RNA–Protein interactions for RNA: ENST00000564732.1

ATP2A1-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2A1, Length 831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-208ENST00000564732 RIMS1Q86UR5 1692 aaKnown RBP23.48■■□□□ 1.35
ATP2A1-208ENST00000564732 MAGI2Q86UL8 1455 aa23.47■■□□□ 1.35
ATP2A1-208ENST00000564732 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
ATP2A1-208ENST00000564732 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.34
ATP2A1-208ENST00000564732 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
ATP2A1-208ENST00000564732 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
ATP2A1-208ENST00000564732 CDK11AQ9UQ88 783 aaPredicted RBP23.42■■□□□ 1.34
ATP2A1-208ENST00000564732 CLIP1P30622 1438 aa23.4■■□□□ 1.34
ATP2A1-208ENST00000564732 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
ATP2A1-208ENST00000564732 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
ATP2A1-208ENST00000564732 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
ATP2A1-208ENST00000564732 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
ATP2A1-208ENST00000564732 FER1L4A9Z1Z3 1794 aa23.36■■□□□ 1.33
ATP2A1-208ENST00000564732 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
ATP2A1-208ENST00000564732 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
ATP2A1-208ENST00000564732 KDM5CP41229 1560 aa23.35■■□□□ 1.33
ATP2A1-208ENST00000564732 ZNF518AQ6AHZ1 1483 aa23.35■■□□□ 1.33
ATP2A1-208ENST00000564732 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
ATP2A1-208ENST00000564732 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.33
ATP2A1-208ENST00000564732 ATP10AO60312 1499 aa23.32■■□□□ 1.32
ATP2A1-208ENST00000564732 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
ATP2A1-208ENST00000564732 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
ATP2A1-208ENST00000564732 ABCC1P33527 1531 aa23.28■■□□□ 1.32
ATP2A1-208ENST00000564732 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
ATP2A1-208ENST00000564732 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
ATP2A1-208ENST00000564732 MLECQ14165 292 aa23.26■■□□□ 1.31
ATP2A1-208ENST00000564732 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
ATP2A1-208ENST00000564732 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
ATP2A1-208ENST00000564732 AFAP1Q8N556 730 aa23.24■■□□□ 1.31
ATP2A1-208ENST00000564732 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
ATP2A1-208ENST00000564732 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
ATP2A1-208ENST00000564732 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
ATP2A1-208ENST00000564732 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
ATP2A1-208ENST00000564732 HSPA2P54652 639 aa23.17■■□□□ 1.3
ATP2A1-208ENST00000564732 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
ATP2A1-208ENST00000564732 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
ATP2A1-208ENST00000564732 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
ATP2A1-208ENST00000564732 AGLP35573 1532 aa23.13■■□□□ 1.29
ATP2A1-208ENST00000564732 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
ATP2A1-208ENST00000564732 SYCP2Q9BX26 1530 aa23.12■■□□□ 1.29
ATP2A1-208ENST00000564732 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
ATP2A1-208ENST00000564732 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
ATP2A1-208ENST00000564732 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
ATP2A1-208ENST00000564732 C3P01024 1663 aa23.08■■□□□ 1.29
ATP2A1-208ENST00000564732 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
ATP2A1-208ENST00000564732 ZNF777Q9ULD5 760 aaPredicted RBP23.03■■□□□ 1.28
ATP2A1-208ENST00000564732 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 KIAA1107Q9UPP5 1409 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 EHBP1L1Q8N3D4 1523 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
ATP2A1-208ENST00000564732 UHRF1BP1Q6BDS2 1440 aa23■■□□□ 1.27
ATP2A1-208ENST00000564732 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
ATP2A1-208ENST00000564732 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
ATP2A1-208ENST00000564732 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
ATP2A1-208ENST00000564732 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
ATP2A1-208ENST00000564732 SPAG9O60271 1321 aaKnown RBP22.98■■□□□ 1.27
ATP2A1-208ENST00000564732 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
ATP2A1-208ENST00000564732 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
ATP2A1-208ENST00000564732 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
ATP2A1-208ENST00000564732 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
ATP2A1-208ENST00000564732 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
ATP2A1-208ENST00000564732 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
ATP2A1-208ENST00000564732 A2MP01023 1474 aa22.92■■□□□ 1.26
ATP2A1-208ENST00000564732 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
ATP2A1-208ENST00000564732 MBD5Q9P267 1494 aa22.89■■□□□ 1.25
ATP2A1-208ENST00000564732 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
ATP2A1-208ENST00000564732 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
ATP2A1-208ENST00000564732 ZNF644Q9H582 1327 aaPredicted RBP22.87■■□□□ 1.25
ATP2A1-208ENST00000564732 NPATQ14207 1427 aa22.86■■□□□ 1.25
ATP2A1-208ENST00000564732 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
ATP2A1-208ENST00000564732 ZMYM3Q14202 1370 aa22.83■■□□□ 1.25
ATP2A1-208ENST00000564732 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
ATP2A1-208ENST00000564732 PTPRTO14522 1441 aa22.82■■□□□ 1.24
ATP2A1-208ENST00000564732 NCOA1Q15788 1441 aa22.82■■□□□ 1.24
ATP2A1-208ENST00000564732 MYO3AQ8NEV4 1616 aa22.81■■□□□ 1.24
ATP2A1-208ENST00000564732 RTEL1-TNFRSF6BF6WH68 1400 aa22.81■■□□□ 1.24
ATP2A1-208ENST00000564732 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
ATP2A1-208ENST00000564732 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
ATP2A1-208ENST00000564732 CAMSAP1Q5T5Y3 1602 aa22.78■■□□□ 1.24
ATP2A1-208ENST00000564732 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
ATP2A1-208ENST00000564732 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
ATP2A1-208ENST00000564732 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
ATP2A1-208ENST00000564732 GGT6Q6P531 493 aa22.75■■□□□ 1.23
ATP2A1-208ENST00000564732 CEP170BQ9Y4F5 1589 aaPredicted RBP22.74■■□□□ 1.23
ATP2A1-208ENST00000564732 ARHGEF5Q12774 1597 aa22.73■■□□□ 1.23
ATP2A1-208ENST00000564732 DHX29Q7Z478 1369 aaKnown RBP22.73■■□□□ 1.23
ATP2A1-208ENST00000564732 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
ATP2A1-208ENST00000564732 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
ATP2A1-208ENST00000564732 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
ATP2A1-208ENST00000564732 PLA2R1Q13018 1463 aa22.69■■□□□ 1.22
ATP2A1-208ENST00000564732 FAM135AQ9P2D6 1515 aa22.68■■□□□ 1.22
ATP2A1-208ENST00000564732 KDM5DQ9BY66 1539 aa22.67■■□□□ 1.22
ATP2A1-208ENST00000564732 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
ATP2A1-208ENST00000564732 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
ATP2A1-208ENST00000564732 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
ATP2A1-208ENST00000564732 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
ATP2A1-208ENST00000564732 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms