RNA–Protein interactions for RNA: ENST00000563115.5

POLR2C-204, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-204ENST00000563115 ZFYVE16Q7Z3T8 1539 aa28.86■■■□□ 2.21
POLR2C-204ENST00000563115 PTPRMP28827 1452 aa28.85■■■□□ 2.21
POLR2C-204ENST00000563115 ARID4BQ4LE39 1312 aaPredicted RBP28.85■■■□□ 2.21
POLR2C-204ENST00000563115 YEATS2Q9ULM3 1422 aa28.85■■■□□ 2.21
POLR2C-204ENST00000563115 CCDC18Q5T9S5 1454 aa28.85■■■□□ 2.21
POLR2C-204ENST00000563115 MAGI2Q86UL8 1455 aa28.84■■■□□ 2.21
POLR2C-204ENST00000563115 MADDQ8WXG6 1647 aa28.83■■■□□ 2.21
POLR2C-204ENST00000563115 EFCAB2Q5VUJ9 269 aa28.83■■■□□ 2.21
POLR2C-204ENST00000563115 SIGLEC1Q9BZZ2 1709 aa28.81■■■□□ 2.2
POLR2C-204ENST00000563115 FYCO1Q9BQS8 1478 aa28.8■■■□□ 2.2
POLR2C-204ENST00000563115 ARHGAP5Q13017 1502 aa28.79■■■□□ 2.2
POLR2C-204ENST00000563115 CDC42BPBQ9Y5S2 1711 aa28.75■■■□□ 2.19
POLR2C-204ENST00000563115 RIMS1Q86UR5 1692 aaKnown RBP28.73■■■□□ 2.19
POLR2C-204ENST00000563115 PREX2Q70Z35 1606 aa28.72■■■□□ 2.19
POLR2C-204ENST00000563115 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
POLR2C-204ENST00000563115 KDM5CP41229 1560 aa28.71■■■□□ 2.19
POLR2C-204ENST00000563115 ATP10AO60312 1499 aa28.68■■■□□ 2.18
POLR2C-204ENST00000563115 AFAP1Q8N556 730 aa28.66■■■□□ 2.18
POLR2C-204ENST00000563115 C9orf84Q5VXU9 1444 aa28.66■■■□□ 2.18
POLR2C-204ENST00000563115 CDC42BPAQ5VT25 1732 aa28.66■■■□□ 2.18
POLR2C-204ENST00000563115 ABCC1P33527 1531 aa28.65■■■□□ 2.18
POLR2C-204ENST00000563115 ARHGEF12Q9NZN5 1544 aa28.63■■■□□ 2.17
POLR2C-204ENST00000563115 MLECQ14165 292 aa28.6■■■□□ 2.17
POLR2C-204ENST00000563115 ITSN2Q9NZM3 1697 aa28.6■■■□□ 2.17
POLR2C-204ENST00000563115 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
POLR2C-204ENST00000563115 TRAPPC8Q9Y2L5 1435 aa28.59■■■□□ 2.17
POLR2C-204ENST00000563115 DIP2CQ9Y2E4 1556 aa28.58■■■□□ 2.17
POLR2C-204ENST00000563115 LMTK3Q96Q04 1460 aa28.58■■■□□ 2.17
POLR2C-204ENST00000563115 MLH3Q9UHC1 1453 aa28.57■■■□□ 2.16
POLR2C-204ENST00000563115 ABCA6Q8N139 1617 aa28.55■■■□□ 2.16
POLR2C-204ENST00000563115 CEP162Q5TB80 1403 aa28.55■■■□□ 2.16
POLR2C-204ENST00000563115 GPATCH8Q9UKJ3 1502 aaKnown RBP28.54■■■□□ 2.16
POLR2C-204ENST00000563115 SAMD9LQ8IVG5 1584 aa28.53■■■□□ 2.16
POLR2C-204ENST00000563115 REREQ9P2R6 1566 aa28.53■■■□□ 2.16
POLR2C-204ENST00000563115 MYT1LQ9UL68 1186 aa28.51■■■□□ 2.15
POLR2C-204ENST00000563115 PLPPR3Q6T4P5 718 aa28.5■■■□□ 2.15
POLR2C-204ENST00000563115 KIDINS220Q9ULH0 1771 aa28.48■■■□□ 2.15
POLR2C-204ENST00000563115 ILDR1Q86SU0 546 aaPredicted RBP28.48■■■□□ 2.15
POLR2C-204ENST00000563115 MTUS2Q5JR59 1369 aa28.48■■■□□ 2.15
POLR2C-204ENST00000563115 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
POLR2C-204ENST00000563115 SYCP2Q9BX26 1530 aa28.47■■■□□ 2.15
POLR2C-204ENST00000563115 CCNB3Q8WWL7 1395 aa28.44■■■□□ 2.14
POLR2C-204ENST00000563115 AGLP35573 1532 aa28.43■■■□□ 2.14
POLR2C-204ENST00000563115 EHBP1L1Q8N3D4 1523 aa28.42■■■□□ 2.14
POLR2C-204ENST00000563115 CFDP1Q9UEE9 299 aaPredicted RBP28.4■■■□□ 2.14
POLR2C-204ENST00000563115 KIAA1107Q9UPP5 1409 aa28.4■■■□□ 2.14
POLR2C-204ENST00000563115 TIAM1Q13009 1591 aa28.4■■■□□ 2.14
POLR2C-204ENST00000563115 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
POLR2C-204ENST00000563115 HNRNPMP52272 730 aaKnown RBP eCLIP28.38■■■□□ 2.13
POLR2C-204ENST00000563115 HSPA2P54652 639 aa28.38■■■□□ 2.13
POLR2C-204ENST00000563115 CEBPAP49715 358 aaPredicted RBP28.36■■■□□ 2.13
POLR2C-204ENST00000563115 SPAG9O60271 1321 aaKnown RBP28.34■■■□□ 2.13
POLR2C-204ENST00000563115 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
POLR2C-204ENST00000563115 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
POLR2C-204ENST00000563115 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
POLR2C-204ENST00000563115 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
POLR2C-204ENST00000563115 C3P01024 1663 aa28.29■■■□□ 2.12
POLR2C-204ENST00000563115 ZNF644Q9H582 1327 aaPredicted RBP28.28■■■□□ 2.12
POLR2C-204ENST00000563115 PLXNC1O60486 1568 aa28.26■■■□□ 2.11
POLR2C-204ENST00000563115 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
POLR2C-204ENST00000563115 NCOA2Q15596 1464 aa28.25■■■□□ 2.11
POLR2C-204ENST00000563115 VPS8Q8N3P4 1428 aa28.25■■■□□ 2.11
POLR2C-204ENST00000563115 SETD1BQ9UPS6 1966 aaKnown RBP28.24■■■□□ 2.11
POLR2C-204ENST00000563115 SUPT6HQ7KZ85 1726 aaKnown RBP28.24■■■□□ 2.11
POLR2C-204ENST00000563115 A2MP01023 1474 aa28.22■■■□□ 2.11
POLR2C-204ENST00000563115 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
POLR2C-204ENST00000563115 ESF1Q9H501 851 aaKnown RBP28.21■■■□□ 2.11
POLR2C-204ENST00000563115 UHRF1BP1Q6BDS2 1440 aa28.2■■■□□ 2.11
POLR2C-204ENST00000563115 ADGBQ8N7X0 1667 aa28.17■■■□□ 2.1
POLR2C-204ENST00000563115 MROH2AA6NES4 1674 aa28.16■■■□□ 2.1
POLR2C-204ENST00000563115 CAMSAP2Q08AD1 1489 aa28.15■■■□□ 2.1
POLR2C-204ENST00000563115 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
POLR2C-204ENST00000563115 RTEL1-TNFRSF6BF6WH68 1400 aa28.13■■■□□ 2.09
POLR2C-204ENST00000563115 FBXO41Q8TF61 875 aa28.13■■■□□ 2.09
POLR2C-204ENST00000563115 STRCQ7RTU9 1775 aa28.12■■■□□ 2.09
POLR2C-204ENST00000563115 CCDC141Q6ZP82 1450 aa28.11■■■□□ 2.09
POLR2C-204ENST00000563115 CLTCQ00610 1675 aaKnown RBP28.1■■■□□ 2.09
POLR2C-204ENST00000563115 ZMYM3Q14202 1370 aa28.1■■■□□ 2.09
POLR2C-204ENST00000563115 MAP3K1Q13233 1512 aa28.08■■■□□ 2.09
POLR2C-204ENST00000563115 NPATQ14207 1427 aa28.08■■■□□ 2.09
POLR2C-204ENST00000563115 ARHGEF5Q12774 1597 aa28.05■■■□□ 2.08
POLR2C-204ENST00000563115 GGT6Q6P531 493 aa28.05■■■□□ 2.08
POLR2C-204ENST00000563115 DHX29Q7Z478 1369 aaKnown RBP28.04■■■□□ 2.08
POLR2C-204ENST00000563115 KANK4Q5T7N3 995 aaPredicted RBP28.04■■■□□ 2.08
POLR2C-204ENST00000563115 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
POLR2C-204ENST00000563115 PPP6R1Q9UPN7 881 aa27.99■■■□□ 2.07
POLR2C-204ENST00000563115 PTPRKQ15262 1439 aa27.99■■■□□ 2.07
POLR2C-204ENST00000563115 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
POLR2C-204ENST00000563115 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
POLR2C-204ENST00000563115 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
POLR2C-204ENST00000563115 CERKQ8TCT0 537 aa27.95■■■□□ 2.06
POLR2C-204ENST00000563115 PTPRTO14522 1441 aa27.94■■■□□ 2.06
POLR2C-204ENST00000563115 MYOM3Q5VTT5 1437 aa27.94■■■□□ 2.06
POLR2C-204ENST00000563115 KIF3BO15066 747 aa27.93■■■□□ 2.06
POLR2C-204ENST00000563115 ZNF142P52746 1687 aaPredicted RBP27.93■■■□□ 2.06
POLR2C-204ENST00000563115 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
POLR2C-204ENST00000563115 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
POLR2C-204ENST00000563115 MAST1Q9Y2H9 1570 aa27.91■■■□□ 2.06
POLR2C-204ENST00000563115 TSPY4P0CV99 314 aa27.91■■■□□ 2.06
POLR2C-204ENST00000563115 TSPY10P0CW01 314 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms