□□□□ 0.24
CCP110-208ENST00000566523 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCP110-208ENST00000566523 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
CCP110-208ENST00000566523 SPNS2Q8IVW8 549 aa16.44■□□□□ 0.22
CCP110-208ENST00000566523 CAMK2BQ13554 666 aa16.43■□□□□ 0.22
CCP110-208ENST00000566523 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
CCP110-208ENST00000566523 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
CCP110-208ENST00000566523 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
CCP110-208ENST00000566523 EVI5O60447 810 aa16.36■□□□□ 0.21
CCP110-208ENST00000566523 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
CCP110-208ENST00000566523 PBX2P40425 430 aa16.33■□□□□ 0.2
CCP110-208ENST00000566523 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
CCP110-208ENST00000566523 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CCP110-208ENST00000566523 MMRN1Q13201 1228 aa16.3■□□□□ 0.2
CCP110-208ENST00000566523 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
CCP110-208ENST00000566523 FOSBP53539 338 aa16.27■□□□□ 0.2
CCP110-208ENST00000566523 LSM11P83369 360 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCP110-208ENST00000566523 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
CCP110-208ENST00000566523 DPYSL4O14531 572 aa16.25■□□□□ 0.19
CCP110-208ENST00000566523 ARHGAP33O14559 1287 aa16.25■□□□□ 0.19
CCP110-208ENST00000566523 WDR70Q9NW82 654 aa16.24■□□□□ 0.19
CCP110-208ENST00000566523 E2F4Q16254 413 aa16.23■□□□□ 0.19
CCP110-208ENST00000566523 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
CCP110-208ENST00000566523 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
CCP110-208ENST00000566523 PSEN2P49810 448 aa16.19■□□□□ 0.18
CCP110-208ENST00000566523 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
CCP110-208ENST00000566523 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
CCP110-208ENST00000566523 DMRTA1Q5VZB9 504 aa16.16■□□□□ 0.18
CCP110-208ENST00000566523 ARIH1Q9Y4X5 557 aaPredicted RBP16.16■□□□□ 0.18
CCP110-208ENST00000566523 PCDHGA10Q9Y5H3 936 aa16.15■□□□□ 0.18
CCP110-208ENST00000566523 ZDHHC16Q969W1 377 aa16.14■□□□□ 0.17
CCP110-208ENST00000566523 PDIA6Q15084 440 aa16.13■□□□□ 0.17
CCP110-208ENST00000566523 KCNK17Q96T54 332 aa16.13■□□□□ 0.17
CCP110-208ENST00000566523 PTGER2P43116 358 aa16.12■□□□□ 0.17
CCP110-208ENST00000566523 ADAM33Q9BZ11 813 aa16.12■□□□□ 0.17
CCP110-208ENST00000566523 PHF14O94880 888 aa16.11■□□□□ 0.17
CCP110-208ENST00000566523 ADGRD1Q6QNK2 874 aa16.1■□□□□ 0.17
CCP110-208ENST00000566523 SPDYE16A6NNV3 312 aaPredicted RBP16.09■□□□□ 0.17
CCP110-208ENST00000566523 TK2O00142 265 aa16.09■□□□□ 0.17
CCP110-208ENST00000566523 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
CCP110-208ENST00000566523 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
CCP110-208ENST00000566523 PTPREP23469 700 aa16.07■□□□□ 0.16
CCP110-208ENST00000566523 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
CCP110-208ENST00000566523 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
CCP110-208ENST00000566523 RNF166Q96A37 237 aaPredicted RBP16.04■□□□□ 0.16
CCP110-208ENST00000566523 EPAS1Q99814 870 aa16.04■□□□□ 0.16
CCP110-208ENST00000566523 HRO43593 1189 aa16.03■□□□□ 0.16
CCP110-208ENST00000566523 DDX12PQ92771 950 aa16.03■□□□□ 0.16
CCP110-208ENST00000566523 SLC4A5Q9BY07 1137 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms