RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
CAPN3-214ENST00000565274 ERBB3P21860 1342 aa8.91□□□□□ -0.98
CAPN3-214ENST00000565274 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
CAPN3-214ENST00000565274 MS4A4AQ96JQ5 239 aa8.91□□□□□ -0.98
CAPN3-214ENST00000565274 HOXB1P14653 301 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-214ENST00000565274 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
CAPN3-214ENST00000565274 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-214ENST00000565274 STK24Q9Y6E0 443 aa8.87□□□□□ -0.99
CAPN3-214ENST00000565274 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
CAPN3-214ENST00000565274 NLRP6P59044 892 aa8.84□□□□□ -0.99
CAPN3-214ENST00000565274 ECM2O94769 699 aaPredicted RBP8.83□□□□□ -1
CAPN3-214ENST00000565274 STK25O00506 426 aa8.82□□□□□ -1
CAPN3-214ENST00000565274 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
CAPN3-214ENST00000565274 ARSIQ5FYB1 569 aa8.79□□□□□ -1
CAPN3-214ENST00000565274 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
CAPN3-214ENST00000565274 GPR153Q6NV75 609 aa8.78□□□□□ -1
CAPN3-214ENST00000565274 MFRPQ9BY79 579 aa8.78□□□□□ -1
CAPN3-214ENST00000565274 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
CAPN3-214ENST00000565274 KHSRPQ92945 711 aaKnown RBP eCLIP8.77□□□□□ -1.01
CAPN3-214ENST00000565274 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
CAPN3-214ENST00000565274 RGL2O15211 777 aa8.74□□□□□ -1.01
CAPN3-214ENST00000565274 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
CAPN3-214ENST00000565274 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
CAPN3-214ENST00000565274 PKD2Q13563 968 aa8.72□□□□□ -1.01
CAPN3-214ENST00000565274 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-214ENST00000565274 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
CAPN3-214ENST00000565274 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-214ENST00000565274 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
CAPN3-214ENST00000565274 NUDT7P0C024 238 aa8.68□□□□□ -1.02
CAPN3-214ENST00000565274 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
CAPN3-214ENST00000565274 KIF3CO14782 793 aa8.66□□□□□ -1.02
CAPN3-214ENST00000565274 PPP1R37O75864 691 aa8.65□□□□□ -1.02
CAPN3-214ENST00000565274 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.03
CAPN3-214ENST00000565274 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
CAPN3-214ENST00000565274 ARXQ96QS3 562 aa8.62□□□□□ -1.03
CAPN3-214ENST00000565274 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
CAPN3-214ENST00000565274 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
CAPN3-214ENST00000565274 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
CAPN3-214ENST00000565274 ZCCHC6Q5VYS8 1495 aaKnown RBP8.58□□□□□ -1.04
CAPN3-214ENST00000565274 PTGER2P43116 358 aa8.57□□□□□ -1.04
CAPN3-214ENST00000565274 SLC34A2O95436 690 aa8.56□□□□□ -1.04
CAPN3-214ENST00000565274 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
CAPN3-214ENST00000565274 AMER1Q5JTC6 1135 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-214ENST00000565274 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
CAPN3-214ENST00000565274 PBX2P40425 430 aa8.53□□□□□ -1.04
CAPN3-214ENST00000565274 PLPP6Q8IY26 295 aa8.53□□□□□ -1.04
CAPN3-214ENST00000565274 HS6ST3Q8IZP7 471 aa8.51□□□□□ -1.05
CAPN3-214ENST00000565274 DSG2Q14126 1118 aa8.49□□□□□ -1.05
CAPN3-214ENST00000565274 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
CAPN3-214ENST00000565274 FOXK1P85037 733 aa8.48□□□□□ -1.05
CAPN3-214ENST00000565274 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
CAPN3-214ENST00000565274 GPHNQ9NQX3 736 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-214ENST00000565274 PSEN2P49810 448 aa8.47□□□□□ -1.05
CAPN3-214ENST00000565274 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
CAPN3-214ENST00000565274 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
CAPN3-214ENST00000565274 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-214ENST00000565274 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
CAPN3-214ENST00000565274 KDM4FA0A1W2PPD8 638 aa8.45□□□□□ -1.06
CAPN3-214ENST00000565274 TBC1D12O60347 775 aa8.45□□□□□ -1.06
CAPN3-214ENST00000565274 DMRTA1Q5VZB9 504 aa8.45□□□□□ -1.06
CAPN3-214ENST00000565274 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
CAPN3-214ENST00000565274 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
CAPN3-214ENST00000565274 EIF5BO60841 1220 aaKnown RBP8.43□□□□□ -1.06
CAPN3-214ENST00000565274 NKX1-1Q15270 411 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-214ENST00000565274 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
CAPN3-214ENST00000565274 KCNK17Q96T54 332 aa8.41□□□□□ -1.06
CAPN3-214ENST00000565274 HCSTQ9UBK5 93 aa8.41□□□□□ -1.06
CAPN3-214ENST00000565274 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
CAPN3-214ENST00000565274 KCTD12Q96CX2 325 aaKnown RBP8.39□□□□□ -1.07
CAPN3-214ENST00000565274 TK2O00142 265 aa8.38□□□□□ -1.07
CAPN3-214ENST00000565274 KCNH8Q96L42 1107 aa8.38□□□□□ -1.07
CAPN3-214ENST00000565274 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
CAPN3-214ENST00000565274 HRO43593 1189 aa8.36□□□□□ -1.07
CAPN3-214ENST00000565274 RANGAP1P46060 587 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-214ENST00000565274 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
CAPN3-214ENST00000565274 OXER1Q8TDS5 423 aa8.36□□□□□ -1.07
CAPN3-214ENST00000565274 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
CAPN3-214ENST00000565274 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
CAPN3-214ENST00000565274 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
CAPN3-214ENST00000565274 SHROOM4Q9ULL8 1493 aa8.33□□□□□ -1.08
CAPN3-214ENST00000565274 PDE4AP27815 886 aa8.32□□□□□ -1.08
CAPN3-214ENST00000565274 PTPN5P54829 565 aa8.32□□□□□ -1.08
CAPN3-214ENST00000565274 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
CAPN3-214ENST00000565274 NCKAP5LQ9HCH0 1330 aa8.31□□□□□ -1.08
CAPN3-214ENST00000565274 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
CAPN3-214ENST00000565274 VPS9D1Q9Y2B5 631 aa8.31□□□□□ -1.08
CAPN3-214ENST00000565274 HOMEZQ8IX15 550 aa8.3□□□□□ -1.08
CAPN3-214ENST00000565274 GTPBP6O43824 516 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-214ENST00000565274 EVI5O60447 810 aa8.28□□□□□ -1.08
CAPN3-214ENST00000565274 FOSBP53539 338 aa8.28□□□□□ -1.08
CAPN3-214ENST00000565274 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
CAPN3-214ENST00000565274 TULP1O00294 542 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-214ENST00000565274 PTPREP23469 700 aa8.27□□□□□ -1.09
CAPN3-214ENST00000565274 MYO15BQ96JP2 1530 aa8.27□□□□□ -1.09
CAPN3-214ENST00000565274 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
CAPN3-214ENST00000565274 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
CAPN3-214ENST00000565274 DDX27Q96GQ7 796 aaKnown RBP8.26□□□□□ -1.09
CAPN3-214ENST00000565274 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
CAPN3-214ENST00000565274 ZDHHC16Q969W1 377 aa8.24□□□□□ -1.09
CAPN3-214ENST00000565274 ADAM33Q9BZ11 813 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms