RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-223ENST00000564343 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
TCF4-223ENST00000564343 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
TCF4-223ENST00000564343 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
TCF4-223ENST00000564343 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
TCF4-223ENST00000564343 NLRP6P59044 892 aa11.17□□□□□ -0.62
TCF4-223ENST00000564343 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
TCF4-223ENST00000564343 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
TCF4-223ENST00000564343 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
TCF4-223ENST00000564343 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
TCF4-223ENST00000564343 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
TCF4-223ENST00000564343 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
TCF4-223ENST00000564343 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
TCF4-223ENST00000564343 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
TCF4-223ENST00000564343 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
TCF4-223ENST00000564343 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
TCF4-223ENST00000564343 ERBB3P21860 1342 aa11.06□□□□□ -0.64
TCF4-223ENST00000564343 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
TCF4-223ENST00000564343 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
TCF4-223ENST00000564343 GPR153Q6NV75 609 aa11□□□□□ -0.65
TCF4-223ENST00000564343 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■□□ 17.1
TCF4-223ENST00000564343 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
TCF4-223ENST00000564343 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
TCF4-223ENST00000564343 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
TCF4-223ENST00000564343 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
TCF4-223ENST00000564343 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
TCF4-223ENST00000564343 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
TCF4-223ENST00000564343 PPP1R37O75864 691 aa10.9□□□□□ -0.66
TCF4-223ENST00000564343 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
TCF4-223ENST00000564343 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
TCF4-223ENST00000564343 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
TCF4-223ENST00000564343 KIF3CO14782 793 aa10.86□□□□□ -0.67
TCF4-223ENST00000564343 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
TCF4-223ENST00000564343 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
TCF4-223ENST00000564343 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
TCF4-223ENST00000564343 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
TCF4-223ENST00000564343 NUDT7P0C024 238 aa10.82□□□□□ -0.68
TCF4-223ENST00000564343 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
TCF4-223ENST00000564343 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
TCF4-223ENST00000564343 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
TCF4-223ENST00000564343 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
TCF4-223ENST00000564343 SHROOM4Q9ULL8 1493 aa10.81□□□□□ -0.68
TCF4-223ENST00000564343 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
TCF4-223ENST00000564343 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
TCF4-223ENST00000564343 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
TCF4-223ENST00000564343 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
TCF4-223ENST00000564343 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
TCF4-223ENST00000564343 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
TCF4-223ENST00000564343 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
TCF4-223ENST00000564343 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
TCF4-223ENST00000564343 SLC34A2O95436 690 aa10.75□□□□□ -0.69
TCF4-223ENST00000564343 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
TCF4-223ENST00000564343 FOXK1P85037 733 aa10.71□□□□□ -0.69
TCF4-223ENST00000564343 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
TCF4-223ENST00000564343 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
TCF4-223ENST00000564343 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
TCF4-223ENST00000564343 PLPP6Q8IY26 295 aa10.68□□□□□ -0.7
TCF4-223ENST00000564343 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
TCF4-223ENST00000564343 DSG2Q14126 1118 aa10.64□□□□□ -0.71
TCF4-223ENST00000564343 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
TCF4-223ENST00000564343 TBC1D12O60347 775 aa10.63□□□□□ -0.71
TCF4-223ENST00000564343 PDE4AP27815 886 aa10.63□□□□□ -0.71
TCF4-223ENST00000564343 CRISPLD2Q9H0B8 497 aa10.63□□□□□ -0.71
TCF4-223ENST00000564343 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
TCF4-223ENST00000564343 PSEN2P49810 448 aa10.58□□□□□ -0.72
TCF4-223ENST00000564343 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
TCF4-223ENST00000564343 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
TCF4-223ENST00000564343 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
TCF4-223ENST00000564343 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
TCF4-223ENST00000564343 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
TCF4-223ENST00000564343 PBX2P40425 430 aa10.55□□□□□ -0.72
TCF4-223ENST00000564343 PTGER2P43116 358 aa10.55□□□□□ -0.72
TCF4-223ENST00000564343 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
TCF4-223ENST00000564343 OXER1Q8TDS5 423 aa10.53□□□□□ -0.72
TCF4-223ENST00000564343 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
TCF4-223ENST00000564343 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
TCF4-223ENST00000564343 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
TCF4-223ENST00000564343 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.73
TCF4-223ENST00000564343 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.51□□□□□ -0.73
TCF4-223ENST00000564343 MFSD10Q14728 455 aa10.49□□□□□ -0.73
TCF4-223ENST00000564343 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
TCF4-223ENST00000564343 HRO43593 1189 aa10.46□□□□□ -0.73
TCF4-223ENST00000564343 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
TCF4-223ENST00000564343 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
TCF4-223ENST00000564343 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
TCF4-223ENST00000564343 KCNK17Q96T54 332 aa10.43□□□□□ -0.74
TCF4-223ENST00000564343 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
TCF4-223ENST00000564343 TK2O00142 265 aa10.41□□□□□ -0.74
TCF4-223ENST00000564343 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
TCF4-223ENST00000564343 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
TCF4-223ENST00000564343 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
TCF4-223ENST00000564343 HCSTQ9UBK5 93 aa10.41□□□□□ -0.74
TCF4-223ENST00000564343 EVI5O60447 810 aa10.4□□□□□ -0.74
TCF4-223ENST00000564343 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
TCF4-223ENST00000564343 CUX2O14529 1486 aa10.37□□□□□ -0.75
TCF4-223ENST00000564343 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
TCF4-223ENST00000564343 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
TCF4-223ENST00000564343 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
TCF4-223ENST00000564343 FOSBP53539 338 aa10.36□□□□□ -0.75
TCF4-223ENST00000564343 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
TCF4-223ENST00000564343 PTPN5P54829 565 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms