RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.019e-8■■■□□ 15.5
SIN3A-205ENST00000564778 PLCH2O75038 1416 aa15.12■□□□□ 0.01
SIN3A-205ENST00000564778 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
SIN3A-205ENST00000564778 PTPN23Q9H3S7 1636 aa15.12■□□□□ 0.01
SIN3A-205ENST00000564778 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
SIN3A-205ENST00000564778 ARHGAP5Q13017 1502 aa15.08■□□□□ 0.01
SIN3A-205ENST00000564778 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
SIN3A-205ENST00000564778 CD109Q6YHK3 1445 aa15.08■□□□□ 0
SIN3A-205ENST00000564778 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0
SIN3A-205ENST00000564778 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
SIN3A-205ENST00000564778 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
SIN3A-205ENST00000564778 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
SIN3A-205ENST00000564778 PLEKHH2Q8IVE3 1493 aa15.05■□□□□ -0
SIN3A-205ENST00000564778 PPRC1Q5VV67 1664 aaKnown RBP15.04■□□□□ -0
SIN3A-205ENST00000564778 KDM6BO15054 1643 aa15.04■□□□□ -0
SIN3A-205ENST00000564778 ABCC1P33527 1531 aa15.04■□□□□ -0
SIN3A-205ENST00000564778 FANCAO15360 1455 aa15.04■□□□□ -0
SIN3A-205ENST00000564778 NEO1Q92859 1461 aa15.03■□□□□ -0
SIN3A-205ENST00000564778 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
SIN3A-205ENST00000564778 DNMT1P26358 1616 aaKnown RBP15.03■□□□□ -0
SIN3A-205ENST00000564778 ARHGEF5Q12774 1597 aa15.02■□□□□ -0
SIN3A-205ENST00000564778 TEX14Q8IWB6 1497 aa15.02■□□□□ -0
SIN3A-205ENST00000564778 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
SIN3A-205ENST00000564778 MBD5Q9P267 1494 aa15.01□□□□□ -0.01
SIN3A-205ENST00000564778 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
SIN3A-205ENST00000564778 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
SIN3A-205ENST00000564778 SHANK2Q9UPX8 1470 aa14.99□□□□□ -0.01
SIN3A-205ENST00000564778 CROCC2H7BZ55 1655 aa14.99□□□□□ -0.01
SIN3A-205ENST00000564778 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
SIN3A-205ENST00000564778 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
SIN3A-205ENST00000564778 DAPK1P53355 1430 aa14.98□□□□□ -0.01
SIN3A-205ENST00000564778 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
SIN3A-205ENST00000564778 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
SIN3A-205ENST00000564778 CCDC141Q6ZP82 1450 aa14.97□□□□□ -0.01
SIN3A-205ENST00000564778 ABCC5O15440 1437 aa14.97□□□□□ -0.01
SIN3A-205ENST00000564778 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
SIN3A-205ENST00000564778 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
SIN3A-205ENST00000564778 PTPRKQ15262 1439 aa14.94□□□□□ -0.02
SIN3A-205ENST00000564778 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
SIN3A-205ENST00000564778 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
SIN3A-205ENST00000564778 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
SIN3A-205ENST00000564778 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
SIN3A-205ENST00000564778 KDM5CP41229 1560 aa14.92□□□□□ -0.02
SIN3A-205ENST00000564778 ADGBQ8N7X0 1667 aa14.92□□□□□ -0.02
SIN3A-205ENST00000564778 TRAPPC8Q9Y2L5 1435 aa14.92□□□□□ -0.02
SIN3A-205ENST00000564778 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
SIN3A-205ENST00000564778 ROCK1Q13464 1354 aa14.91□□□□□ -0.02
SIN3A-205ENST00000564778 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
SIN3A-205ENST00000564778 C9orf84Q5VXU9 1444 aa14.91□□□□□ -0.02
SIN3A-205ENST00000564778 RICTORQ6R327 1708 aa14.9□□□□□ -0.02
SIN3A-205ENST00000564778 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
SIN3A-205ENST00000564778 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
SIN3A-205ENST00000564778 ZFYVE16Q7Z3T8 1539 aa14.89□□□□□ -0.03
SIN3A-205ENST00000564778 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
SIN3A-205ENST00000564778 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
SIN3A-205ENST00000564778 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
SIN3A-205ENST00000564778 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
SIN3A-205ENST00000564778 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
SIN3A-205ENST00000564778 ZMYM4Q5VZL5 1548 aa14.87□□□□□ -0.03
SIN3A-205ENST00000564778 RTEL1-TNFRSF6BF6WH68 1400 aa14.87□□□□□ -0.03
SIN3A-205ENST00000564778 ITGAEP38570 1179 aa14.86□□□□□ -0.03
SIN3A-205ENST00000564778 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
SIN3A-205ENST00000564778 NCOA1Q15788 1441 aa14.85□□□□□ -0.03
SIN3A-205ENST00000564778 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
SIN3A-205ENST00000564778 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
SIN3A-205ENST00000564778 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
SIN3A-205ENST00000564778 TSPY4P0CV99 314 aa14.84□□□□□ -0.03
SIN3A-205ENST00000564778 TSPY10P0CW01 314 aa14.84□□□□□ -0.03
SIN3A-205ENST00000564778 ANKRD30AQ9BXX3 1397 aa14.84□□□□□ -0.03
SIN3A-205ENST00000564778 NAIPQ13075 1403 aa14.83□□□□□ -0.03
SIN3A-205ENST00000564778 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
SIN3A-205ENST00000564778 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
SIN3A-205ENST00000564778 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
SIN3A-205ENST00000564778 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
SIN3A-205ENST00000564778 MAGI2Q86UL8 1455 aa14.81□□□□□ -0.04
SIN3A-205ENST00000564778 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
SIN3A-205ENST00000564778 KIF15Q9NS87 1388 aa14.8□□□□□ -0.04
SIN3A-205ENST00000564778 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
SIN3A-205ENST00000564778 ABCA6Q8N139 1617 aa14.78□□□□□ -0.04
SIN3A-205ENST00000564778 DUOX2Q9NRD8 1548 aa14.78□□□□□ -0.04
SIN3A-205ENST00000564778 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
SIN3A-205ENST00000564778 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.04
SIN3A-205ENST00000564778 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
SIN3A-205ENST00000564778 ERBINQ96RT1 1412 aa14.76□□□□□ -0.05
SIN3A-205ENST00000564778 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
SIN3A-205ENST00000564778 RRP7BPQ9NSQ0 103 aa14.76□□□□□ -0.05
SIN3A-205ENST00000564778 ANKRD50Q9ULJ7 1429 aa14.75□□□□□ -0.05
SIN3A-205ENST00000564778 HRCP23327 699 aa14.75□□□□□ -0.05
SIN3A-205ENST00000564778 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
SIN3A-205ENST00000564778 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
SIN3A-205ENST00000564778 YEATS2Q9ULM3 1422 aa14.73□□□□□ -0.05
SIN3A-205ENST00000564778 BCORL1Q5H9F3 1711 aa14.72□□□□□ -0.05
SIN3A-205ENST00000564778 A2MP01023 1474 aa14.72□□□□□ -0.05
SIN3A-205ENST00000564778 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
SIN3A-205ENST00000564778 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
SIN3A-205ENST00000564778 UNC13BO14795 1591 aa14.7□□□□□ -0.06
SIN3A-205ENST00000564778 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
SIN3A-205ENST00000564778 KDM5DQ9BY66 1539 aa14.69□□□□□ -0.06
SIN3A-205ENST00000564778 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
SIN3A-205ENST00000564778 ATP10AO60312 1499 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms