RNA–Protein interactions for RNA: ENST00000564843.1

LINC01413-201, Transcript of long intergenic non-protein coding RNA 1413, humanhuman

TSL 3 BASIC

Gene LINC01413, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01413-201ENST00000564843 ARID4BQ4LE39 1312 aaPredicted RBP27.55■■■□□ 2
LINC01413-201ENST00000564843 TROQ12816 1431 aaPredicted RBP27.53■■■□□ 2
LINC01413-201ENST00000564843 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
LINC01413-201ENST00000564843 SCAPERQ9BY12 1400 aa27.53■■■□□ 2
LINC01413-201ENST00000564843 CDC42BPBQ9Y5S2 1711 aa27.51■■□□□ 1.99
LINC01413-201ENST00000564843 MAGI2Q86UL8 1455 aa27.47■■□□□ 1.99
LINC01413-201ENST00000564843 CDK11AQ9UQ88 783 aaPredicted RBP27.46■■□□□ 1.99
LINC01413-201ENST00000564843 CASKIN1Q8WXD9 1431 aa27.46■■□□□ 1.99
LINC01413-201ENST00000564843 ARHGAP5Q13017 1502 aa27.45■■□□□ 1.98
LINC01413-201ENST00000564843 ILDR1Q86SU0 546 aaPredicted RBP27.44■■□□□ 1.98
LINC01413-201ENST00000564843 FER1L4A9Z1Z3 1794 aa27.43■■□□□ 1.98
LINC01413-201ENST00000564843 CLIP1P30622 1438 aa27.42■■□□□ 1.98
LINC01413-201ENST00000564843 PREX2Q70Z35 1606 aa27.42■■□□□ 1.98
LINC01413-201ENST00000564843 EFCAB2Q5VUJ9 269 aa27.42■■□□□ 1.98
LINC01413-201ENST00000564843 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
LINC01413-201ENST00000564843 CDC42BPAQ5VT25 1732 aa27.4■■□□□ 1.98
LINC01413-201ENST00000564843 KDM5CP41229 1560 aa27.39■■□□□ 1.97
LINC01413-201ENST00000564843 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
LINC01413-201ENST00000564843 FYCO1Q9BQS8 1478 aa27.37■■□□□ 1.97
LINC01413-201ENST00000564843 ATP10AO60312 1499 aa27.35■■□□□ 1.97
LINC01413-201ENST00000564843 ZNF518AQ6AHZ1 1483 aa27.35■■□□□ 1.97
LINC01413-201ENST00000564843 ITSN2Q9NZM3 1697 aa27.34■■□□□ 1.97
LINC01413-201ENST00000564843 MLECQ14165 292 aa27.34■■□□□ 1.97
LINC01413-201ENST00000564843 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.97
LINC01413-201ENST00000564843 ABCC1P33527 1531 aa27.32■■□□□ 1.96
LINC01413-201ENST00000564843 ARHGEF12Q9NZN5 1544 aa27.32■■□□□ 1.96
LINC01413-201ENST00000564843 AFAP1Q8N556 730 aa27.32■■□□□ 1.96
LINC01413-201ENST00000564843 DIP2CQ9Y2E4 1556 aa27.31■■□□□ 1.96
LINC01413-201ENST00000564843 ABCA6Q8N139 1617 aa27.31■■□□□ 1.96
LINC01413-201ENST00000564843 PLPPR3Q6T4P5 718 aa27.3■■□□□ 1.96
LINC01413-201ENST00000564843 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
LINC01413-201ENST00000564843 KIDINS220Q9ULH0 1771 aa27.24■■□□□ 1.95
LINC01413-201ENST00000564843 SAMD9LQ8IVG5 1584 aa27.22■■□□□ 1.95
LINC01413-201ENST00000564843 REREQ9P2R6 1566 aa27.22■■□□□ 1.95
LINC01413-201ENST00000564843 MLH3Q9UHC1 1453 aa27.21■■□□□ 1.95
LINC01413-201ENST00000564843 HSPA2P54652 639 aa27.2■■□□□ 1.94
LINC01413-201ENST00000564843 GPATCH8Q9UKJ3 1502 aaKnown RBP27.17■■□□□ 1.94
LINC01413-201ENST00000564843 MYT1LQ9UL68 1186 aa27.16■■□□□ 1.94
LINC01413-201ENST00000564843 PREX1Q8TCU6 1659 aa27.16■■□□□ 1.94
LINC01413-201ENST00000564843 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
LINC01413-201ENST00000564843 CEBPAP49715 358 aaPredicted RBP27.13■■□□□ 1.93
LINC01413-201ENST00000564843 C3P01024 1663 aa27.12■■□□□ 1.93
LINC01413-201ENST00000564843 AGLP35573 1532 aa27.11■■□□□ 1.93
LINC01413-201ENST00000564843 SETD1BQ9UPS6 1966 aaKnown RBP27.1■■□□□ 1.93
LINC01413-201ENST00000564843 ZNF777Q9ULD5 760 aaPredicted RBP27.1■■□□□ 1.93
LINC01413-201ENST00000564843 CEP162Q5TB80 1403 aa27.07■■□□□ 1.92
LINC01413-201ENST00000564843 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LINC01413-201ENST00000564843 SUPT6HQ7KZ85 1726 aaKnown RBP27.05■■□□□ 1.92
LINC01413-201ENST00000564843 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
LINC01413-201ENST00000564843 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
LINC01413-201ENST00000564843 INO80Q9ULG1 1556 aaPredicted RBP27.04■■□□□ 1.92
LINC01413-201ENST00000564843 STRCQ7RTU9 1775 aa27.02■■□□□ 1.92
LINC01413-201ENST00000564843 EHBP1L1Q8N3D4 1523 aa27.02■■□□□ 1.92
LINC01413-201ENST00000564843 ATP7AQ04656 1500 aa27.01■■□□□ 1.91
LINC01413-201ENST00000564843 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
LINC01413-201ENST00000564843 CFDP1Q9UEE9 299 aaPredicted RBP26.99■■□□□ 1.91
LINC01413-201ENST00000564843 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
LINC01413-201ENST00000564843 FBXO41Q8TF61 875 aa26.98■■□□□ 1.91
LINC01413-201ENST00000564843 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
LINC01413-201ENST00000564843 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
LINC01413-201ENST00000564843 PLEKHH2Q8IVE3 1493 aa26.96■■□□□ 1.91
LINC01413-201ENST00000564843 ZNF644Q9H582 1327 aaPredicted RBP26.95■■□□□ 1.91
LINC01413-201ENST00000564843 MROH2AA6NES4 1674 aa26.94■■□□□ 1.9
LINC01413-201ENST00000564843 UHRF1BP1Q6BDS2 1440 aa26.93■■□□□ 1.9
LINC01413-201ENST00000564843 CLTCQ00610 1675 aaKnown RBP26.91■■□□□ 1.9
LINC01413-201ENST00000564843 ADGBQ8N7X0 1667 aa26.9■■□□□ 1.9
LINC01413-201ENST00000564843 MBD5Q9P267 1494 aa26.9■■□□□ 1.9
LINC01413-201ENST00000564843 A2MP01023 1474 aa26.88■■□□□ 1.89
LINC01413-201ENST00000564843 CNTLNQ9NXG0 1405 aa26.87■■□□□ 1.89
LINC01413-201ENST00000564843 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
LINC01413-201ENST00000564843 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
LINC01413-201ENST00000564843 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
LINC01413-201ENST00000564843 CAMSAP2Q08AD1 1489 aa26.8■■□□□ 1.88
LINC01413-201ENST00000564843 ZMYM3Q14202 1370 aa26.79■■□□□ 1.88
LINC01413-201ENST00000564843 CERKQ8TCT0 537 aa26.78■■□□□ 1.88
LINC01413-201ENST00000564843 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
LINC01413-201ENST00000564843 NPATQ14207 1427 aa26.76■■□□□ 1.87
LINC01413-201ENST00000564843 MYO3AQ8NEV4 1616 aa26.76■■□□□ 1.87
LINC01413-201ENST00000564843 CCDC141Q6ZP82 1450 aa26.74■■□□□ 1.87
LINC01413-201ENST00000564843 RTEL1-TNFRSF6BF6WH68 1400 aa26.74■■□□□ 1.87
LINC01413-201ENST00000564843 ZNF142P52746 1687 aaPredicted RBP26.74■■□□□ 1.87
LINC01413-201ENST00000564843 GGT6Q6P531 493 aa26.74■■□□□ 1.87
LINC01413-201ENST00000564843 LRRC9Q6ZRR7 1453 aa26.73■■□□□ 1.87
LINC01413-201ENST00000564843 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
LINC01413-201ENST00000564843 CAMSAP1Q5T5Y3 1602 aa26.72■■□□□ 1.87
LINC01413-201ENST00000564843 PTPRKQ15262 1439 aa26.71■■□□□ 1.87
LINC01413-201ENST00000564843 PTPRTO14522 1441 aa26.7■■□□□ 1.86
LINC01413-201ENST00000564843 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
LINC01413-201ENST00000564843 DMRT2Q9Y5R5 561 aa26.68■■□□□ 1.86
LINC01413-201ENST00000564843 DHX29Q7Z478 1369 aaKnown RBP26.68■■□□□ 1.86
LINC01413-201ENST00000564843 CEP170BQ9Y4F5 1589 aaPredicted RBP26.66■■□□□ 1.86
LINC01413-201ENST00000564843 KANK4Q5T7N3 995 aaPredicted RBP26.65■■□□□ 1.86
LINC01413-201ENST00000564843 LTBP4Q8N2S1 1624 aa26.63■■□□□ 1.85
LINC01413-201ENST00000564843 MAP3K1Q13233 1512 aa26.61■■□□□ 1.85
LINC01413-201ENST00000564843 KIF3BO15066 747 aa26.59■■□□□ 1.85
LINC01413-201ENST00000564843 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
LINC01413-201ENST00000564843 KDM5DQ9BY66 1539 aa26.58■■□□□ 1.85
LINC01413-201ENST00000564843 NCKAP5LQ9HCH0 1330 aa26.58■■□□□ 1.85
LINC01413-201ENST00000564843 MAST1Q9Y2H9 1570 aa26.58■■□□□ 1.85
LINC01413-201ENST00000564843 DNMT1P26358 1616 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms