RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
SMG1-209ENST00000563836 G3V3G9 751 aa14.87□□□□□ -0.03
SMG1-209ENST00000563836 MAMSTRQ6ZN01 415 aa14.82□□□□□ -0.04
SMG1-209ENST00000563836 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
SMG1-209ENST00000563836 C3orf67Q6ZVT6 689 aa14.78□□□□□ -0.04
SMG1-209ENST00000563836 SCUBE2Q9NQ36 999 aa14.78□□□□□ -0.04
SMG1-209ENST00000563836 OTUD5Q96G74 571 aa14.76□□□□□ -0.05
SMG1-209ENST00000563836 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.76□□□□□ -0.05
SMG1-209ENST00000563836 TMEM92Q6UXU6 159 aa14.7□□□□□ -0.06
SMG1-209ENST00000563836 CADPS2Q86UW7 1296 aa14.68□□□□□ -0.06
SMG1-209ENST00000563836 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
SMG1-209ENST00000563836 KIF3CO14782 793 aa14.65□□□□□ -0.06
SMG1-209ENST00000563836 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
SMG1-209ENST00000563836 CRISPLD2Q9H0B8 497 aa14.64□□□□□ -0.07
SMG1-209ENST00000563836 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
SMG1-209ENST00000563836 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
SMG1-209ENST00000563836 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
SMG1-209ENST00000563836 C2orf72A6NCS6 295 aa14.61□□□□□ -0.07
SMG1-209ENST00000563836 TMC2Q8TDI7 906 aa14.61□□□□□ -0.07
SMG1-209ENST00000563836 GPHNQ9NQX3 736 aaPredicted RBP14.61□□□□□ -0.07
SMG1-209ENST00000563836 PDE4AP27815 886 aa14.6□□□□□ -0.07
SMG1-209ENST00000563836 FOXK1P85037 733 aa14.54□□□□□ -0.08
SMG1-209ENST00000563836 MFSD10Q14728 455 aa14.54□□□□□ -0.08
SMG1-209ENST00000563836 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
SMG1-209ENST00000563836 DSG2Q14126 1118 aa14.51□□□□□ -0.09
SMG1-209ENST00000563836 DDX27Q96GQ7 796 aaKnown RBP14.5□□□□□ -0.09
SMG1-209ENST00000563836 PPP1R15BQ5SWA1 713 aa14.48□□□□□ -0.09
SMG1-209ENST00000563836 PLPP6Q8IY26 295 aa14.46□□□□□ -0.09
SMG1-209ENST00000563836 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
SMG1-209ENST00000563836 SNPHO15079 494 aa14.43□□□□□ -0.1
SMG1-209ENST00000563836 HOXB3P14651 431 aaPredicted RBP14.42□□□□□ -0.1
SMG1-209ENST00000563836 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
SMG1-209ENST00000563836 WDR70Q9NW82 654 aa14.41□□□□□ -0.1
SMG1-209ENST00000563836 SLC34A2O95436 690 aa14.39□□□□□ -0.11
SMG1-209ENST00000563836 DOK7Q18PE1 504 aa14.39□□□□□ -0.11
SMG1-209ENST00000563836 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
SMG1-209ENST00000563836 CAMK2BQ13554 666 aa14.37□□□□□ -0.11
SMG1-209ENST00000563836 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
SMG1-209ENST00000563836 E2F4Q16254 413 aa14.33□□□□□ -0.12
SMG1-209ENST00000563836 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
SMG1-209ENST00000563836 PTCD2Q8WV60 388 aaKnown RBP14.32□□□□□ -0.12
SMG1-209ENST00000563836 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
SMG1-209ENST00000563836 RIMBP2O15034 1052 aa14.31□□□□□ -0.12
SMG1-209ENST00000563836 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
SMG1-209ENST00000563836 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
SMG1-209ENST00000563836 OXER1Q8TDS5 423 aa14.29□□□□□ -0.12
SMG1-209ENST00000563836 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
SMG1-209ENST00000563836 GPR153Q6NV75 609 aa14.27□□□□□ -0.13
SMG1-209ENST00000563836 ST18O60284 1047 aa14.26□□□□□ -0.13
SMG1-209ENST00000563836 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
SMG1-209ENST00000563836 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
SMG1-209ENST00000563836 LCE2DQ5TA82 110 aaPredicted RBP14.24□□□□□ -0.13
SMG1-209ENST00000563836 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMG1-209ENST00000563836 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
SMG1-209ENST00000563836 TBC1D12O60347 775 aa14.23□□□□□ -0.13
SMG1-209ENST00000563836 HOXB1P14653 301 aaPredicted RBP14.23□□□□□ -0.13
SMG1-209ENST00000563836 KCNV2Q8TDN2 545 aa14.23□□□□□ -0.13
SMG1-209ENST00000563836 ARSIQ5FYB1 569 aa14.22□□□□□ -0.13
SMG1-209ENST00000563836 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
SMG1-209ENST00000563836 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
SMG1-209ENST00000563836 DPYSL4O14531 572 aa14.18□□□□□ -0.14
SMG1-209ENST00000563836 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
SMG1-209ENST00000563836 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMG1-209ENST00000563836 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
SMG1-209ENST00000563836 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
SMG1-209ENST00000563836 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
SMG1-209ENST00000563836 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
SMG1-209ENST00000563836 NUDT7P0C024 238 aa14.15□□□□□ -0.14
SMG1-209ENST00000563836 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
SMG1-209ENST00000563836 EVI5O60447 810 aa14.11□□□□□ -0.15
SMG1-209ENST00000563836 PDIA6Q15084 440 aa14.11□□□□□ -0.15
SMG1-209ENST00000563836 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
SMG1-209ENST00000563836 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
SMG1-209ENST00000563836 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.16
SMG1-209ENST00000563836 EMP3P54852 163 aa14.07□□□□□ -0.16
SMG1-209ENST00000563836 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
SMG1-209ENST00000563836 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
SMG1-209ENST00000563836 WIZO95785 1651 aa14.05□□□□□ -0.16
SMG1-209ENST00000563836 LHX6Q9UPM6 363 aa14.05□□□□□ -0.16
SMG1-209ENST00000563836 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
SMG1-209ENST00000563836 ERBB3P21860 1342 aa14.01□□□□□ -0.17
SMG1-209ENST00000563836 PTGER2P43116 358 aa14.01□□□□□ -0.17
SMG1-209ENST00000563836 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
SMG1-209ENST00000563836 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
SMG1-209ENST00000563836 PEG3Q9GZU2 1588 aa13.98□□□□□ -0.17
SMG1-209ENST00000563836 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
SMG1-209ENST00000563836 POTEMA6NI47 508 aa13.96□□□□□ -0.17
SMG1-209ENST00000563836 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
SMG1-209ENST00000563836 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
SMG1-209ENST00000563836 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
SMG1-209ENST00000563836 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
SMG1-209ENST00000563836 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
SMG1-209ENST00000563836 FOSBP53539 338 aa13.95□□□□□ -0.18
SMG1-209ENST00000563836 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
SMG1-209ENST00000563836 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
SMG1-209ENST00000563836 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
SMG1-209ENST00000563836 SEMA3EO15041 775 aa13.93□□□□□ -0.18
SMG1-209ENST00000563836 PHF14O94880 888 aa13.93□□□□□ -0.18
SMG1-209ENST00000563836 ZNF454Q8N9F8 522 aa13.92□□□□□ -0.18
SMG1-209ENST00000563836 DDX12PQ92771 950 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms