RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 PREX2Q70Z35 1606 aa32.18■■■□□ 2.74
TRADD-204ENST00000566104 SCAPERQ9BY12 1400 aa32.18■■■□□ 2.74
TRADD-204ENST00000566104 MAGI2Q86UL8 1455 aa32.18■■■□□ 2.74
TRADD-204ENST00000566104 CDC42BPBQ9Y5S2 1711 aa32.17■■■□□ 2.74
TRADD-204ENST00000566104 ZFYVE16Q7Z3T8 1539 aa32.17■■■□□ 2.74
TRADD-204ENST00000566104 BCORL1Q5H9F3 1711 aa32.17■■■□□ 2.74
TRADD-204ENST00000566104 ADAMTSL3P82987 1691 aa32.16■■■□□ 2.74
TRADD-204ENST00000566104 CEP162Q5TB80 1403 aa32.11■■■□□ 2.73
TRADD-204ENST00000566104 CDC42BPAQ5VT25 1732 aa32.1■■■□□ 2.73
TRADD-204ENST00000566104 ZNF518AQ6AHZ1 1483 aa32.09■■■□□ 2.73
TRADD-204ENST00000566104 ARID4BQ4LE39 1312 aaPredicted RBP32.08■■■□□ 2.73
TRADD-204ENST00000566104 YEATS2Q9ULM3 1422 aa32.05■■■□□ 2.72
TRADD-204ENST00000566104 KDM5CP41229 1560 aa32.04■■■□□ 2.72
TRADD-204ENST00000566104 MADDQ8WXG6 1647 aa32.04■■■□□ 2.72
TRADD-204ENST00000566104 ABCC1P33527 1531 aa32.02■■■□□ 2.72
TRADD-204ENST00000566104 HECW2Q9P2P5 1572 aa32.01■■■□□ 2.71
TRADD-204ENST00000566104 ITSN2Q9NZM3 1697 aa32.01■■■□□ 2.71
TRADD-204ENST00000566104 PTPRMP28827 1452 aa31.99■■■□□ 2.71
TRADD-204ENST00000566104 SIGLEC1Q9BZZ2 1709 aa31.98■■■□□ 2.71
TRADD-204ENST00000566104 RIMS1Q86UR5 1692 aaKnown RBP31.95■■■□□ 2.71
TRADD-204ENST00000566104 MTUS2Q5JR59 1369 aa31.95■■■□□ 2.71
TRADD-204ENST00000566104 C9orf84Q5VXU9 1444 aa31.95■■■□□ 2.71
TRADD-204ENST00000566104 ATP10AO60312 1499 aa31.95■■■□□ 2.7
TRADD-204ENST00000566104 EHBP1L1Q8N3D4 1523 aa31.94■■■□□ 2.7
TRADD-204ENST00000566104 FER1L4A9Z1Z3 1794 aa31.9■■■□□ 2.7
TRADD-204ENST00000566104 GPATCH8Q9UKJ3 1502 aaKnown RBP31.9■■■□□ 2.7
TRADD-204ENST00000566104 SAMD9LQ8IVG5 1584 aa31.89■■■□□ 2.7
TRADD-204ENST00000566104 AFAP1Q8N556 730 aa31.88■■■□□ 2.69
TRADD-204ENST00000566104 MLH3Q9UHC1 1453 aa31.88■■■□□ 2.69
TRADD-204ENST00000566104 DIP2CQ9Y2E4 1556 aa31.88■■■□□ 2.69
TRADD-204ENST00000566104 ARHGEF12Q9NZN5 1544 aa31.87■■■□□ 2.69
TRADD-204ENST00000566104 REREQ9P2R6 1566 aa31.86■■■□□ 2.69
TRADD-204ENST00000566104 ABCA6Q8N139 1617 aa31.86■■■□□ 2.69
TRADD-204ENST00000566104 CCNB3Q8WWL7 1395 aa31.85■■■□□ 2.69
TRADD-204ENST00000566104 MYT1LQ9UL68 1186 aa31.85■■■□□ 2.69
TRADD-204ENST00000566104 TRAPPC8Q9Y2L5 1435 aa31.84■■■□□ 2.69
TRADD-204ENST00000566104 SYCP2Q9BX26 1530 aa31.83■■■□□ 2.69
TRADD-204ENST00000566104 PLEKHH2Q8IVE3 1493 aa31.83■■■□□ 2.69
TRADD-204ENST00000566104 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
TRADD-204ENST00000566104 KIDINS220Q9ULH0 1771 aa31.8■■■□□ 2.68
TRADD-204ENST00000566104 LOC105371045A0A1W2PR82 267 aa31.79■■■□□ 2.68
TRADD-204ENST00000566104 SUPT6HQ7KZ85 1726 aaKnown RBP31.79■■■□□ 2.68
TRADD-204ENST00000566104 ZNF777Q9ULD5 760 aaPredicted RBP31.79■■■□□ 2.68
TRADD-204ENST00000566104 VPS8Q8N3P4 1428 aa31.78■■■□□ 2.68
TRADD-204ENST00000566104 CFDP1Q9UEE9 299 aaPredicted RBP31.78■■■□□ 2.68
TRADD-204ENST00000566104 KIAA1107Q9UPP5 1409 aa31.76■■■□□ 2.68
TRADD-204ENST00000566104 MLECQ14165 292 aa31.76■■■□□ 2.67
TRADD-204ENST00000566104 AGLP35573 1532 aa31.71■■■□□ 2.67
TRADD-204ENST00000566104 INO80Q9ULG1 1556 aaPredicted RBP31.68■■■□□ 2.66
TRADD-204ENST00000566104 ATP7AQ04656 1500 aa31.68■■■□□ 2.66
TRADD-204ENST00000566104 NCOA2Q15596 1464 aa31.66■■■□□ 2.66
TRADD-204ENST00000566104 HNRNPMP52272 730 aaKnown RBP eCLIP31.65■■■□□ 2.66
TRADD-204ENST00000566104 SPAG9O60271 1321 aaKnown RBP31.65■■■□□ 2.66
TRADD-204ENST00000566104 LMTK3Q96Q04 1460 aa31.65■■■□□ 2.66
TRADD-204ENST00000566104 MAP3K1Q13233 1512 aa31.62■■■□□ 2.65
TRADD-204ENST00000566104 LRRC9Q6ZRR7 1453 aa31.59■■■□□ 2.65
TRADD-204ENST00000566104 ADGBQ8N7X0 1667 aa31.58■■■□□ 2.65
TRADD-204ENST00000566104 PLPPR3Q6T4P5 718 aa31.58■■■□□ 2.65
TRADD-204ENST00000566104 PREX1Q8TCU6 1659 aa31.57■■■□□ 2.65
TRADD-204ENST00000566104 PLXNC1O60486 1568 aa31.56■■■□□ 2.64
TRADD-204ENST00000566104 CAMSAP2Q08AD1 1489 aa31.54■■■□□ 2.64
TRADD-204ENST00000566104 MBD5Q9P267 1494 aa31.54■■■□□ 2.64
TRADD-204ENST00000566104 C3P01024 1663 aa31.53■■■□□ 2.64
TRADD-204ENST00000566104 ZNF644Q9H582 1327 aaPredicted RBP31.52■■■□□ 2.64
TRADD-204ENST00000566104 ESF1Q9H501 851 aaKnown RBP31.52■■■□□ 2.64
TRADD-204ENST00000566104 A2MP01023 1474 aa31.51■■■□□ 2.63
TRADD-204ENST00000566104 CNTLNQ9NXG0 1405 aa31.5■■■□□ 2.63
TRADD-204ENST00000566104 SETD1BQ9UPS6 1966 aaKnown RBP31.5■■■□□ 2.63
TRADD-204ENST00000566104 MROH2AA6NES4 1674 aa31.49■■■□□ 2.63
TRADD-204ENST00000566104 CCDC141Q6ZP82 1450 aa31.49■■■□□ 2.63
TRADD-204ENST00000566104 RTEL1-TNFRSF6BF6WH68 1400 aa31.49■■■□□ 2.63
TRADD-204ENST00000566104 ARHGEF5Q12774 1597 aa31.46■■■□□ 2.63
TRADD-204ENST00000566104 RSPH4AQ5TD94 716 aa31.43■■■□□ 2.62
TRADD-204ENST00000566104 CEBPAP49715 358 aaPredicted RBP31.42■■■□□ 2.62
TRADD-204ENST00000566104 APLP2Q06481 763 aa31.39■■■□□ 2.62
TRADD-204ENST00000566104 UHRF1BP1Q6BDS2 1440 aa31.39■■■□□ 2.62
TRADD-204ENST00000566104 CLTCQ00610 1675 aaKnown RBP31.38■■■□□ 2.61
TRADD-204ENST00000566104 KANK4Q5T7N3 995 aaPredicted RBP31.37■■■□□ 2.61
TRADD-204ENST00000566104 MYOM3Q5VTT5 1437 aa31.37■■■□□ 2.61
TRADD-204ENST00000566104 MIA2Q96PC5 1412 aa31.36■■■□□ 2.61
TRADD-204ENST00000566104 HSPA2P54652 639 aa31.36■■■□□ 2.61
TRADD-204ENST00000566104 DHX29Q7Z478 1369 aaKnown RBP31.3■■■□□ 2.6
TRADD-204ENST00000566104 MAST1Q9Y2H9 1570 aa31.3■■■□□ 2.6
TRADD-204ENST00000566104 NPATQ14207 1427 aa31.29■■■□□ 2.6
TRADD-204ENST00000566104 TSPY4P0CV99 314 aa31.28■■■□□ 2.6
TRADD-204ENST00000566104 TSPY10P0CW01 314 aa31.28■■■□□ 2.6
TRADD-204ENST00000566104 PPP6R1Q9UPN7 881 aa31.28■■■□□ 2.6
TRADD-204ENST00000566104 GGT6Q6P531 493 aa31.27■■■□□ 2.6
TRADD-204ENST00000566104 ZMYM3Q14202 1370 aa31.27■■■□□ 2.6
TRADD-204ENST00000566104 FAM135AQ9P2D6 1515 aa31.26■■■□□ 2.59
TRADD-204ENST00000566104 PTPN23Q9H3S7 1636 aa31.21■■■□□ 2.59
TRADD-204ENST00000566104 STRCQ7RTU9 1775 aa31.2■■■□□ 2.59
TRADD-204ENST00000566104 CROCC2H7BZ55 1655 aa31.2■■■□□ 2.59
TRADD-204ENST00000566104 KDM5DQ9BY66 1539 aa31.19■■■□□ 2.58
TRADD-204ENST00000566104 ILDR1Q86SU0 546 aaPredicted RBP31.18■■■□□ 2.58
TRADD-204ENST00000566104 MYO3AQ8NEV4 1616 aa31.17■■■□□ 2.58
TRADD-204ENST00000566104 EIF2AK4Q9P2K8 1649 aaKnown RBP31.17■■■□□ 2.58
TRADD-204ENST00000566104 ZNF142P52746 1687 aaPredicted RBP31.17■■■□□ 2.58
TRADD-204ENST00000566104 KIF3BO15066 747 aa31.17■■■□□ 2.58
TRADD-204ENST00000566104 PTPRKQ15262 1439 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms