RNA–Protein interactions for RNA: ENST00000566519.1

EIF3C-210, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 620 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-210ENST00000566519 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
EIF3C-210ENST00000566519 CLIP1P30622 1438 aa23.47■■□□□ 1.35
EIF3C-210ENST00000566519 POGZQ7Z3K3 1410 aa23.45■■□□□ 1.34
EIF3C-210ENST00000566519 PTPRMP28827 1452 aa23.44■■□□□ 1.34
EIF3C-210ENST00000566519 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
EIF3C-210ENST00000566519 CDC42BPAQ5VT25 1732 aa23.43■■□□□ 1.34
EIF3C-210ENST00000566519 CDK11AQ9UQ88 783 aaPredicted RBP23.41■■□□□ 1.34
EIF3C-210ENST00000566519 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
EIF3C-210ENST00000566519 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
EIF3C-210ENST00000566519 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
EIF3C-210ENST00000566519 PREX2Q70Z35 1606 aa23.41■■□□□ 1.34
EIF3C-210ENST00000566519 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.34
EIF3C-210ENST00000566519 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.34
EIF3C-210ENST00000566519 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
EIF3C-210ENST00000566519 ARID4BQ4LE39 1312 aaPredicted RBP23.37■■□□□ 1.33
EIF3C-210ENST00000566519 AFAP1Q8N556 730 aa23.37■■□□□ 1.33
EIF3C-210ENST00000566519 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
EIF3C-210ENST00000566519 KDM5CP41229 1560 aa23.35■■□□□ 1.33
EIF3C-210ENST00000566519 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.33
EIF3C-210ENST00000566519 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
EIF3C-210ENST00000566519 ABCC1P33527 1531 aa23.32■■□□□ 1.32
EIF3C-210ENST00000566519 ATP10AO60312 1499 aa23.3■■□□□ 1.32
EIF3C-210ENST00000566519 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
EIF3C-210ENST00000566519 ABCA6Q8N139 1617 aa23.29■■□□□ 1.32
EIF3C-210ENST00000566519 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
EIF3C-210ENST00000566519 CEP162Q5TB80 1403 aa23.28■■□□□ 1.32
EIF3C-210ENST00000566519 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
EIF3C-210ENST00000566519 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
EIF3C-210ENST00000566519 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
EIF3C-210ENST00000566519 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
EIF3C-210ENST00000566519 MLECQ14165 292 aa23.27■■□□□ 1.32
EIF3C-210ENST00000566519 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
EIF3C-210ENST00000566519 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
EIF3C-210ENST00000566519 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
EIF3C-210ENST00000566519 MLH3Q9UHC1 1453 aa23.22■■□□□ 1.31
EIF3C-210ENST00000566519 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
EIF3C-210ENST00000566519 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
EIF3C-210ENST00000566519 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
EIF3C-210ENST00000566519 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
EIF3C-210ENST00000566519 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
EIF3C-210ENST00000566519 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
EIF3C-210ENST00000566519 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
EIF3C-210ENST00000566519 ZNF644Q9H582 1327 aaPredicted RBP23.13■■□□□ 1.29
EIF3C-210ENST00000566519 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
EIF3C-210ENST00000566519 HSPA2P54652 639 aa23.12■■□□□ 1.29
EIF3C-210ENST00000566519 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
EIF3C-210ENST00000566519 AGLP35573 1532 aa23.09■■□□□ 1.29
EIF3C-210ENST00000566519 EHBP1L1Q8N3D4 1523 aa23.09■■□□□ 1.29
EIF3C-210ENST00000566519 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
EIF3C-210ENST00000566519 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
EIF3C-210ENST00000566519 INO80Q9ULG1 1556 aaPredicted RBP23.08■■□□□ 1.29
EIF3C-210ENST00000566519 C3P01024 1663 aa23.08■■□□□ 1.29
EIF3C-210ENST00000566519 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
EIF3C-210ENST00000566519 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
EIF3C-210ENST00000566519 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
EIF3C-210ENST00000566519 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
EIF3C-210ENST00000566519 ATP7AQ04656 1500 aa23.04■■□□□ 1.28
EIF3C-210ENST00000566519 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
EIF3C-210ENST00000566519 NCOA2Q15596 1464 aa23.02■■□□□ 1.28
EIF3C-210ENST00000566519 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
EIF3C-210ENST00000566519 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
EIF3C-210ENST00000566519 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
EIF3C-210ENST00000566519 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
EIF3C-210ENST00000566519 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
EIF3C-210ENST00000566519 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
EIF3C-210ENST00000566519 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
EIF3C-210ENST00000566519 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
EIF3C-210ENST00000566519 A2MP01023 1474 aa22.94■■□□□ 1.26
EIF3C-210ENST00000566519 LRRC9Q6ZRR7 1453 aa22.94■■□□□ 1.26
EIF3C-210ENST00000566519 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
EIF3C-210ENST00000566519 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
EIF3C-210ENST00000566519 MROH2AA6NES4 1674 aa22.9■■□□□ 1.26
EIF3C-210ENST00000566519 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
EIF3C-210ENST00000566519 ZMYM3Q14202 1370 aa22.85■■□□□ 1.25
EIF3C-210ENST00000566519 RTEL1-TNFRSF6BF6WH68 1400 aa22.84■■□□□ 1.25
EIF3C-210ENST00000566519 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
EIF3C-210ENST00000566519 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
EIF3C-210ENST00000566519 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
EIF3C-210ENST00000566519 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
EIF3C-210ENST00000566519 GGT6Q6P531 493 aa22.81■■□□□ 1.24
EIF3C-210ENST00000566519 DHX29Q7Z478 1369 aaKnown RBP22.8■■□□□ 1.24
EIF3C-210ENST00000566519 PTPRKQ15262 1439 aa22.78■■□□□ 1.24
EIF3C-210ENST00000566519 ESF1Q9H501 851 aaKnown RBP22.76■■□□□ 1.23
EIF3C-210ENST00000566519 FBXO41Q8TF61 875 aa22.75■■□□□ 1.23
EIF3C-210ENST00000566519 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
EIF3C-210ENST00000566519 NPATQ14207 1427 aa22.74■■□□□ 1.23
EIF3C-210ENST00000566519 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
EIF3C-210ENST00000566519 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
EIF3C-210ENST00000566519 ZNF142P52746 1687 aaPredicted RBP22.71■■□□□ 1.23
EIF3C-210ENST00000566519 KIF3BO15066 747 aa22.71■■□□□ 1.23
EIF3C-210ENST00000566519 CAMSAP1Q5T5Y3 1602 aa22.71■■□□□ 1.23
EIF3C-210ENST00000566519 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
EIF3C-210ENST00000566519 RSPH4AQ5TD94 716 aa22.69■■□□□ 1.22
EIF3C-210ENST00000566519 MIA2Q96PC5 1412 aa22.68■■□□□ 1.22
EIF3C-210ENST00000566519 FBXO31Q5XUX0 539 aaPredicted RBP22.68■■□□□ 1.22
EIF3C-210ENST00000566519 CERKQ8TCT0 537 aa22.67■■□□□ 1.22
EIF3C-210ENST00000566519 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
EIF3C-210ENST00000566519 CROCC2H7BZ55 1655 aa22.66■■□□□ 1.22
EIF3C-210ENST00000566519 CEP170BQ9Y4F5 1589 aaPredicted RBP22.66■■□□□ 1.22
EIF3C-210ENST00000566519 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms