RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PPP1R15BQ5SWA1 713 aa5.24□□□□□ -1.57
CHD9-209ENST00000564255 BMP2KQ9NSY1 1161 aaPredicted RBP5.23□□□□□ -1.57
CHD9-209ENST00000564255 MLLT3P42568 568 aaPredicted RBP5.22□□□□□ -1.57
CHD9-209ENST00000564255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.22□□□□□ -1.573e-7■■■■□ 25.9
CHD9-209ENST00000564255 HAX1O00165 279 aa5.22□□□□□ -1.57
CHD9-209ENST00000564255 C14orf37Q86TY3 774 aa5.22□□□□□ -1.57
CHD9-209ENST00000564255 SPDYE16A6NNV3 312 aaPredicted RBP5.21□□□□□ -1.58
CHD9-209ENST00000564255 RBM26Q5T8P6 1007 aaKnown RBP5.21□□□□□ -1.58
CHD9-209ENST00000564255 AK7Q96M32 723 aa5.21□□□□□ -1.58
CHD9-209ENST00000564255 EMILIN3Q9NT22 766 aa5.21□□□□□ -1.58
CHD9-209ENST00000564255 PDIA6Q15084 440 aa5.2□□□□□ -1.58
CHD9-209ENST00000564255 GPIHBP1Q8IV16 184 aa5.2□□□□□ -1.58
CHD9-209ENST00000564255 FOXK1P85037 733 aa5.19□□□□□ -1.58
CHD9-209ENST00000564255 DSG2Q14126 1118 aa5.19□□□□□ -1.58
CHD9-209ENST00000564255 MICALL2Q8IY33 904 aa5.19□□□□□ -1.58
CHD9-209ENST00000564255 TMEM121BQ9BXQ6 578 aaPredicted RBP5.19□□□□□ -1.58
CHD9-209ENST00000564255 DPYSL4O14531 572 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 DPY19L2Q6NUT2 758 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 ARXQ96QS3 562 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 GPR37O15354 613 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 PDCD7Q8N8D1 485 aaKnown RBP5.18□□□□□ -1.58
CHD9-209ENST00000564255 TRIM35Q9UPQ4 493 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 KIF3CO14782 793 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 CLCN6P51797 869 aa5.18□□□□□ -1.58
CHD9-209ENST00000564255 DAXXQ9UER7 740 aaPredicted RBP5.17□□□□□ -1.58
CHD9-209ENST00000564255 GALR2O43603 387 aaPredicted RBP5.16□□□□□ -1.58
CHD9-209ENST00000564255 IRX5P78411 483 aaPredicted RBP5.16□□□□□ -1.58
CHD9-209ENST00000564255 TMC2Q8TDI7 906 aa5.16□□□□□ -1.58
CHD9-209ENST00000564255 TRIM66O15016 1216 aa5.16□□□□□ -1.58
CHD9-209ENST00000564255 EVX2Q03828 476 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 IER5LQ5T953 404 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 PLPP6Q8IY26 295 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 KRI1Q8N9T8 703 aaKnown RBP5.14□□□□□ -1.59
CHD9-209ENST00000564255 ATN1P54259 1190 aaPredicted RBP5.14□□□□□ -1.59
CHD9-209ENST00000564255 ATMINO43313 823 aaPredicted RBP5.14□□□□□ -1.59
CHD9-209ENST00000564255 PDE4DQ08499 809 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 KDM4CQ9H3R0 1056 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 GPBP1L1Q9HC44 474 aaPredicted RBP5.14□□□□□ -1.59
CHD9-209ENST00000564255 BOLA1Q9Y3E2 137 aa5.14□□□□□ -1.59
CHD9-209ENST00000564255 ASTLQ6HA08 431 aaPredicted RBP5.13□□□□□ -1.59
CHD9-209ENST00000564255 OCEL1Q9H607 264 aa5.13□□□□□ -1.59
CHD9-209ENST00000564255 C2orf72A6NCS6 295 aa5.13□□□□□ -1.59
CHD9-209ENST00000564255 PTGER2P43116 358 aa5.13□□□□□ -1.59
CHD9-209ENST00000564255 MINK1Q8N4C8 1332 aaPredicted RBP5.11□□□□□ -1.59
CHD9-209ENST00000564255 OSBPP22059 807 aa5.11□□□□□ -1.59
CHD9-209ENST00000564255 OXER1Q8TDS5 423 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 MAP3K9P80192 1104 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 MAP2K5Q13163 448 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 LHX8Q68G74 356 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 IL27Q8NEV9 243 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 PCDH10Q9P2E7 1040 aa5.1□□□□□ -1.59
CHD9-209ENST00000564255 AMHR2Q16671 573 aa5.09□□□□□ -1.6
CHD9-209ENST00000564255 TMEM92Q6UXU6 159 aa5.09□□□□□ -1.6
CHD9-209ENST00000564255 L3MBTL3Q96JM7 780 aaPredicted RBP5.09□□□□□ -1.6
CHD9-209ENST00000564255 GRXCR2A6NFK2 248 aa5.08□□□□□ -1.6
CHD9-209ENST00000564255 HOMEZQ8IX15 550 aa5.08□□□□□ -1.6
CHD9-209ENST00000564255 IRF6O14896 467 aa5.08□□□□□ -1.6
CHD9-209ENST00000564255 CCDC102AQ96A19 550 aa5.08□□□□□ -1.6
CHD9-209ENST00000564255 G3V3G9 751 aa5.07□□□□□ -1.6
CHD9-209ENST00000564255 PLCG2P16885 1265 aa5.07□□□□□ -1.6
CHD9-209ENST00000564255 GNPATO15228 680 aa5.07□□□□□ -1.6
CHD9-209ENST00000564255 FCHSD2O94868 740 aa5.07□□□□□ -1.6
CHD9-209ENST00000564255 PRIM1P49642 420 aaKnown RBP5.06□□□□□ -1.6
CHD9-209ENST00000564255 PLEKHG3A1L390 1219 aa5.06□□□□□ -1.6
CHD9-209ENST00000564255 NUTM2FA1L443 756 aa5.06□□□□□ -1.6
CHD9-209ENST00000564255 HIC1Q14526 733 aa5.06□□□□□ -1.6
CHD9-209ENST00000564255 FAM117AQ9C073 453 aa5.06□□□□□ -1.6
CHD9-209ENST00000564255 SUPT5HO00267 1087 aaKnown RBP5.05□□□□□ -1.6
CHD9-209ENST00000564255 EVI5O60447 810 aa5.05□□□□□ -1.6
CHD9-209ENST00000564255 UPF1Q92900 1129 aaKnown RBP eCLIP5.05□□□□□ -1.6
CHD9-209ENST00000564255 ZMYND15Q9H091 742 aa5.05□□□□□ -1.6
CHD9-209ENST00000564255 ZNF316A6NFI3 1004 aaPredicted RBP5.04□□□□□ -1.6
CHD9-209ENST00000564255 GABBR2O75899 941 aa5.04□□□□□ -1.6
CHD9-209ENST00000564255 FECHP22830 423 aa5.04□□□□□ -1.6
CHD9-209ENST00000564255 PARP9Q8IXQ6 854 aa5.04□□□□□ -1.6
CHD9-209ENST00000564255 DDRGK1Q96HY6 314 aa5.04□□□□□ -1.6
CHD9-209ENST00000564255 PTGDRQ13258 359 aa5.04□□□□□ -1.6
CHD9-209ENST00000564255 PTCD2Q8WV60 388 aaKnown RBP5.04□□□□□ -1.6
CHD9-209ENST00000564255 ANO8Q9HCE9 1232 aaPredicted RBP5.04□□□□□ -1.6
CHD9-209ENST00000564255 TBC1D12O60347 775 aa5.03□□□□□ -1.6
CHD9-209ENST00000564255 PELP1Q8IZL8 1130 aaKnown RBP5.03□□□□□ -1.6
CHD9-209ENST00000564255 DDX12PQ92771 950 aa5.03□□□□□ -1.6
CHD9-209ENST00000564255 SLC34A2O95436 690 aa5.02□□□□□ -1.61
CHD9-209ENST00000564255 DCBLD2Q96PD2 775 aa5.02□□□□□ -1.61
CHD9-209ENST00000564255 COLQQ9Y215 455 aaPredicted RBP5.02□□□□□ -1.61
CHD9-209ENST00000564255 POTEFA5A3E0 1075 aa5.02□□□□□ -1.61
CHD9-209ENST00000564255 GOPCQ9HD26 462 aa5.02□□□□□ -1.61
CHD9-209ENST00000564255 TMUB1Q9BVT8 246 aa5.02□□□□□ -1.61
CHD9-209ENST00000564255 SLC39A7Q92504 469 aa5.01□□□□□ -1.61
CHD9-209ENST00000564255 PHF14O94880 888 aa5□□□□□ -1.61
CHD9-209ENST00000564255 EPAS1Q99814 870 aa5□□□□□ -1.61
CHD9-209ENST00000564255 SEC24BO95487 1268 aa5□□□□□ -1.61
CHD9-209ENST00000564255 EN1Q05925 392 aaPredicted RBP5□□□□□ -1.61
CHD9-209ENST00000564255 RSPH6AQ9H0K4 717 aa5□□□□□ -1.61
CHD9-209ENST00000564255 NPDC1Q9NQX5 325 aaPredicted RBP5□□□□□ -1.61
CHD9-209ENST00000564255 MS4A1P11836 297 aa4.98□□□□□ -1.61
CHD9-209ENST00000564255 CDHR5Q9HBB8 845 aa4.98□□□□□ -1.61
CHD9-209ENST00000564255 ONECUT3O60422 494 aaPredicted RBP4.98□□□□□ -1.61
CHD9-209ENST00000564255 C7P10643 843 aa4.98□□□□□ -1.61
CHD9-209ENST00000564255 GIGYF2Q6Y7W6 1299 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms