RNA–Protein interactions for RNA: ENST00000564257.1

NEIL1-203, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-203ENST00000564257 ARID4BQ4LE39 1312 aaPredicted RBP34.9■■■■□ 3.18
NEIL1-203ENST00000564257 POGZQ7Z3K3 1410 aa34.89■■■■□ 3.18
NEIL1-203ENST00000564257 ZFYVE16Q7Z3T8 1539 aa34.88■■■■□ 3.17
NEIL1-203ENST00000564257 BCORL1Q5H9F3 1711 aa34.86■■■■□ 3.17
NEIL1-203ENST00000564257 CDC42BPBQ9Y5S2 1711 aa34.86■■■■□ 3.17
NEIL1-203ENST00000564257 ADAMTSL3P82987 1691 aa34.86■■■■□ 3.17
NEIL1-203ENST00000564257 PREX2Q70Z35 1606 aa34.84■■■■□ 3.17
NEIL1-203ENST00000564257 MAGI2Q86UL8 1455 aa34.84■■■■□ 3.17
NEIL1-203ENST00000564257 CEP162Q5TB80 1403 aa34.81■■■■□ 3.16
NEIL1-203ENST00000564257 YEATS2Q9ULM3 1422 aa34.81■■■■□ 3.16
NEIL1-203ENST00000564257 CDC42BPAQ5VT25 1732 aa34.77■■■■□ 3.16
NEIL1-203ENST00000564257 MADDQ8WXG6 1647 aa34.76■■■■□ 3.15
NEIL1-203ENST00000564257 ZNF518AQ6AHZ1 1483 aa34.76■■■■□ 3.15
NEIL1-203ENST00000564257 HECW2Q9P2P5 1572 aa34.74■■■■□ 3.15
NEIL1-203ENST00000564257 PTPRMP28827 1452 aa34.72■■■■□ 3.15
NEIL1-203ENST00000564257 SIGLEC1Q9BZZ2 1709 aa34.71■■■■□ 3.15
NEIL1-203ENST00000564257 KDM5CP41229 1560 aa34.69■■■■□ 3.14
NEIL1-203ENST00000564257 ABCC1P33527 1531 aa34.68■■■■□ 3.14
NEIL1-203ENST00000564257 RIMS1Q86UR5 1692 aaKnown RBP34.67■■■■□ 3.14
NEIL1-203ENST00000564257 ITSN2Q9NZM3 1697 aa34.67■■■■□ 3.14
NEIL1-203ENST00000564257 AFAP1Q8N556 730 aa34.66■■■■□ 3.14
NEIL1-203ENST00000564257 MYT1LQ9UL68 1186 aa34.66■■■■□ 3.14
NEIL1-203ENST00000564257 MTUS2Q5JR59 1369 aa34.65■■■■□ 3.14
NEIL1-203ENST00000564257 ATP10AO60312 1499 aa34.65■■■■□ 3.14
NEIL1-203ENST00000564257 C9orf84Q5VXU9 1444 aa34.64■■■■□ 3.14
NEIL1-203ENST00000564257 LOC105371045A0A1W2PR82 267 aa34.6■■■■□ 3.13
NEIL1-203ENST00000564257 ARHGEF12Q9NZN5 1544 aa34.6■■■■□ 3.13
NEIL1-203ENST00000564257 ZNF777Q9ULD5 760 aaPredicted RBP34.59■■■■□ 3.13
NEIL1-203ENST00000564257 GPATCH8Q9UKJ3 1502 aaKnown RBP34.59■■■■□ 3.13
NEIL1-203ENST00000564257 MLECQ14165 292 aa34.58■■■■□ 3.13
NEIL1-203ENST00000564257 TRAPPC8Q9Y2L5 1435 aa34.57■■■■□ 3.13
NEIL1-203ENST00000564257 EHBP1L1Q8N3D4 1523 aa34.57■■■■□ 3.12
NEIL1-203ENST00000564257 SAMD9LQ8IVG5 1584 aa34.57■■■■□ 3.12
NEIL1-203ENST00000564257 FER1L4A9Z1Z3 1794 aa34.57■■■■□ 3.12
NEIL1-203ENST00000564257 CCNB3Q8WWL7 1395 aa34.56■■■■□ 3.12
NEIL1-203ENST00000564257 DIP2CQ9Y2E4 1556 aa34.55■■■■□ 3.12
NEIL1-203ENST00000564257 MLH3Q9UHC1 1453 aa34.53■■■■□ 3.12
NEIL1-203ENST00000564257 ABCA6Q8N139 1617 aa34.53■■■■□ 3.12
NEIL1-203ENST00000564257 SYCP2Q9BX26 1530 aa34.51■■■■□ 3.12
NEIL1-203ENST00000564257 CFDP1Q9UEE9 299 aaPredicted RBP34.5■■■■□ 3.11
NEIL1-203ENST00000564257 PLPPR3Q6T4P5 718 aa34.48■■■■□ 3.11
NEIL1-203ENST00000564257 TIAM1Q13009 1591 aa34.46■■■■□ 3.11
NEIL1-203ENST00000564257 REREQ9P2R6 1566 aa34.46■■■■□ 3.11
NEIL1-203ENST00000564257 KIDINS220Q9ULH0 1771 aa34.46■■■■□ 3.11
NEIL1-203ENST00000564257 PLEKHH2Q8IVE3 1493 aa34.45■■■■□ 3.1
NEIL1-203ENST00000564257 VPS8Q8N3P4 1428 aa34.43■■■■□ 3.1
NEIL1-203ENST00000564257 HNRNPMP52272 730 aaKnown RBP eCLIP34.41■■■■□ 3.1
NEIL1-203ENST00000564257 SUPT6HQ7KZ85 1726 aaKnown RBP34.41■■■■□ 3.1
NEIL1-203ENST00000564257 KIAA1107Q9UPP5 1409 aa34.39■■■■□ 3.1
NEIL1-203ENST00000564257 SPAG9O60271 1321 aaKnown RBP34.35■■■■□ 3.09
NEIL1-203ENST00000564257 LMTK3Q96Q04 1460 aa34.33■■■■□ 3.09
NEIL1-203ENST00000564257 AGLP35573 1532 aa34.33■■■■□ 3.09
NEIL1-203ENST00000564257 NCOA2Q15596 1464 aa34.33■■■■□ 3.09
NEIL1-203ENST00000564257 ATP7AQ04656 1500 aa34.32■■■■□ 3.08
NEIL1-203ENST00000564257 INO80Q9ULG1 1556 aaPredicted RBP34.3■■■■□ 3.08
NEIL1-203ENST00000564257 ZNF644Q9H582 1327 aaPredicted RBP34.28■■■■□ 3.08
NEIL1-203ENST00000564257 ESF1Q9H501 851 aaKnown RBP34.24■■■■□ 3.07
NEIL1-203ENST00000564257 LRRC9Q6ZRR7 1453 aa34.24■■■■□ 3.07
NEIL1-203ENST00000564257 CEBPAP49715 358 aaPredicted RBP34.21■■■■□ 3.07
NEIL1-203ENST00000564257 MBD5Q9P267 1494 aa34.2■■■■□ 3.06
NEIL1-203ENST00000564257 PREX1Q8TCU6 1659 aa34.19■■■■□ 3.06
NEIL1-203ENST00000564257 CAMSAP2Q08AD1 1489 aa34.19■■■■□ 3.06
NEIL1-203ENST00000564257 MAP3K1Q13233 1512 aa34.19■■■■□ 3.06
NEIL1-203ENST00000564257 ADGBQ8N7X0 1667 aa34.18■■■■□ 3.06
NEIL1-203ENST00000564257 A2MP01023 1474 aa34.17■■■■□ 3.06
NEIL1-203ENST00000564257 C3P01024 1663 aa34.17■■■■□ 3.06
NEIL1-203ENST00000564257 PLXNC1O60486 1568 aa34.15■■■■□ 3.06
NEIL1-203ENST00000564257 HSPA2P54652 639 aa34.15■■■■□ 3.06
NEIL1-203ENST00000564257 CCDC141Q6ZP82 1450 aa34.12■■■■□ 3.05
NEIL1-203ENST00000564257 CNTLNQ9NXG0 1405 aa34.11■■■■□ 3.05
NEIL1-203ENST00000564257 KANK4Q5T7N3 995 aaPredicted RBP34.1■■■■□ 3.05
NEIL1-203ENST00000564257 RTEL1-TNFRSF6BF6WH68 1400 aa34.08■■■■□ 3.05
NEIL1-203ENST00000564257 APLP2Q06481 763 aa34.06■■■■□ 3.04
NEIL1-203ENST00000564257 MROH2AA6NES4 1674 aa34.06■■■■□ 3.04
NEIL1-203ENST00000564257 SETD1BQ9UPS6 1966 aaKnown RBP34.05■■■■□ 3.04
NEIL1-203ENST00000564257 UHRF1BP1Q6BDS2 1440 aa34.04■■■■□ 3.04
NEIL1-203ENST00000564257 RSPH4AQ5TD94 716 aa34.04■■■■□ 3.04
NEIL1-203ENST00000564257 CLTCQ00610 1675 aaKnown RBP34.03■■■■□ 3.04
NEIL1-203ENST00000564257 ARHGEF5Q12774 1597 aa34.03■■■■□ 3.04
NEIL1-203ENST00000564257 GGT6Q6P531 493 aa34■■■■□ 3.03
NEIL1-203ENST00000564257 MYOM3Q5VTT5 1437 aa33.98■■■■□ 3.03
NEIL1-203ENST00000564257 ILDR1Q86SU0 546 aaPredicted RBP33.97■■■■□ 3.03
NEIL1-203ENST00000564257 DHX29Q7Z478 1369 aaKnown RBP33.96■■■■□ 3.03
NEIL1-203ENST00000564257 TSPY4P0CV99 314 aa33.95■■■■□ 3.03
NEIL1-203ENST00000564257 TSPY10P0CW01 314 aa33.95■■■■□ 3.03
NEIL1-203ENST00000564257 MIA2Q96PC5 1412 aa33.95■■■■□ 3.02
NEIL1-203ENST00000564257 ZMYM3Q14202 1370 aa33.94■■■■□ 3.02
NEIL1-203ENST00000564257 NPATQ14207 1427 aa33.88■■■■□ 3.01
NEIL1-203ENST00000564257 MAST1Q9Y2H9 1570 aa33.87■■■■□ 3.01
NEIL1-203ENST00000564257 PPP6R1Q9UPN7 881 aa33.87■■■■□ 3.01
NEIL1-203ENST00000564257 KIF3BO15066 747 aa33.86■■■■□ 3.01
NEIL1-203ENST00000564257 STRCQ7RTU9 1775 aa33.84■■■■□ 3.01
NEIL1-203ENST00000564257 PTPN23Q9H3S7 1636 aa33.81■■■■□ 3
NEIL1-203ENST00000564257 MYO3AQ8NEV4 1616 aa33.79■■■■□ 3
NEIL1-203ENST00000564257 KDM5DQ9BY66 1539 aa33.78■■■■□ 3
NEIL1-203ENST00000564257 PTPRKQ15262 1439 aa33.78■■■■□ 3
NEIL1-203ENST00000564257 FAM135AQ9P2D6 1515 aa33.76■■■■□ 3
NEIL1-203ENST00000564257 CROCC2H7BZ55 1655 aa33.76■■■□□ 2.99
NEIL1-203ENST00000564257 DMRT2Q9Y5R5 561 aa33.75■■■□□ 2.99
NEIL1-203ENST00000564257 ZNF142P52746 1687 aaPredicted RBP33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms