RNA–Protein interactions for RNA: ENST00000566047.5

CMC2-215, Transcript of C-X9-C motif containing 2, humanhuman

TSL 2

Gene CMC2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-215ENST00000566047 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
CMC2-215ENST00000566047 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
CMC2-215ENST00000566047 KIF3CO14782 793 aa9.73□□□□□ -0.85
CMC2-215ENST00000566047 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
CMC2-215ENST00000566047 C2orf72A6NCS6 295 aa9.71□□□□□ -0.86
CMC2-215ENST00000566047 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
CMC2-215ENST00000566047 RYDENQ9NUL5 291 aaKnown RBP9.7□□□□□ -0.86
CMC2-215ENST00000566047 EMP3P54852 163 aa9.69□□□□□ -0.86
CMC2-215ENST00000566047 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
CMC2-215ENST00000566047 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
CMC2-215ENST00000566047 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
CMC2-215ENST00000566047 TMC2Q8TDI7 906 aa9.67□□□□□ -0.86
CMC2-215ENST00000566047 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
CMC2-215ENST00000566047 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
CMC2-215ENST00000566047 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
CMC2-215ENST00000566047 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
CMC2-215ENST00000566047 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
CMC2-215ENST00000566047 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
CMC2-215ENST00000566047 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
CMC2-215ENST00000566047 GPHNQ9NQX3 736 aaPredicted RBP9.6□□□□□ -0.87
CMC2-215ENST00000566047 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
CMC2-215ENST00000566047 SLC34A2O95436 690 aa9.58□□□□□ -0.88
CMC2-215ENST00000566047 FOXK1P85037 733 aa9.58□□□□□ -0.88
CMC2-215ENST00000566047 DSG2Q14126 1118 aa9.57□□□□□ -0.88
CMC2-215ENST00000566047 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.884e-7■■■□□ 18.5
CMC2-215ENST00000566047 CRISPLD2Q9H0B8 497 aa9.57□□□□□ -0.88
CMC2-215ENST00000566047 BBXQ8WY36 941 aaPredicted RBP9.56□□□□□ -0.88
CMC2-215ENST00000566047 ERBB3P21860 1342 aa9.56□□□□□ -0.88
CMC2-215ENST00000566047 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
CMC2-215ENST00000566047 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
CMC2-215ENST00000566047 NCKAP5LQ9HCH0 1330 aa9.54□□□□□ -0.88
CMC2-215ENST00000566047 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
CMC2-215ENST00000566047 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
CMC2-215ENST00000566047 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
CMC2-215ENST00000566047 NUDT7P0C024 238 aa9.51□□□□□ -0.89
CMC2-215ENST00000566047 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
CMC2-215ENST00000566047 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
CMC2-215ENST00000566047 PDE4AP27815 886 aa9.49□□□□□ -0.89
CMC2-215ENST00000566047 PPP1R15BQ5SWA1 713 aa9.49□□□□□ -0.89
CMC2-215ENST00000566047 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
CMC2-215ENST00000566047 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
CMC2-215ENST00000566047 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.9
CMC2-215ENST00000566047 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.9
CMC2-215ENST00000566047 MFSD10Q14728 455 aa9.45□□□□□ -0.9
CMC2-215ENST00000566047 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
CMC2-215ENST00000566047 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
CMC2-215ENST00000566047 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
CMC2-215ENST00000566047 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
CMC2-215ENST00000566047 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
CMC2-215ENST00000566047 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
CMC2-215ENST00000566047 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
CMC2-215ENST00000566047 TBC1D12O60347 775 aa9.4□□□□□ -0.9
CMC2-215ENST00000566047 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
CMC2-215ENST00000566047 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
CMC2-215ENST00000566047 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
CMC2-215ENST00000566047 EMILIN3Q9NT22 766 aa9.36□□□□□ -0.91
CMC2-215ENST00000566047 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
CMC2-215ENST00000566047 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
CMC2-215ENST00000566047 PBX2P40425 430 aa9.33□□□□□ -0.92
CMC2-215ENST00000566047 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
CMC2-215ENST00000566047 AXIN2Q9Y2T1 843 aa9.32□□□□□ -0.92
CMC2-215ENST00000566047 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CMC2-215ENST00000566047 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
CMC2-215ENST00000566047 EVI5O60447 810 aa9.3□□□□□ -0.92
CMC2-215ENST00000566047 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
CMC2-215ENST00000566047 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
CMC2-215ENST00000566047 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
CMC2-215ENST00000566047 ARHGAP33O14559 1287 aa9.27□□□□□ -0.93
CMC2-215ENST00000566047 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
CMC2-215ENST00000566047 FOSBP53539 338 aa9.26□□□□□ -0.93
CMC2-215ENST00000566047 PSEN2P49810 448 aa9.25□□□□□ -0.93
CMC2-215ENST00000566047 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
CMC2-215ENST00000566047 DPYSL4O14531 572 aa9.24□□□□□ -0.93
CMC2-215ENST00000566047 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CMC2-215ENST00000566047 PTGER2P43116 358 aa9.22□□□□□ -0.93
CMC2-215ENST00000566047 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
CMC2-215ENST00000566047 BCL2L12Q9HB09 334 aa9.22□□□□□ -0.93
CMC2-215ENST00000566047 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
CMC2-215ENST00000566047 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
CMC2-215ENST00000566047 ADGRD1Q6QNK2 874 aa9.2□□□□□ -0.94
CMC2-215ENST00000566047 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
CMC2-215ENST00000566047 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
CMC2-215ENST00000566047 E2F4Q16254 413 aa9.19□□□□□ -0.94
CMC2-215ENST00000566047 ADAM33Q9BZ11 813 aa9.19□□□□□ -0.94
CMC2-215ENST00000566047 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
CMC2-215ENST00000566047 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
CMC2-215ENST00000566047 TK2O00142 265 aa9.18□□□□□ -0.94
CMC2-215ENST00000566047 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
CMC2-215ENST00000566047 PHF14O94880 888 aa9.16□□□□□ -0.94
CMC2-215ENST00000566047 PTPREP23469 700 aa9.16□□□□□ -0.94
CMC2-215ENST00000566047 PDIA6Q15084 440 aa9.16□□□□□ -0.94
CMC2-215ENST00000566047 HRO43593 1189 aa9.15□□□□□ -0.94
CMC2-215ENST00000566047 ARIH1Q9Y4X5 557 aaPredicted RBP9.15□□□□□ -0.94
CMC2-215ENST00000566047 TYW1BQ6NUM6 668 aa9.14□□□□□ -0.95
CMC2-215ENST00000566047 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
CMC2-215ENST00000566047 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
CMC2-215ENST00000566047 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
CMC2-215ENST00000566047 DDX12PQ92771 950 aa9.12□□□□□ -0.95
CMC2-215ENST00000566047 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
CMC2-215ENST00000566047 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms