RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 PLCH2O75038 1416 aa19.13■□□□□ 0.65
NSMCE1-208ENST00000565070 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
NSMCE1-208ENST00000565070 MIA2Q96PC5 1412 aa19.13■□□□□ 0.65
NSMCE1-208ENST00000565070 CDC42BPBQ9Y5S2 1711 aa19.12■□□□□ 0.65
NSMCE1-208ENST00000565070 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
NSMCE1-208ENST00000565070 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
NSMCE1-208ENST00000565070 CFDP1Q9UEE9 299 aaPredicted RBP19.11■□□□□ 0.65
NSMCE1-208ENST00000565070 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
NSMCE1-208ENST00000565070 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
NSMCE1-208ENST00000565070 TEX14Q8IWB6 1497 aa19.07■□□□□ 0.64
NSMCE1-208ENST00000565070 EFCAB2Q5VUJ9 269 aa19.07■□□□□ 0.64
NSMCE1-208ENST00000565070 FANCAO15360 1455 aa19.06■□□□□ 0.64
NSMCE1-208ENST00000565070 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
NSMCE1-208ENST00000565070 TSPOAP1O95153 1857 aa19.05■□□□□ 0.64
NSMCE1-208ENST00000565070 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
NSMCE1-208ENST00000565070 PLEKHH2Q8IVE3 1493 aa19.04■□□□□ 0.64
NSMCE1-208ENST00000565070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.04■□□□□ 0.64
NSMCE1-208ENST00000565070 NEO1Q92859 1461 aa19.03■□□□□ 0.64
NSMCE1-208ENST00000565070 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
NSMCE1-208ENST00000565070 PPRC1Q5VV67 1664 aaKnown RBP19.02■□□□□ 0.64
NSMCE1-208ENST00000565070 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.64
NSMCE1-208ENST00000565070 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
NSMCE1-208ENST00000565070 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
NSMCE1-208ENST00000565070 KIAA1107Q9UPP5 1409 aa18.99■□□□□ 0.63
NSMCE1-208ENST00000565070 ABCC1P33527 1531 aa18.98■□□□□ 0.63
NSMCE1-208ENST00000565070 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
NSMCE1-208ENST00000565070 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
NSMCE1-208ENST00000565070 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
NSMCE1-208ENST00000565070 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
NSMCE1-208ENST00000565070 ARHGEF5Q12774 1597 aa18.95■□□□□ 0.62
NSMCE1-208ENST00000565070 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
NSMCE1-208ENST00000565070 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
NSMCE1-208ENST00000565070 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
NSMCE1-208ENST00000565070 SCAPERQ9BY12 1400 aa18.92■□□□□ 0.62
NSMCE1-208ENST00000565070 CCDC141Q6ZP82 1450 aa18.91■□□□□ 0.62
NSMCE1-208ENST00000565070 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
NSMCE1-208ENST00000565070 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 DENND4BO75064 1496 aaPredicted RBP18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 HNRNPMP52272 730 aaKnown RBP eCLIP18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 ZNF518AQ6AHZ1 1483 aa18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 DAPK1P53355 1430 aa18.89■□□□□ 0.61
NSMCE1-208ENST00000565070 SHANK2Q9UPX8 1470 aa18.87■□□□□ 0.61
NSMCE1-208ENST00000565070 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
NSMCE1-208ENST00000565070 ABCC5O15440 1437 aa18.87■□□□□ 0.61
NSMCE1-208ENST00000565070 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
NSMCE1-208ENST00000565070 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
NSMCE1-208ENST00000565070 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
NSMCE1-208ENST00000565070 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
NSMCE1-208ENST00000565070 RICTORQ6R327 1708 aa18.85■□□□□ 0.61
NSMCE1-208ENST00000565070 KDM5CP41229 1560 aa18.84■□□□□ 0.61
NSMCE1-208ENST00000565070 MAST1Q9Y2H9 1570 aa18.84■□□□□ 0.61
NSMCE1-208ENST00000565070 ADGBQ8N7X0 1667 aa18.83■□□□□ 0.6
NSMCE1-208ENST00000565070 ITGAEP38570 1179 aa18.82■□□□□ 0.6
NSMCE1-208ENST00000565070 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
NSMCE1-208ENST00000565070 KDM6BO15054 1643 aa18.81■□□□□ 0.6
NSMCE1-208ENST00000565070 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
NSMCE1-208ENST00000565070 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
NSMCE1-208ENST00000565070 SPAG9O60271 1321 aaKnown RBP18.8■□□□□ 0.6
NSMCE1-208ENST00000565070 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
NSMCE1-208ENST00000565070 ZMYM4Q5VZL5 1548 aa18.8■□□□□ 0.6
NSMCE1-208ENST00000565070 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
NSMCE1-208ENST00000565070 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
NSMCE1-208ENST00000565070 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
NSMCE1-208ENST00000565070 ADGRL2O95490 1459 aa18.79■□□□□ 0.6
NSMCE1-208ENST00000565070 MLH3Q9UHC1 1453 aa18.78■□□□□ 0.6
NSMCE1-208ENST00000565070 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
NSMCE1-208ENST00000565070 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
NSMCE1-208ENST00000565070 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
NSMCE1-208ENST00000565070 ZFYVE16Q7Z3T8 1539 aa18.77■□□□□ 0.6
NSMCE1-208ENST00000565070 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
NSMCE1-208ENST00000565070 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
NSMCE1-208ENST00000565070 COL17A1Q9UMD9 1497 aaPredicted RBP18.76■□□□□ 0.59
NSMCE1-208ENST00000565070 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
NSMCE1-208ENST00000565070 KIDINS220Q9ULH0 1771 aa18.74■□□□□ 0.59
NSMCE1-208ENST00000565070 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
NSMCE1-208ENST00000565070 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
NSMCE1-208ENST00000565070 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
NSMCE1-208ENST00000565070 DHX57Q6P158 1386 aaKnown RBP18.71■□□□□ 0.59
NSMCE1-208ENST00000565070 GCC2Q8IWJ2 1684 aa18.71■□□□□ 0.59
NSMCE1-208ENST00000565070 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
NSMCE1-208ENST00000565070 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
NSMCE1-208ENST00000565070 KIF15Q9NS87 1388 aa18.7■□□□□ 0.58
NSMCE1-208ENST00000565070 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
NSMCE1-208ENST00000565070 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
NSMCE1-208ENST00000565070 ABCA6Q8N139 1617 aa18.68■□□□□ 0.58
NSMCE1-208ENST00000565070 NAIPQ13075 1403 aa18.68■□□□□ 0.58
NSMCE1-208ENST00000565070 ARHGEF40Q8TER5 1519 aa18.68■□□□□ 0.58
NSMCE1-208ENST00000565070 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
NSMCE1-208ENST00000565070 DIP2CQ9Y2E4 1556 aa18.67■□□□□ 0.58
NSMCE1-208ENST00000565070 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
NSMCE1-208ENST00000565070 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
NSMCE1-208ENST00000565070 ATP10AO60312 1499 aa18.64■□□□□ 0.57
NSMCE1-208ENST00000565070 ANKRD50Q9ULJ7 1429 aa18.64■□□□□ 0.57
NSMCE1-208ENST00000565070 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
NSMCE1-208ENST00000565070 REREQ9P2R6 1566 aa18.63■□□□□ 0.57
NSMCE1-208ENST00000565070 A2MP01023 1474 aa18.63■□□□□ 0.57
NSMCE1-208ENST00000565070 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
NSMCE1-208ENST00000565070 EIF2AK4Q9P2K8 1649 aaKnown RBP18.62■□□□□ 0.57
NSMCE1-208ENST00000565070 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms