RNA–Protein interactions for RNA: ENST00000563557.1

AC009097.3-201, humanhuman

BASIC

Gene AC009097.3, Length 1,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009097.3-201ENST00000563557 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
AC009097.3-201ENST00000563557 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
AC009097.3-201ENST00000563557 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
AC009097.3-201ENST00000563557 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
AC009097.3-201ENST00000563557 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
AC009097.3-201ENST00000563557 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
AC009097.3-201ENST00000563557 KIF3CO14782 793 aa12.3□□□□□ -0.44
AC009097.3-201ENST00000563557 SNPHO15079 494 aa12.3□□□□□ -0.44
AC009097.3-201ENST00000563557 PDE4AP27815 886 aa12.28□□□□□ -0.44
AC009097.3-201ENST00000563557 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
AC009097.3-201ENST00000563557 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
AC009097.3-201ENST00000563557 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
AC009097.3-201ENST00000563557 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
AC009097.3-201ENST00000563557 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
AC009097.3-201ENST00000563557 NCKAP5LQ9HCH0 1330 aa12.23□□□□□ -0.45
AC009097.3-201ENST00000563557 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
AC009097.3-201ENST00000563557 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
AC009097.3-201ENST00000563557 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
AC009097.3-201ENST00000563557 FOXK1P85037 733 aa12.21□□□□□ -0.45
AC009097.3-201ENST00000563557 DSG2Q14126 1118 aa12.2□□□□□ -0.46
AC009097.3-201ENST00000563557 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
AC009097.3-201ENST00000563557 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
AC009097.3-201ENST00000563557 ST18O60284 1047 aa12.17□□□□□ -0.46
AC009097.3-201ENST00000563557 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
AC009097.3-201ENST00000563557 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
AC009097.3-201ENST00000563557 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
AC009097.3-201ENST00000563557 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
AC009097.3-201ENST00000563557 MFSD10Q14728 455 aa12.14□□□□□ -0.47
AC009097.3-201ENST00000563557 SLC34A2O95436 690 aa12.11□□□□□ -0.47
AC009097.3-201ENST00000563557 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
AC009097.3-201ENST00000563557 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
AC009097.3-201ENST00000563557 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
AC009097.3-201ENST00000563557 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
AC009097.3-201ENST00000563557 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
AC009097.3-201ENST00000563557 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
AC009097.3-201ENST00000563557 GPR153Q6NV75 609 aa12.07□□□□□ -0.48
AC009097.3-201ENST00000563557 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
AC009097.3-201ENST00000563557 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
AC009097.3-201ENST00000563557 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
AC009097.3-201ENST00000563557 TBC1D12O60347 775 aa12.03□□□□□ -0.48
AC009097.3-201ENST00000563557 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
AC009097.3-201ENST00000563557 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
AC009097.3-201ENST00000563557 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC009097.3-201ENST00000563557 CAMK2BQ13554 666 aa12□□□□□ -0.49
AC009097.3-201ENST00000563557 EMP3P54852 163 aa11.99□□□□□ -0.49
AC009097.3-201ENST00000563557 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
AC009097.3-201ENST00000563557 E2F4Q16254 413 aa11.98□□□□□ -0.49
AC009097.3-201ENST00000563557 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
AC009097.3-201ENST00000563557 NUDT7P0C024 238 aa11.96□□□□□ -0.49
AC009097.3-201ENST00000563557 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
AC009097.3-201ENST00000563557 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
AC009097.3-201ENST00000563557 ERBB3P21860 1342 aa11.93□□□□□ -0.5
AC009097.3-201ENST00000563557 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
AC009097.3-201ENST00000563557 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
AC009097.3-201ENST00000563557 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
AC009097.3-201ENST00000563557 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
AC009097.3-201ENST00000563557 EVI5O60447 810 aa11.89□□□□□ -0.51
AC009097.3-201ENST00000563557 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
AC009097.3-201ENST00000563557 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
AC009097.3-201ENST00000563557 DPYSL4O14531 572 aa11.88□□□□□ -0.51
AC009097.3-201ENST00000563557 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
AC009097.3-201ENST00000563557 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
AC009097.3-201ENST00000563557 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
AC009097.3-201ENST00000563557 VARS2Q5ST30 1063 aaKnown RBP11.87□□□□□ -0.51
AC009097.3-201ENST00000563557 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
AC009097.3-201ENST00000563557 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
AC009097.3-201ENST00000563557 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
AC009097.3-201ENST00000563557 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
AC009097.3-201ENST00000563557 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
AC009097.3-201ENST00000563557 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
AC009097.3-201ENST00000563557 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
AC009097.3-201ENST00000563557 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
AC009097.3-201ENST00000563557 PDIA6Q15084 440 aa11.77□□□□□ -0.53
AC009097.3-201ENST00000563557 FOSBP53539 338 aa11.76□□□□□ -0.53
AC009097.3-201ENST00000563557 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
AC009097.3-201ENST00000563557 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
AC009097.3-201ENST00000563557 PTGER2P43116 358 aa11.74□□□□□ -0.53
AC009097.3-201ENST00000563557 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
AC009097.3-201ENST00000563557 DDX12PQ92771 950 aa11.71□□□□□ -0.53
AC009097.3-201ENST00000563557 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
AC009097.3-201ENST00000563557 PHF14O94880 888 aa11.7□□□□□ -0.54
AC009097.3-201ENST00000563557 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
AC009097.3-201ENST00000563557 EPAS1Q99814 870 aa11.68□□□□□ -0.54
AC009097.3-201ENST00000563557 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 PBX2P40425 430 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
AC009097.3-201ENST00000563557 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
AC009097.3-201ENST00000563557 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
AC009097.3-201ENST00000563557 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
AC009097.3-201ENST00000563557 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
AC009097.3-201ENST00000563557 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
AC009097.3-201ENST00000563557 SEMA3EO15041 775 aa11.62□□□□□ -0.55
AC009097.3-201ENST00000563557 PSEN2P49810 448 aa11.62□□□□□ -0.55
AC009097.3-201ENST00000563557 NBR1Q14596 966 aa11.62□□□□□ -0.55
AC009097.3-201ENST00000563557 PTPREP23469 700 aa11.61□□□□□ -0.55
AC009097.3-201ENST00000563557 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms