RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
VAC14-204ENST00000563662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAC14-204ENST00000563662 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
VAC14-204ENST00000563662 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
VAC14-204ENST00000563662 ARID4BQ4LE39 1312 aaPredicted RBP16.1■□□□□ 0.17
VAC14-204ENST00000563662 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
VAC14-204ENST00000563662 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
VAC14-204ENST00000563662 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
VAC14-204ENST00000563662 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
VAC14-204ENST00000563662 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
VAC14-204ENST00000563662 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.15
VAC14-204ENST00000563662 KIF14Q15058 1648 aa16.01■□□□□ 0.15
VAC14-204ENST00000563662 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
VAC14-204ENST00000563662 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
VAC14-204ENST00000563662 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
VAC14-204ENST00000563662 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
VAC14-204ENST00000563662 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
VAC14-204ENST00000563662 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
VAC14-204ENST00000563662 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
VAC14-204ENST00000563662 ZNF518AQ6AHZ1 1483 aa15.96■□□□□ 0.14
VAC14-204ENST00000563662 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
VAC14-204ENST00000563662 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
VAC14-204ENST00000563662 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
VAC14-204ENST00000563662 ATP10AO60312 1499 aa15.94■□□□□ 0.14
VAC14-204ENST00000563662 ZMYM4Q5VZL5 1548 aa15.94■□□□□ 0.14
VAC14-204ENST00000563662 FRMPD1Q5SYB0 1578 aa15.93■□□□□ 0.14
VAC14-204ENST00000563662 ZFYVE16Q7Z3T8 1539 aa15.93■□□□□ 0.14
VAC14-204ENST00000563662 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
VAC14-204ENST00000563662 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
VAC14-204ENST00000563662 ARHGEF40Q8TER5 1519 aa15.9■□□□□ 0.14
VAC14-204ENST00000563662 MLECQ14165 292 aa15.9■□□□□ 0.14
VAC14-204ENST00000563662 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
VAC14-204ENST00000563662 PTPRMP28827 1452 aa15.89■□□□□ 0.13
VAC14-204ENST00000563662 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
VAC14-204ENST00000563662 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
VAC14-204ENST00000563662 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.13
VAC14-204ENST00000563662 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
VAC14-204ENST00000563662 PLEKHH2Q8IVE3 1493 aa15.88■□□□□ 0.13
VAC14-204ENST00000563662 MLH3Q9UHC1 1453 aa15.88■□□□□ 0.13
VAC14-204ENST00000563662 SPAG9O60271 1321 aaKnown RBP15.88■□□□□ 0.13
VAC14-204ENST00000563662 RICTORQ6R327 1708 aa15.88■□□□□ 0.13
VAC14-204ENST00000563662 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
VAC14-204ENST00000563662 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
VAC14-204ENST00000563662 APLP2Q06481 763 aa15.86■□□□□ 0.13
VAC14-204ENST00000563662 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
VAC14-204ENST00000563662 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
VAC14-204ENST00000563662 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.12
VAC14-204ENST00000563662 KDM5CP41229 1560 aa15.82■□□□□ 0.12
VAC14-204ENST00000563662 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
VAC14-204ENST00000563662 ARHGEF12Q9NZN5 1544 aa15.81■□□□□ 0.12
VAC14-204ENST00000563662 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
VAC14-204ENST00000563662 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
VAC14-204ENST00000563662 PREX2Q70Z35 1606 aa15.8■□□□□ 0.12
VAC14-204ENST00000563662 ABCC1P33527 1531 aa15.8■□□□□ 0.12
VAC14-204ENST00000563662 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
VAC14-204ENST00000563662 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
VAC14-204ENST00000563662 TSPY4P0CV99 314 aa15.78■□□□□ 0.12
VAC14-204ENST00000563662 TSPY10P0CW01 314 aa15.78■□□□□ 0.12
VAC14-204ENST00000563662 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
VAC14-204ENST00000563662 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
VAC14-204ENST00000563662 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
VAC14-204ENST00000563662 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
VAC14-204ENST00000563662 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
VAC14-204ENST00000563662 AGLP35573 1532 aa15.74■□□□□ 0.11
VAC14-204ENST00000563662 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
VAC14-204ENST00000563662 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
VAC14-204ENST00000563662 RTEL1-TNFRSF6BF6WH68 1400 aa15.73■□□□□ 0.11
VAC14-204ENST00000563662 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
VAC14-204ENST00000563662 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
VAC14-204ENST00000563662 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
VAC14-204ENST00000563662 SAMD9LQ8IVG5 1584 aa15.72■□□□□ 0.11
VAC14-204ENST00000563662 CEBPAP49715 358 aaPredicted RBP15.72■□□□□ 0.11
VAC14-204ENST00000563662 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
VAC14-204ENST00000563662 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
VAC14-204ENST00000563662 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.1
VAC14-204ENST00000563662 MBD5Q9P267 1494 aa15.71■□□□□ 0.1
VAC14-204ENST00000563662 GGT6Q6P531 493 aa15.7■□□□□ 0.1
VAC14-204ENST00000563662 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
VAC14-204ENST00000563662 A2MP01023 1474 aa15.69■□□□□ 0.1
VAC14-204ENST00000563662 ITSN2Q9NZM3 1697 aa15.68■□□□□ 0.1
VAC14-204ENST00000563662 DHX29Q7Z478 1369 aaKnown RBP15.68■□□□□ 0.1
VAC14-204ENST00000563662 HSPA2P54652 639 aa15.67■□□□□ 0.1
VAC14-204ENST00000563662 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
VAC14-204ENST00000563662 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
VAC14-204ENST00000563662 LMTK3Q96Q04 1460 aa15.66■□□□□ 0.1
VAC14-204ENST00000563662 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
VAC14-204ENST00000563662 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
VAC14-204ENST00000563662 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
VAC14-204ENST00000563662 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
VAC14-204ENST00000563662 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
VAC14-204ENST00000563662 KIF3BO15066 747 aa15.64■□□□□ 0.09
VAC14-204ENST00000563662 UHRF1BP1Q6BDS2 1440 aa15.64■□□□□ 0.09
VAC14-204ENST00000563662 KIDINS220Q9ULH0 1771 aa15.63■□□□□ 0.09
VAC14-204ENST00000563662 CAMSAP2Q08AD1 1489 aa15.63■□□□□ 0.09
VAC14-204ENST00000563662 MYOM3Q5VTT5 1437 aa15.62■□□□□ 0.09
VAC14-204ENST00000563662 SIGLEC1Q9BZZ2 1709 aa15.61■□□□□ 0.09
VAC14-204ENST00000563662 NPATQ14207 1427 aa15.6■□□□□ 0.09
VAC14-204ENST00000563662 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
VAC14-204ENST00000563662 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
VAC14-204ENST00000563662 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms