RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	MAGI2	Q86UL8	1455 aa		18.98	■□□□□ 0.63
KIFC3-222	ENST00000565481	POGZ	Q7Z3K3	1410 aa		18.98	■□□□□ 0.63
KIFC3-222	ENST00000565481	PREX2	Q70Z35	1606 aa		18.96	■□□□□ 0.63
KIFC3-222	ENST00000565481	ZFYVE16	Q7Z3T8	1539 aa		18.96	■□□□□ 0.63
KIFC3-222	ENST00000565481	SCAPER	Q9BY12	1400 aa		18.96	■□□□□ 0.63
KIFC3-222	ENST00000565481	SIGLEC1	Q9BZZ2	1709 aa		18.96	■□□□□ 0.63
KIFC3-222	ENST00000565481	HECW2	Q9P2P5	1572 aa		18.94	■□□□□ 0.62
KIFC3-222	ENST00000565481	EFCAB2	Q5VUJ9	269 aa		18.94	■□□□□ 0.62
KIFC3-222	ENST00000565481	ARHGAP5	Q13017	1502 aa		18.94	■□□□□ 0.62
KIFC3-222	ENST00000565481	CDC42BPA	Q5VT25	1732 aa		18.94	■□□□□ 0.62
KIFC3-222	ENST00000565481	MADD	Q8WXG6	1647 aa		18.93	■□□□□ 0.62
KIFC3-222	ENST00000565481	YEATS2	Q9ULM3	1422 aa		18.92	■□□□□ 0.62
KIFC3-222	ENST00000565481	KDM5C	P41229	1560 aa		18.92	■□□□□ 0.62
KIFC3-222	ENST00000565481	PTPRM	P28827	1452 aa		18.9	■□□□□ 0.62
KIFC3-222	ENST00000565481	ZNF518A	Q6AHZ1	1483 aa		18.9	■□□□□ 0.62
KIFC3-222	ENST00000565481	ITSN2	Q9NZM3	1697 aa		18.88	■□□□□ 0.61
KIFC3-222	ENST00000565481	ABCC1	P33527	1531 aa		18.87	■□□□□ 0.61
KIFC3-222	ENST00000565481	RIMS1	Q86UR5	1692 aa	Known RBP	18.87	■□□□□ 0.61
KIFC3-222	ENST00000565481	CEP162	Q5TB80	1403 aa		18.85	■□□□□ 0.61
KIFC3-222	ENST00000565481	ARID4B	Q4LE39	1312 aa	Predicted RBP	18.85	■□□□□ 0.61
KIFC3-222	ENST00000565481	ATP10A	O60312	1499 aa		18.84	■□□□□ 0.61
KIFC3-222	ENST00000565481	ARHGEF12	Q9NZN5	1544 aa		18.83	■□□□□ 0.6
KIFC3-222	ENST00000565481	FER1L4	A9Z1Z3	1794 aa		18.83	■□□□□ 0.6
KIFC3-222	ENST00000565481	C9orf84	Q5VXU9	1444 aa		18.83	■□□□□ 0.6
KIFC3-222	ENST00000565481	RERE	Q9P2R6	1566 aa		18.81	■□□□□ 0.6
KIFC3-222	ENST00000565481	DIP2C	Q9Y2E4	1556 aa		18.81	■□□□□ 0.6
KIFC3-222	ENST00000565481	MLH3	Q9UHC1	1453 aa		18.81	■□□□□ 0.6
KIFC3-222	ENST00000565481	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.8	■□□□□ 0.6
KIFC3-222	ENST00000565481	ABCA6	Q8N139	1617 aa		18.8	■□□□□ 0.6
KIFC3-222	ENST00000565481	SAMD9L	Q8IVG5	1584 aa		18.8	■□□□□ 0.6
KIFC3-222	ENST00000565481	AFAP1	Q8N556	730 aa		18.79	■□□□□ 0.6
KIFC3-222	ENST00000565481	KIDINS220	Q9ULH0	1771 aa		18.78	■□□□□ 0.6
KIFC3-222	ENST00000565481	TRAPPC8	Q9Y2L5	1435 aa		18.78	■□□□□ 0.6
KIFC3-222	ENST00000565481	EHBP1L1	Q8N3D4	1523 aa		18.76	■□□□□ 0.59
KIFC3-222	ENST00000565481	TIAM1	Q13009	1591 aa		18.74	■□□□□ 0.59
KIFC3-222	ENST00000565481	MTUS2	Q5JR59	1369 aa		18.74	■□□□□ 0.59
KIFC3-222	ENST00000565481	SYCP2	Q9BX26	1530 aa		18.74	■□□□□ 0.59
KIFC3-222	ENST00000565481	LMTK3	Q96Q04	1460 aa		18.72	■□□□□ 0.59
KIFC3-222	ENST00000565481	AGL	P35573	1532 aa		18.72	■□□□□ 0.59
KIFC3-222	ENST00000565481	KIAA1107	Q9UPP5	1409 aa		18.72	■□□□□ 0.59
KIFC3-222	ENST00000565481	PLEKHH2	Q8IVE3	1493 aa		18.71	■□□□□ 0.59
KIFC3-222	ENST00000565481	CCNB3	Q8WWL7	1395 aa		18.7	■□□□□ 0.58
KIFC3-222	ENST00000565481	INO80	Q9ULG1	1556 aa	Predicted RBP	18.68	■□□□□ 0.58
KIFC3-222	ENST00000565481	MLEC	Q14165	292 aa		18.68	■□□□□ 0.58
KIFC3-222	ENST00000565481	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.68	■□□□□ 0.58
KIFC3-222	ENST00000565481	ATP7A	Q04656	1500 aa		18.66	■□□□□ 0.58
KIFC3-222	ENST00000565481	LOC105371045	A0A1W2PR82	267 aa		18.66	■□□□□ 0.58
KIFC3-222	ENST00000565481	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.66	■□□□□ 0.58
KIFC3-222	ENST00000565481	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.66	■□□□□ 0.58
KIFC3-222	ENST00000565481	VPS8	Q8N3P4	1428 aa		18.66	■□□□□ 0.58
KIFC3-222	ENST00000565481	SETD1B	Q9UPS6	1966 aa	Known RBP	18.65	■□□□□ 0.58
KIFC3-222	ENST00000565481	PREX1	Q8TCU6	1659 aa		18.64	■□□□□ 0.57
KIFC3-222	ENST00000565481	PLXNC1	O60486	1568 aa		18.64	■□□□□ 0.57
KIFC3-222	ENST00000565481	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.63	■□□□□ 0.57
KIFC3-222	ENST00000565481	MYT1L	Q9UL68	1186 aa		18.63	■□□□□ 0.57
KIFC3-222	ENST00000565481	C3	P01024	1663 aa		18.63	■□□□□ 0.57
KIFC3-222	ENST00000565481	NCOA2	Q15596	1464 aa		18.62	■□□□□ 0.57
KIFC3-222	ENST00000565481	MBD5	Q9P267	1494 aa		18.62	■□□□□ 0.57
KIFC3-222	ENST00000565481	ADGB	Q8N7X0	1667 aa		18.61	■□□□□ 0.57
KIFC3-222	ENST00000565481	SPAG9	O60271	1321 aa	Known RBP	18.61	■□□□□ 0.57
KIFC3-222	ENST00000565481	MAP3K1	Q13233	1512 aa		18.6	■□□□□ 0.57
KIFC3-222	ENST00000565481	MROH2A	A6NES4	1674 aa		18.59	■□□□□ 0.57
KIFC3-222	ENST00000565481	LRRC9	Q6ZRR7	1453 aa		18.58	■□□□□ 0.56
KIFC3-222	ENST00000565481	ZNF644	Q9H582	1327 aa	Predicted RBP	18.57	■□□□□ 0.56
KIFC3-222	ENST00000565481	A2M	P01023	1474 aa		18.55	■□□□□ 0.56
KIFC3-222	ENST00000565481	CAMSAP2	Q08AD1	1489 aa		18.55	■□□□□ 0.56
KIFC3-222	ENST00000565481	PLPPR3	Q6T4P5	718 aa		18.55	■□□□□ 0.56
KIFC3-222	ENST00000565481	CNTLN	Q9NXG0	1405 aa		18.55	■□□□□ 0.56
KIFC3-222	ENST00000565481	CEBPA	P49715	358 aa	Predicted RBP	18.54	■□□□□ 0.56
KIFC3-222	ENST00000565481	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.54	■□□□□ 0.56
KIFC3-222	ENST00000565481	ARHGEF5	Q12774	1597 aa		18.53	■□□□□ 0.56
KIFC3-222	ENST00000565481	HSPA2	P54652	639 aa		18.52	■□□□□ 0.56
KIFC3-222	ENST00000565481	CCDC141	Q6ZP82	1450 aa		18.52	■□□□□ 0.55
KIFC3-222	ENST00000565481	CLTC	Q00610	1675 aa	Known RBP	18.5	■□□□□ 0.55
KIFC3-222	ENST00000565481	ILDR1	Q86SU0	546 aa	Predicted RBP	18.5	■□□□□ 0.55
KIFC3-222	ENST00000565481	STRC	Q7RTU9	1775 aa		18.49	■□□□□ 0.55
KIFC3-222	ENST00000565481	UHRF1BP1	Q6BDS2	1440 aa		18.49	■□□□□ 0.55
KIFC3-222	ENST00000565481	ESF1	Q9H501	851 aa	Known RBP	18.47	■□□□□ 0.55
KIFC3-222	ENST00000565481	RSPH4A	Q5TD94	716 aa		18.46	■□□□□ 0.55
KIFC3-222	ENST00000565481	NPAT	Q14207	1427 aa		18.46	■□□□□ 0.55
KIFC3-222	ENST00000565481	KANK4	Q5T7N3	995 aa	Predicted RBP	18.45	■□□□□ 0.54
KIFC3-222	ENST00000565481	DHX29	Q7Z478	1369 aa	Known RBP	18.44	■□□□□ 0.54
KIFC3-222	ENST00000565481	MAST1	Q9Y2H9	1570 aa		18.44	■□□□□ 0.54
KIFC3-222	ENST00000565481	ZMYM3	Q14202	1370 aa		18.43	■□□□□ 0.54
KIFC3-222	ENST00000565481	MYOM3	Q5VTT5	1437 aa		18.43	■□□□□ 0.54
KIFC3-222	ENST00000565481	MIA2	Q96PC5	1412 aa		18.43	■□□□□ 0.54
KIFC3-222	ENST00000565481	PPP6R1	Q9UPN7	881 aa		18.42	■□□□□ 0.54
KIFC3-222	ENST00000565481	FAM135A	Q9P2D6	1515 aa		18.42	■□□□□ 0.54
KIFC3-222	ENST00000565481	ZNF142	P52746	1687 aa	Predicted RBP	18.41	■□□□□ 0.54
KIFC3-222	ENST00000565481	MYO3A	Q8NEV4	1616 aa		18.39	■□□□□ 0.53
KIFC3-222	ENST00000565481	GGT6	Q6P531	493 aa		18.38	■□□□□ 0.53
KIFC3-222	ENST00000565481	PTPRK	Q15262	1439 aa		18.38	■□□□□ 0.53
KIFC3-222	ENST00000565481	CROCC2	H7BZ55	1655 aa		18.38	■□□□□ 0.53
KIFC3-222	ENST00000565481	RNF17	Q9BXT8	1623 aa	Known RBP	18.37	■□□□□ 0.53
KIFC3-222	ENST00000565481	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.36	■□□□□ 0.53
KIFC3-222	ENST00000565481	KDM5D	Q9BY66	1539 aa		18.35	■□□□□ 0.53
KIFC3-222	ENST00000565481	FBXO41	Q8TF61	875 aa		18.35	■□□□□ 0.53
KIFC3-222	ENST00000565481	PTPN23	Q9H3S7	1636 aa		18.34	■□□□□ 0.53
KIFC3-222	ENST00000565481	NCOA1	Q15788	1441 aa		18.34	■□□□□ 0.53
KIFC3-222	ENST00000565481	TSPY4	P0CV99	314 aa		18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms