RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
PTPN9-203ENST00000563835 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
PTPN9-203ENST00000563835 BCORL1Q5H9F3 1711 aa14.96□□□□□ -0.01
PTPN9-203ENST00000563835 POGZQ7Z3K3 1410 aa14.96□□□□□ -0.01
PTPN9-203ENST00000563835 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
PTPN9-203ENST00000563835 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
PTPN9-203ENST00000563835 ZFYVE16Q7Z3T8 1539 aa14.95□□□□□ -0.02
PTPN9-203ENST00000563835 YEATS2Q9ULM3 1422 aa14.94□□□□□ -0.02
PTPN9-203ENST00000563835 ITSN2Q9NZM3 1697 aa14.93□□□□□ -0.02
PTPN9-203ENST00000563835 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
PTPN9-203ENST00000563835 ABCC1P33527 1531 aa14.92□□□□□ -0.02
PTPN9-203ENST00000563835 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
PTPN9-203ENST00000563835 KDM5CP41229 1560 aa14.9□□□□□ -0.02
PTPN9-203ENST00000563835 SAMD9LQ8IVG5 1584 aa14.9□□□□□ -0.02
PTPN9-203ENST00000563835 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
PTPN9-203ENST00000563835 HECW2Q9P2P5 1572 aa14.89□□□□□ -0.03
PTPN9-203ENST00000563835 ARHGEF12Q9NZN5 1544 aa14.88□□□□□ -0.03
PTPN9-203ENST00000563835 RIMS1Q86UR5 1692 aaKnown RBP14.88□□□□□ -0.03
PTPN9-203ENST00000563835 ZNF518AQ6AHZ1 1483 aa14.88□□□□□ -0.03
PTPN9-203ENST00000563835 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
PTPN9-203ENST00000563835 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
PTPN9-203ENST00000563835 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
PTPN9-203ENST00000563835 MAGI2Q86UL8 1455 aa14.87□□□□□ -0.03
PTPN9-203ENST00000563835 TIAM1Q13009 1591 aa14.86□□□□□ -0.03
PTPN9-203ENST00000563835 DIP2CQ9Y2E4 1556 aa14.86□□□□□ -0.03
PTPN9-203ENST00000563835 SYCP2Q9BX26 1530 aa14.85□□□□□ -0.03
PTPN9-203ENST00000563835 PTPRMP28827 1452 aa14.84□□□□□ -0.03
PTPN9-203ENST00000563835 FER1L4A9Z1Z3 1794 aa14.84□□□□□ -0.03
PTPN9-203ENST00000563835 GPATCH8Q9UKJ3 1502 aaKnown RBP14.84□□□□□ -0.03
PTPN9-203ENST00000563835 ARID4BQ4LE39 1312 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-203ENST00000563835 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.03
PTPN9-203ENST00000563835 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
PTPN9-203ENST00000563835 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
PTPN9-203ENST00000563835 C9orf84Q5VXU9 1444 aa14.82□□□□□ -0.04
PTPN9-203ENST00000563835 AFAP1Q8N556 730 aa14.81□□□□□ -0.04
PTPN9-203ENST00000563835 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
PTPN9-203ENST00000563835 ATP10AO60312 1499 aa14.8□□□□□ -0.04
PTPN9-203ENST00000563835 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
PTPN9-203ENST00000563835 REREQ9P2R6 1566 aa14.78□□□□□ -0.04
PTPN9-203ENST00000563835 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
PTPN9-203ENST00000563835 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
PTPN9-203ENST00000563835 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.04
PTPN9-203ENST00000563835 ZNF777Q9ULD5 760 aaPredicted RBP14.77□□□□□ -0.05
PTPN9-203ENST00000563835 NCOA2Q15596 1464 aa14.76□□□□□ -0.05
PTPN9-203ENST00000563835 MLECQ14165 292 aa14.75□□□□□ -0.05
PTPN9-203ENST00000563835 ATP7AQ04656 1500 aa14.74□□□□□ -0.05
PTPN9-203ENST00000563835 MYT1LQ9UL68 1186 aa14.73□□□□□ -0.05
PTPN9-203ENST00000563835 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
PTPN9-203ENST00000563835 PLEKHH2Q8IVE3 1493 aa14.72□□□□□ -0.05
PTPN9-203ENST00000563835 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-203ENST00000563835 ZNF644Q9H582 1327 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-203ENST00000563835 HNRNPMP52272 730 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTPN9-203ENST00000563835 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.05
PTPN9-203ENST00000563835 CAMSAP2Q08AD1 1489 aa14.7□□□□□ -0.06
PTPN9-203ENST00000563835 LMTK3Q96Q04 1460 aa14.7□□□□□ -0.06
PTPN9-203ENST00000563835 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
PTPN9-203ENST00000563835 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
PTPN9-203ENST00000563835 AGLP35573 1532 aa14.7□□□□□ -0.06
PTPN9-203ENST00000563835 PLXNC1O60486 1568 aa14.69□□□□□ -0.06
PTPN9-203ENST00000563835 MBD5Q9P267 1494 aa14.69□□□□□ -0.06
PTPN9-203ENST00000563835 C3P01024 1663 aa14.68□□□□□ -0.06
PTPN9-203ENST00000563835 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
PTPN9-203ENST00000563835 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
PTPN9-203ENST00000563835 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
PTPN9-203ENST00000563835 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
PTPN9-203ENST00000563835 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
PTPN9-203ENST00000563835 A2MP01023 1474 aa14.63□□□□□ -0.07
PTPN9-203ENST00000563835 CLTCQ00610 1675 aaKnown RBP14.63□□□□□ -0.07
PTPN9-203ENST00000563835 ARHGEF5Q12774 1597 aa14.63□□□□□ -0.07
PTPN9-203ENST00000563835 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
PTPN9-203ENST00000563835 CEBPAP49715 358 aaPredicted RBP14.61□□□□□ -0.07
PTPN9-203ENST00000563835 MYOM3Q5VTT5 1437 aa14.59□□□□□ -0.07
PTPN9-203ENST00000563835 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
PTPN9-203ENST00000563835 RTEL1-TNFRSF6BF6WH68 1400 aa14.58□□□□□ -0.08
PTPN9-203ENST00000563835 MAST1Q9Y2H9 1570 aa14.57□□□□□ -0.08
PTPN9-203ENST00000563835 HSPA2P54652 639 aa14.57□□□□□ -0.08
PTPN9-203ENST00000563835 PTPN23Q9H3S7 1636 aa14.56□□□□□ -0.08
PTPN9-203ENST00000563835 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
PTPN9-203ENST00000563835 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
PTPN9-203ENST00000563835 MYO3AQ8NEV4 1616 aa14.53□□□□□ -0.08
PTPN9-203ENST00000563835 STRCQ7RTU9 1775 aa14.52□□□□□ -0.08
PTPN9-203ENST00000563835 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
PTPN9-203ENST00000563835 DHX29Q7Z478 1369 aaKnown RBP14.51□□□□□ -0.09
PTPN9-203ENST00000563835 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
PTPN9-203ENST00000563835 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
PTPN9-203ENST00000563835 ZNF142P52746 1687 aaPredicted RBP14.5□□□□□ -0.09
PTPN9-203ENST00000563835 GGT6Q6P531 493 aa14.5□□□□□ -0.09
PTPN9-203ENST00000563835 RNF17Q9BXT8 1623 aaKnown RBP14.5□□□□□ -0.09
PTPN9-203ENST00000563835 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
PTPN9-203ENST00000563835 FGD6Q6ZV73 1430 aa14.49□□□□□ -0.09
PTPN9-203ENST00000563835 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
PTPN9-203ENST00000563835 APLP2Q06481 763 aa14.49□□□□□ -0.09
PTPN9-203ENST00000563835 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
PTPN9-203ENST00000563835 TCOF1Q13428 1488 aaKnown RBP14.49□□□□□ -0.09
PTPN9-203ENST00000563835 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
PTPN9-203ENST00000563835 ZMYM3Q14202 1370 aa14.47□□□□□ -0.09
PTPN9-203ENST00000563835 CEP152O94986 1710 aa14.47□□□□□ -0.09
PTPN9-203ENST00000563835 SHANK2Q9UPX8 1470 aa14.47□□□□□ -0.09
PTPN9-203ENST00000563835 NPATQ14207 1427 aa14.47□□□□□ -0.09
PTPN9-203ENST00000563835 RSPH4AQ5TD94 716 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms