RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 YEATS2Q9ULM3 1422 aa34.31■■■■□ 3.08
GGA2-205ENST00000563494 SIGLEC1Q9BZZ2 1709 aa34.31■■■■□ 3.08
GGA2-205ENST00000563494 EFCAB2Q5VUJ9 269 aa34.31■■■■□ 3.08
GGA2-205ENST00000563494 CCDC18Q5T9S5 1454 aa34.3■■■■□ 3.08
GGA2-205ENST00000563494 CLIP1P30622 1438 aa34.3■■■■□ 3.08
GGA2-205ENST00000563494 PTPRMP28827 1452 aa34.28■■■■□ 3.08
GGA2-205ENST00000563494 FYCO1Q9BQS8 1478 aa34.27■■■■□ 3.08
GGA2-205ENST00000563494 ZFYVE16Q7Z3T8 1539 aa34.26■■■■□ 3.08
GGA2-205ENST00000563494 CDC42BPBQ9Y5S2 1711 aa34.25■■■■□ 3.07
GGA2-205ENST00000563494 MADDQ8WXG6 1647 aa34.22■■■■□ 3.07
GGA2-205ENST00000563494 ARHGAP5Q13017 1502 aa34.19■■■■□ 3.06
GGA2-205ENST00000563494 ARID4BQ4LE39 1312 aaPredicted RBP34.18■■■■□ 3.06
GGA2-205ENST00000563494 PREX2Q70Z35 1606 aa34.16■■■■□ 3.06
GGA2-205ENST00000563494 KDM5CP41229 1560 aa34.16■■■■□ 3.06
GGA2-205ENST00000563494 ZNF518AQ6AHZ1 1483 aa34.14■■■■□ 3.06
GGA2-205ENST00000563494 ATP10AO60312 1499 aa34.13■■■■□ 3.05
GGA2-205ENST00000563494 AFAP1Q8N556 730 aa34.12■■■■□ 3.05
GGA2-205ENST00000563494 ARHGEF12Q9NZN5 1544 aa34.11■■■■□ 3.05
GGA2-205ENST00000563494 CDC42BPAQ5VT25 1732 aa34.11■■■■□ 3.05
GGA2-205ENST00000563494 RIMS1Q86UR5 1692 aaKnown RBP34.07■■■■□ 3.04
GGA2-205ENST00000563494 ABCC1P33527 1531 aa34.06■■■■□ 3.04
GGA2-205ENST00000563494 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
GGA2-205ENST00000563494 TRAPPC8Q9Y2L5 1435 aa34.04■■■■□ 3.04
GGA2-205ENST00000563494 MLH3Q9UHC1 1453 aa34.03■■■■□ 3.04
GGA2-205ENST00000563494 GPATCH8Q9UKJ3 1502 aaKnown RBP34.01■■■■□ 3.04
GGA2-205ENST00000563494 ITSN2Q9NZM3 1697 aa34■■■■□ 3.03
GGA2-205ENST00000563494 DIP2CQ9Y2E4 1556 aa33.98■■■■□ 3.03
GGA2-205ENST00000563494 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
GGA2-205ENST00000563494 CEP162Q5TB80 1403 aa33.97■■■■□ 3.03
GGA2-205ENST00000563494 LMTK3Q96Q04 1460 aa33.96■■■■□ 3.03
GGA2-205ENST00000563494 SAMD9LQ8IVG5 1584 aa33.94■■■■□ 3.02
GGA2-205ENST00000563494 ABCA6Q8N139 1617 aa33.94■■■■□ 3.02
GGA2-205ENST00000563494 FER1L4A9Z1Z3 1794 aa33.93■■■■□ 3.02
GGA2-205ENST00000563494 KIDINS220Q9ULH0 1771 aa33.91■■■■□ 3.02
GGA2-205ENST00000563494 MLECQ14165 292 aa33.91■■■■□ 3.02
GGA2-205ENST00000563494 AGLP35573 1532 aa33.85■■■■□ 3.01
GGA2-205ENST00000563494 KIAA1107Q9UPP5 1409 aa33.84■■■■□ 3.01
GGA2-205ENST00000563494 MTUS2Q5JR59 1369 aa33.84■■■■□ 3.01
GGA2-205ENST00000563494 SYCP2Q9BX26 1530 aa33.82■■■■□ 3
GGA2-205ENST00000563494 LOC105371045A0A1W2PR82 267 aa33.8■■■■□ 3
GGA2-205ENST00000563494 HNRNPMP52272 730 aaKnown RBP eCLIP33.79■■■■□ 3
GGA2-205ENST00000563494 ILDR1Q86SU0 546 aaPredicted RBP33.79■■■■□ 3
GGA2-205ENST00000563494 ZNF777Q9ULD5 760 aaPredicted RBP33.79■■■■□ 3
GGA2-205ENST00000563494 CCNB3Q8WWL7 1395 aa33.79■■■■□ 3
GGA2-205ENST00000563494 EHBP1L1Q8N3D4 1523 aa33.79■■■■□ 3
GGA2-205ENST00000563494 TIAM1Q13009 1591 aa33.78■■■■□ 3
GGA2-205ENST00000563494 CFDP1Q9UEE9 299 aaPredicted RBP33.78■■■■□ 3
GGA2-205ENST00000563494 PLEKHH2Q8IVE3 1493 aa33.75■■■□□ 2.99
GGA2-205ENST00000563494 MYT1LQ9UL68 1186 aa33.74■■■□□ 2.99
GGA2-205ENST00000563494 CEBPAP49715 358 aaPredicted RBP33.73■■■□□ 2.99
GGA2-205ENST00000563494 INO80Q9ULG1 1556 aaPredicted RBP33.7■■■□□ 2.99
GGA2-205ENST00000563494 HSPA2P54652 639 aa33.7■■■□□ 2.99
GGA2-205ENST00000563494 PLPPR3Q6T4P5 718 aa33.7■■■□□ 2.99
GGA2-205ENST00000563494 MBD5Q9P267 1494 aa33.69■■■□□ 2.98
GGA2-205ENST00000563494 ZNF644Q9H582 1327 aaPredicted RBP33.69■■■□□ 2.98
GGA2-205ENST00000563494 SPAG9O60271 1321 aaKnown RBP33.68■■■□□ 2.98
GGA2-205ENST00000563494 ATP7AQ04656 1500 aa33.67■■■□□ 2.98
GGA2-205ENST00000563494 PREX1Q8TCU6 1659 aa33.64■■■□□ 2.98
GGA2-205ENST00000563494 PLXNC1O60486 1568 aa33.64■■■□□ 2.98
GGA2-205ENST00000563494 VPS8Q8N3P4 1428 aa33.63■■■□□ 2.97
GGA2-205ENST00000563494 C3P01024 1663 aa33.63■■■□□ 2.97
GGA2-205ENST00000563494 NCOA2Q15596 1464 aa33.62■■■□□ 2.97
GGA2-205ENST00000563494 SETD1BQ9UPS6 1966 aaKnown RBP33.61■■■□□ 2.97
GGA2-205ENST00000563494 SUPT6HQ7KZ85 1726 aaKnown RBP33.59■■■□□ 2.97
GGA2-205ENST00000563494 A2MP01023 1474 aa33.56■■■□□ 2.96
GGA2-205ENST00000563494 RTEL1-TNFRSF6BF6WH68 1400 aa33.53■■■□□ 2.96
GGA2-205ENST00000563494 CNTLNQ9NXG0 1405 aa33.53■■■□□ 2.96
GGA2-205ENST00000563494 LRRC9Q6ZRR7 1453 aa33.53■■■□□ 2.96
GGA2-205ENST00000563494 MAP3K1Q13233 1512 aa33.52■■■□□ 2.96
GGA2-205ENST00000563494 MROH2AA6NES4 1674 aa33.5■■■□□ 2.95
GGA2-205ENST00000563494 ADGBQ8N7X0 1667 aa33.5■■■□□ 2.95
GGA2-205ENST00000563494 CAMSAP2Q08AD1 1489 aa33.47■■■□□ 2.95
GGA2-205ENST00000563494 STRCQ7RTU9 1775 aa33.47■■■□□ 2.95
GGA2-205ENST00000563494 UHRF1BP1Q6BDS2 1440 aa33.46■■■□□ 2.95
GGA2-205ENST00000563494 KANK4Q5T7N3 995 aaPredicted RBP33.46■■■□□ 2.95
GGA2-205ENST00000563494 ZMYM3Q14202 1370 aa33.44■■■□□ 2.94
GGA2-205ENST00000563494 ESF1Q9H501 851 aaKnown RBP33.43■■■□□ 2.94
GGA2-205ENST00000563494 RSPH4AQ5TD94 716 aa33.42■■■□□ 2.94
GGA2-205ENST00000563494 CCDC141Q6ZP82 1450 aa33.42■■■□□ 2.94
GGA2-205ENST00000563494 NPATQ14207 1427 aa33.4■■■□□ 2.94
GGA2-205ENST00000563494 DHX29Q7Z478 1369 aaKnown RBP33.4■■■□□ 2.94
GGA2-205ENST00000563494 FBXO41Q8TF61 875 aa33.4■■■□□ 2.94
GGA2-205ENST00000563494 ARHGEF5Q12774 1597 aa33.39■■■□□ 2.94
GGA2-205ENST00000563494 CLTCQ00610 1675 aaKnown RBP33.39■■■□□ 2.94
GGA2-205ENST00000563494 PPP6R1Q9UPN7 881 aa33.38■■■□□ 2.93
GGA2-205ENST00000563494 GGT6Q6P531 493 aa33.33■■■□□ 2.93
GGA2-205ENST00000563494 PTPRKQ15262 1439 aa33.31■■■□□ 2.92
GGA2-205ENST00000563494 MIA2Q96PC5 1412 aa33.28■■■□□ 2.92
GGA2-205ENST00000563494 MYOM3Q5VTT5 1437 aa33.26■■■□□ 2.91
GGA2-205ENST00000563494 DMRT2Q9Y5R5 561 aa33.25■■■□□ 2.91
GGA2-205ENST00000563494 MAST1Q9Y2H9 1570 aa33.25■■■□□ 2.91
GGA2-205ENST00000563494 PTPRTO14522 1441 aa33.23■■■□□ 2.91
GGA2-205ENST00000563494 NCOA1Q15788 1441 aa33.22■■■□□ 2.91
GGA2-205ENST00000563494 KIF3BO15066 747 aa33.21■■■□□ 2.91
GGA2-205ENST00000563494 CERKQ8TCT0 537 aa33.21■■■□□ 2.91
GGA2-205ENST00000563494 TSPY4P0CV99 314 aa33.2■■■□□ 2.91
GGA2-205ENST00000563494 TSPY10P0CW01 314 aa33.2■■■□□ 2.91
GGA2-205ENST00000563494 ZNF142P52746 1687 aaPredicted RBP33.2■■■□□ 2.9
GGA2-205ENST00000563494 FAM135AQ9P2D6 1515 aa33.18■■■□□ 2.9
GGA2-205ENST00000563494 MYO3AQ8NEV4 1616 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms