RNA–Protein interactions for RNA: ENST00000565264.1

SIN3A-206, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-206ENST00000565264 CLIP1P30622 1438 aa26.67■■□□□ 1.86
SIN3A-206ENST00000565264 ZFYVE16Q7Z3T8 1539 aa26.66■■□□□ 1.86
SIN3A-206ENST00000565264 POGZQ7Z3K3 1410 aa26.65■■□□□ 1.86
SIN3A-206ENST00000565264 MADDQ8WXG6 1647 aa26.65■■□□□ 1.86
SIN3A-206ENST00000565264 PTPRMP28827 1452 aa26.64■■□□□ 1.86
SIN3A-206ENST00000565264 SIGLEC1Q9BZZ2 1709 aa26.64■■□□□ 1.85
SIN3A-206ENST00000565264 ARHGAP5Q13017 1502 aa26.63■■□□□ 1.85
SIN3A-206ENST00000565264 CCDC18Q5T9S5 1454 aa26.62■■□□□ 1.85
SIN3A-206ENST00000565264 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
SIN3A-206ENST00000565264 FYCO1Q9BQS8 1478 aa26.59■■□□□ 1.85
SIN3A-206ENST00000565264 RIMS1Q86UR5 1692 aaKnown RBP26.57■■□□□ 1.84
SIN3A-206ENST00000565264 MAGI2Q86UL8 1455 aa26.56■■□□□ 1.84
SIN3A-206ENST00000565264 CDC42BPBQ9Y5S2 1711 aa26.56■■□□□ 1.84
SIN3A-206ENST00000565264 PREX2Q70Z35 1606 aa26.53■■□□□ 1.84
SIN3A-206ENST00000565264 MLECQ14165 292 aa26.52■■□□□ 1.84
SIN3A-206ENST00000565264 AFAP1Q8N556 730 aa26.51■■□□□ 1.83
SIN3A-206ENST00000565264 ZNF518AQ6AHZ1 1483 aa26.5■■□□□ 1.83
SIN3A-206ENST00000565264 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
SIN3A-206ENST00000565264 KDM5CP41229 1560 aa26.47■■□□□ 1.83
SIN3A-206ENST00000565264 CDC42BPAQ5VT25 1732 aa26.47■■□□□ 1.83
SIN3A-206ENST00000565264 ATP10AO60312 1499 aa26.47■■□□□ 1.83
SIN3A-206ENST00000565264 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
SIN3A-206ENST00000565264 ABCC1P33527 1531 aa26.45■■□□□ 1.83
SIN3A-206ENST00000565264 ARHGEF12Q9NZN5 1544 aa26.45■■□□□ 1.83
SIN3A-206ENST00000565264 MYT1LQ9UL68 1186 aa26.44■■□□□ 1.82
SIN3A-206ENST00000565264 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
SIN3A-206ENST00000565264 ITSN2Q9NZM3 1697 aa26.42■■□□□ 1.82
SIN3A-206ENST00000565264 FER1L4A9Z1Z3 1794 aa26.42■■□□□ 1.82
SIN3A-206ENST00000565264 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
SIN3A-206ENST00000565264 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
SIN3A-206ENST00000565264 LMTK3Q96Q04 1460 aa26.39■■□□□ 1.82
SIN3A-206ENST00000565264 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
SIN3A-206ENST00000565264 ABCA6Q8N139 1617 aa26.39■■□□□ 1.81
SIN3A-206ENST00000565264 GPATCH8Q9UKJ3 1502 aaKnown RBP26.36■■□□□ 1.81
SIN3A-206ENST00000565264 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
SIN3A-206ENST00000565264 ILDR1Q86SU0 546 aaPredicted RBP26.34■■□□□ 1.81
SIN3A-206ENST00000565264 MLH3Q9UHC1 1453 aa26.34■■□□□ 1.81
SIN3A-206ENST00000565264 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.81
SIN3A-206ENST00000565264 SYCP2Q9BX26 1530 aa26.33■■□□□ 1.81
SIN3A-206ENST00000565264 KIDINS220Q9ULH0 1771 aa26.3■■□□□ 1.8
SIN3A-206ENST00000565264 HSPA2P54652 639 aa26.29■■□□□ 1.8
SIN3A-206ENST00000565264 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
SIN3A-206ENST00000565264 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
SIN3A-206ENST00000565264 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
SIN3A-206ENST00000565264 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
SIN3A-206ENST00000565264 HNRNPMP52272 730 aaKnown RBP eCLIP26.27■■□□□ 1.8
SIN3A-206ENST00000565264 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
SIN3A-206ENST00000565264 EHBP1L1Q8N3D4 1523 aa26.25■■□□□ 1.79
SIN3A-206ENST00000565264 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
SIN3A-206ENST00000565264 AGLP35573 1532 aa26.2■■□□□ 1.79
SIN3A-206ENST00000565264 SPAG9O60271 1321 aaKnown RBP26.19■■□□□ 1.78
SIN3A-206ENST00000565264 ZNF644Q9H582 1327 aaPredicted RBP26.18■■□□□ 1.78
SIN3A-206ENST00000565264 PLEKHH2Q8IVE3 1493 aa26.17■■□□□ 1.78
SIN3A-206ENST00000565264 KIAA1107Q9UPP5 1409 aa26.17■■□□□ 1.78
SIN3A-206ENST00000565264 ATP7AQ04656 1500 aa26.17■■□□□ 1.78
SIN3A-206ENST00000565264 INO80Q9ULG1 1556 aaPredicted RBP26.16■■□□□ 1.78
SIN3A-206ENST00000565264 PREX1Q8TCU6 1659 aa26.15■■□□□ 1.78
SIN3A-206ENST00000565264 C3P01024 1663 aa26.13■■□□□ 1.77
SIN3A-206ENST00000565264 SUPT6HQ7KZ85 1726 aaKnown RBP26.13■■□□□ 1.77
SIN3A-206ENST00000565264 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
SIN3A-206ENST00000565264 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
SIN3A-206ENST00000565264 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
SIN3A-206ENST00000565264 MBD5Q9P267 1494 aa26.07■■□□□ 1.76
SIN3A-206ENST00000565264 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
SIN3A-206ENST00000565264 A2MP01023 1474 aa26.06■■□□□ 1.76
SIN3A-206ENST00000565264 UHRF1BP1Q6BDS2 1440 aa26.05■■□□□ 1.76
SIN3A-206ENST00000565264 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
SIN3A-206ENST00000565264 CNTLNQ9NXG0 1405 aa26.02■■□□□ 1.76
SIN3A-206ENST00000565264 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
SIN3A-206ENST00000565264 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
SIN3A-206ENST00000565264 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
SIN3A-206ENST00000565264 SETD1BQ9UPS6 1966 aaKnown RBP25.98■■□□□ 1.75
SIN3A-206ENST00000565264 GGT6Q6P531 493 aa25.97■■□□□ 1.75
SIN3A-206ENST00000565264 CCDC141Q6ZP82 1450 aa25.97■■□□□ 1.75
SIN3A-206ENST00000565264 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
SIN3A-206ENST00000565264 KANK4Q5T7N3 995 aaPredicted RBP25.96■■□□□ 1.75
SIN3A-206ENST00000565264 FBXO41Q8TF61 875 aa25.96■■□□□ 1.75
SIN3A-206ENST00000565264 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
SIN3A-206ENST00000565264 ZMYM3Q14202 1370 aa25.95■■□□□ 1.74
SIN3A-206ENST00000565264 RTEL1-TNFRSF6BF6WH68 1400 aa25.93■■□□□ 1.74
SIN3A-206ENST00000565264 NPATQ14207 1427 aa25.88■■□□□ 1.73
SIN3A-206ENST00000565264 DHX29Q7Z478 1369 aaKnown RBP25.88■■□□□ 1.73
SIN3A-206ENST00000565264 MAP3K1Q13233 1512 aa25.87■■□□□ 1.73
SIN3A-206ENST00000565264 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
SIN3A-206ENST00000565264 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
SIN3A-206ENST00000565264 KIF3BO15066 747 aa25.83■■□□□ 1.73
SIN3A-206ENST00000565264 MYO3AQ8NEV4 1616 aa25.83■■□□□ 1.73
SIN3A-206ENST00000565264 RSPH4AQ5TD94 716 aa25.82■■□□□ 1.72
SIN3A-206ENST00000565264 CERKQ8TCT0 537 aa25.82■■□□□ 1.72
SIN3A-206ENST00000565264 MYOM3Q5VTT5 1437 aa25.81■■□□□ 1.72
SIN3A-206ENST00000565264 CAMSAP1Q5T5Y3 1602 aa25.81■■□□□ 1.72
SIN3A-206ENST00000565264 NCOA1Q15788 1441 aa25.8■■□□□ 1.72
SIN3A-206ENST00000565264 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
SIN3A-206ENST00000565264 TSPY4P0CV99 314 aa25.79■■□□□ 1.72
SIN3A-206ENST00000565264 TSPY10P0CW01 314 aa25.79■■□□□ 1.72
SIN3A-206ENST00000565264 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
SIN3A-206ENST00000565264 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
SIN3A-206ENST00000565264 CEP170BQ9Y4F5 1589 aaPredicted RBP25.76■■□□□ 1.71
SIN3A-206ENST00000565264 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
SIN3A-206ENST00000565264 PTPRTO14522 1441 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms