RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 ZMYM4Q5VZL5 1548 aa34.54■■■■□ 3.12
SPG7-214ENST00000566371 CDC42BPBQ9Y5S2 1711 aa34.52■■■■□ 3.12
SPG7-214ENST00000566371 SCAPERQ9BY12 1400 aa34.52■■■■□ 3.12
SPG7-214ENST00000566371 POGZQ7Z3K3 1410 aa34.51■■■■□ 3.12
SPG7-214ENST00000566371 ARHGEF40Q8TER5 1519 aa34.49■■■■□ 3.11
SPG7-214ENST00000566371 CDC42BPAQ5VT25 1732 aa34.47■■■■□ 3.11
SPG7-214ENST00000566371 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
SPG7-214ENST00000566371 MTUS2Q5JR59 1369 aa34.46■■■■□ 3.11
SPG7-214ENST00000566371 MAGI2Q86UL8 1455 aa34.46■■■■□ 3.11
SPG7-214ENST00000566371 EHBP1L1Q8N3D4 1523 aa34.43■■■■□ 3.1
SPG7-214ENST00000566371 ZFYVE16Q7Z3T8 1539 aa34.4■■■■□ 3.1
SPG7-214ENST00000566371 ZNF518AQ6AHZ1 1483 aa34.39■■■■□ 3.1
SPG7-214ENST00000566371 GPATCH8Q9UKJ3 1502 aaKnown RBP34.39■■■■□ 3.1
SPG7-214ENST00000566371 ABCC1P33527 1531 aa34.37■■■■□ 3.09
SPG7-214ENST00000566371 KDM5CP41229 1560 aa34.35■■■■□ 3.09
SPG7-214ENST00000566371 TIAM1Q13009 1591 aa34.35■■■■□ 3.09
SPG7-214ENST00000566371 YEATS2Q9ULM3 1422 aa34.32■■■■□ 3.08
SPG7-214ENST00000566371 CCNB3Q8WWL7 1395 aa34.32■■■■□ 3.08
SPG7-214ENST00000566371 ITSN2Q9NZM3 1697 aa34.31■■■■□ 3.08
SPG7-214ENST00000566371 ARHGEF12Q9NZN5 1544 aa34.28■■■■□ 3.08
SPG7-214ENST00000566371 SAMD9LQ8IVG5 1584 aa34.28■■■■□ 3.08
SPG7-214ENST00000566371 MAP3K1Q13233 1512 aa34.26■■■■□ 3.08
SPG7-214ENST00000566371 AFAP1Q8N556 730 aa34.26■■■■□ 3.08
SPG7-214ENST00000566371 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
SPG7-214ENST00000566371 BCORL1Q5H9F3 1711 aa34.25■■■■□ 3.07
SPG7-214ENST00000566371 HECW2Q9P2P5 1572 aa34.25■■■■□ 3.07
SPG7-214ENST00000566371 SUPT6HQ7KZ85 1726 aaKnown RBP34.24■■■■□ 3.07
SPG7-214ENST00000566371 CFDP1Q9UEE9 299 aaPredicted RBP34.24■■■■□ 3.07
SPG7-214ENST00000566371 TRAPPC8Q9Y2L5 1435 aa34.23■■■■□ 3.07
SPG7-214ENST00000566371 ARID4BQ4LE39 1312 aaPredicted RBP34.23■■■■□ 3.07
SPG7-214ENST00000566371 ATP10AO60312 1499 aa34.22■■■■□ 3.07
SPG7-214ENST00000566371 PLEKHH2Q8IVE3 1493 aa34.22■■■■□ 3.07
SPG7-214ENST00000566371 MLH3Q9UHC1 1453 aa34.21■■■■□ 3.07
SPG7-214ENST00000566371 ZNF777Q9ULD5 760 aaPredicted RBP34.2■■■■□ 3.07
SPG7-214ENST00000566371 KIAA1107Q9UPP5 1409 aa34.2■■■■□ 3.06
SPG7-214ENST00000566371 NCOA2Q15596 1464 aa34.2■■■■□ 3.06
SPG7-214ENST00000566371 LRRC9Q6ZRR7 1453 aa34.2■■■■□ 3.06
SPG7-214ENST00000566371 C9orf84Q5VXU9 1444 aa34.19■■■■□ 3.06
SPG7-214ENST00000566371 SYCP2Q9BX26 1530 aa34.19■■■■□ 3.06
SPG7-214ENST00000566371 SIGLEC1Q9BZZ2 1709 aa34.18■■■■□ 3.06
SPG7-214ENST00000566371 DIP2CQ9Y2E4 1556 aa34.14■■■■□ 3.06
SPG7-214ENST00000566371 MADDQ8WXG6 1647 aa34.12■■■■□ 3.05
SPG7-214ENST00000566371 REREQ9P2R6 1566 aa34.11■■■■□ 3.05
SPG7-214ENST00000566371 ABCA6Q8N139 1617 aa34.11■■■■□ 3.05
SPG7-214ENST00000566371 KIDINS220Q9ULH0 1771 aa34.09■■■■□ 3.05
SPG7-214ENST00000566371 MYT1LQ9UL68 1186 aa34.09■■■■□ 3.05
SPG7-214ENST00000566371 HNRNPMP52272 730 aaKnown RBP eCLIP34.08■■■■□ 3.052e-7■■■■□ 23.6
SPG7-214ENST00000566371 PTPRMP28827 1452 aa34.07■■■■□ 3.05
SPG7-214ENST00000566371 KANK4Q5T7N3 995 aaPredicted RBP34.03■■■■□ 3.04
SPG7-214ENST00000566371 SPAG9O60271 1321 aaKnown RBP34.02■■■■□ 3.04
SPG7-214ENST00000566371 ZNF644Q9H582 1327 aaPredicted RBP34.02■■■■□ 3.04
SPG7-214ENST00000566371 MBD5Q9P267 1494 aa34.01■■■■□ 3.04
SPG7-214ENST00000566371 INO80Q9ULG1 1556 aaPredicted RBP34.01■■■■□ 3.03
SPG7-214ENST00000566371 APLP2Q06481 763 aa34■■■■□ 3.03
SPG7-214ENST00000566371 RIMS1Q86UR5 1692 aaKnown RBP33.99■■■■□ 3.03
SPG7-214ENST00000566371 ATP7AQ04656 1500 aa33.99■■■■□ 3.03
SPG7-214ENST00000566371 CAMSAP2Q08AD1 1489 aa33.98■■■■□ 3.03
SPG7-214ENST00000566371 AGLP35573 1532 aa33.98■■■■□ 3.03
SPG7-214ENST00000566371 FER1L4A9Z1Z3 1794 aa33.96■■■■□ 3.03
SPG7-214ENST00000566371 MLECQ14165 292 aa33.94■■■■□ 3.02
SPG7-214ENST00000566371 MYOM3Q5VTT5 1437 aa33.9■■■■□ 3.02
SPG7-214ENST00000566371 CCDC141Q6ZP82 1450 aa33.89■■■■□ 3.02
SPG7-214ENST00000566371 MIA2Q96PC5 1412 aa33.88■■■■□ 3.01
SPG7-214ENST00000566371 RSPH4AQ5TD94 716 aa33.88■■■■□ 3.01
SPG7-214ENST00000566371 ARHGEF5Q12774 1597 aa33.88■■■■□ 3.01
SPG7-214ENST00000566371 RTEL1-TNFRSF6BF6WH68 1400 aa33.87■■■■□ 3.01
SPG7-214ENST00000566371 PLXNC1O60486 1568 aa33.85■■■■□ 3.01
SPG7-214ENST00000566371 ADGBQ8N7X0 1667 aa33.84■■■■□ 3.01
SPG7-214ENST00000566371 A2MP01023 1474 aa33.82■■■■□ 3.01
SPG7-214ENST00000566371 MAST1Q9Y2H9 1570 aa33.7■■■□□ 2.99
SPG7-214ENST00000566371 TSPY4P0CV99 314 aa33.7■■■□□ 2.99
SPG7-214ENST00000566371 TSPY10P0CW01 314 aa33.7■■■□□ 2.99
SPG7-214ENST00000566371 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
SPG7-214ENST00000566371 PTPN23Q9H3S7 1636 aa33.68■■■□□ 2.98
SPG7-214ENST00000566371 ESF1Q9H501 851 aaKnown RBP33.68■■■□□ 2.98
SPG7-214ENST00000566371 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
SPG7-214ENST00000566371 LMTK3Q96Q04 1460 aa33.68■■■□□ 2.98
SPG7-214ENST00000566371 FGD6Q6ZV73 1430 aa33.67■■■□□ 2.98
SPG7-214ENST00000566371 PLPPR3Q6T4P5 718 aa33.66■■■□□ 2.98
SPG7-214ENST00000566371 C3P01024 1663 aa33.64■■■□□ 2.98
SPG7-214ENST00000566371 MROH2AA6NES4 1674 aa33.63■■■□□ 2.97
SPG7-214ENST00000566371 TCOF1Q13428 1488 aaKnown RBP33.63■■■□□ 2.97
SPG7-214ENST00000566371 CEBPAP49715 358 aaPredicted RBP33.6■■■□□ 2.97
SPG7-214ENST00000566371 PPP6R1Q9UPN7 881 aa33.59■■■□□ 2.97
SPG7-214ENST00000566371 CROCC2H7BZ55 1655 aa33.58■■■□□ 2.97
SPG7-214ENST00000566371 PREX1Q8TCU6 1659 aa33.58■■■□□ 2.97
SPG7-214ENST00000566371 SHANK2Q9UPX8 1470 aa33.57■■■□□ 2.97
SPG7-214ENST00000566371 DNMT1P26358 1616 aaKnown RBP33.54■■■□□ 2.96
SPG7-214ENST00000566371 GGT6Q6P531 493 aa33.54■■■□□ 2.96
SPG7-214ENST00000566371 CLTCQ00610 1675 aaKnown RBP33.54■■■□□ 2.96
SPG7-214ENST00000566371 ABCC5O15440 1437 aa33.53■■■□□ 2.96
SPG7-214ENST00000566371 SETD1BQ9UPS6 1966 aaKnown RBP33.51■■■□□ 2.96
SPG7-214ENST00000566371 FAM135AQ9P2D6 1515 aa33.51■■■□□ 2.95
SPG7-214ENST00000566371 DAPK1P53355 1430 aa33.51■■■□□ 2.95
SPG7-214ENST00000566371 ZMYM3Q14202 1370 aa33.5■■■□□ 2.95
SPG7-214ENST00000566371 KIF3BO15066 747 aa33.49■■■□□ 2.95
SPG7-214ENST00000566371 NPATQ14207 1427 aa33.47■■■□□ 2.95
SPG7-214ENST00000566371 EIF2AK4Q9P2K8 1649 aaKnown RBP33.47■■■□□ 2.95
SPG7-214ENST00000566371 UHRF1BP1Q6BDS2 1440 aa33.45■■■□□ 2.95
SPG7-214ENST00000566371 DUOX2Q9NRD8 1548 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms