RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
LINC00561-201ENST00000565815 C2orf72A6NCS6 295 aa8.95□□□□□ -0.98
LINC00561-201ENST00000565815 MLLT3P42568 568 aaPredicted RBP8.95□□□□□ -0.98
LINC00561-201ENST00000565815 LMOD2Q6P5Q4 547 aa8.95□□□□□ -0.98
LINC00561-201ENST00000565815 PDE4AP27815 886 aa8.95□□□□□ -0.98
LINC00561-201ENST00000565815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC00561-201ENST00000565815 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
LINC00561-201ENST00000565815 GPHNQ9NQX3 736 aaPredicted RBP8.94□□□□□ -0.98
LINC00561-201ENST00000565815 DPYSL4O14531 572 aa8.94□□□□□ -0.98
LINC00561-201ENST00000565815 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
LINC00561-201ENST00000565815 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
LINC00561-201ENST00000565815 ARHGEF1Q92888 912 aaKnown RBP8.92□□□□□ -0.98
LINC00561-201ENST00000565815 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
LINC00561-201ENST00000565815 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
LINC00561-201ENST00000565815 PLCG2P16885 1265 aa8.9□□□□□ -0.98
LINC00561-201ENST00000565815 KIF3CO14782 793 aa8.89□□□□□ -0.99
LINC00561-201ENST00000565815 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC00561-201ENST00000565815 METRNQ9UJH8 293 aa8.89□□□□□ -0.99
LINC00561-201ENST00000565815 TESPA1A2RU30 521 aaPredicted RBP8.89□□□□□ -0.99
LINC00561-201ENST00000565815 SEC24BO95487 1268 aa8.89□□□□□ -0.99
LINC00561-201ENST00000565815 RBM26Q5T8P6 1007 aaKnown RBP8.88□□□□□ -0.99
LINC00561-201ENST00000565815 PLPP6Q8IY26 295 aa8.87□□□□□ -0.99
LINC00561-201ENST00000565815 IER5LQ5T953 404 aa8.86□□□□□ -0.99
LINC00561-201ENST00000565815 FOXK1P85037 733 aa8.85□□□□□ -0.99
LINC00561-201ENST00000565815 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
LINC00561-201ENST00000565815 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
LINC00561-201ENST00000565815 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
LINC00561-201ENST00000565815 POTEJP0CG39 1038 aa8.82□□□□□ -1
LINC00561-201ENST00000565815 POTEB2H3BUK9 544 aa8.82□□□□□ -1
LINC00561-201ENST00000565815 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
LINC00561-201ENST00000565815 CLCN6P51797 869 aa8.79□□□□□ -1
LINC00561-201ENST00000565815 PRIM1P49642 420 aaKnown RBP8.78□□□□□ -1
LINC00561-201ENST00000565815 SLC39A7Q92504 469 aa8.78□□□□□ -1
LINC00561-201ENST00000565815 G3V3G9 751 aa8.77□□□□□ -1.01
LINC00561-201ENST00000565815 PDIA6Q15084 440 aa8.77□□□□□ -1.01
LINC00561-201ENST00000565815 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
LINC00561-201ENST00000565815 DDX12PQ92771 950 aa8.77□□□□□ -1.01
LINC00561-201ENST00000565815 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1.01
LINC00561-201ENST00000565815 C7P10643 843 aa8.75□□□□□ -1.01
LINC00561-201ENST00000565815 C3orf67Q6ZVT6 689 aa8.73□□□□□ -1.01
LINC00561-201ENST00000565815 L3MBTL3Q96JM7 780 aaPredicted RBP8.72□□□□□ -1.01
LINC00561-201ENST00000565815 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
LINC00561-201ENST00000565815 OXER1Q8TDS5 423 aa8.71□□□□□ -1.01
LINC00561-201ENST00000565815 KHSRPQ92945 711 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00561-201ENST00000565815 BRPF1P55201 1214 aaPredicted RBP8.7□□□□□ -1.02
LINC00561-201ENST00000565815 GPR37O15354 613 aa8.7□□□□□ -1.02
LINC00561-201ENST00000565815 ZMYND10O75800 440 aa8.7□□□□□ -1.02
LINC00561-201ENST00000565815 FECHP22830 423 aa8.7□□□□□ -1.02
LINC00561-201ENST00000565815 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
LINC00561-201ENST00000565815 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
LINC00561-201ENST00000565815 OSBPP22059 807 aa8.67□□□□□ -1.02
LINC00561-201ENST00000565815 EVI5O60447 810 aa8.67□□□□□ -1.02
LINC00561-201ENST00000565815 ABCC9O60706 1549 aa8.66□□□□□ -1.02
LINC00561-201ENST00000565815 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
LINC00561-201ENST00000565815 CDHR5Q9HBB8 845 aa8.66□□□□□ -1.02
LINC00561-201ENST00000565815 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
LINC00561-201ENST00000565815 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
LINC00561-201ENST00000565815 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
LINC00561-201ENST00000565815 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
LINC00561-201ENST00000565815 PTCD2Q8WV60 388 aaKnown RBP8.61□□□□□ -1.03
LINC00561-201ENST00000565815 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
LINC00561-201ENST00000565815 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
LINC00561-201ENST00000565815 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
LINC00561-201ENST00000565815 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
LINC00561-201ENST00000565815 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
LINC00561-201ENST00000565815 NUDT7P0C024 238 aa8.6□□□□□ -1.03
LINC00561-201ENST00000565815 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
LINC00561-201ENST00000565815 HOXB3P14651 431 aaPredicted RBP8.59□□□□□ -1.03
LINC00561-201ENST00000565815 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
LINC00561-201ENST00000565815 PCDHGA10Q9Y5H3 936 aa8.58□□□□□ -1.04
LINC00561-201ENST00000565815 ARSIQ5FYB1 569 aa8.57□□□□□ -1.04
LINC00561-201ENST00000565815 SLAIN1Q8ND83 568 aa8.57□□□□□ -1.04
LINC00561-201ENST00000565815 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
LINC00561-201ENST00000565815 KRI1Q8N9T8 703 aaKnown RBP8.56□□□□□ -1.04
LINC00561-201ENST00000565815 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
LINC00561-201ENST00000565815 NPDC1Q9NQX5 325 aaPredicted RBP8.55□□□□□ -1.04
LINC00561-201ENST00000565815 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
LINC00561-201ENST00000565815 TBC1D12O60347 775 aa8.54□□□□□ -1.04
LINC00561-201ENST00000565815 SLC34A2O95436 690 aa8.54□□□□□ -1.04
LINC00561-201ENST00000565815 PTGER2P43116 358 aa8.54□□□□□ -1.04
LINC00561-201ENST00000565815 PTGDRQ13258 359 aa8.53□□□□□ -1.04
LINC00561-201ENST00000565815 MAP3K7O43318 606 aa8.53□□□□□ -1.04
LINC00561-201ENST00000565815 TRIM66O15016 1216 aa8.52□□□□□ -1.04
LINC00561-201ENST00000565815 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.04
LINC00561-201ENST00000565815 PHOX2BQ99453 314 aa8.52□□□□□ -1.05
LINC00561-201ENST00000565815 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
LINC00561-201ENST00000565815 EN1Q05925 392 aaPredicted RBP8.51□□□□□ -1.05
LINC00561-201ENST00000565815 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
LINC00561-201ENST00000565815 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
LINC00561-201ENST00000565815 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
LINC00561-201ENST00000565815 GNPATO15228 680 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 PDE4DQ08499 809 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 OTUD5Q96G74 571 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 ZNF454Q8N9F8 522 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 AK7Q96M32 723 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
LINC00561-201ENST00000565815 ADAM33Q9BZ11 813 aa8.48□□□□□ -1.05
LINC00561-201ENST00000565815 IRF6O14896 467 aa8.47□□□□□ -1.05
LINC00561-201ENST00000565815 FAM117AQ9C073 453 aa8.47□□□□□ -1.05
LINC00561-201ENST00000565815 LHX6Q9UPM6 363 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms