RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
CHD9-206ENST00000562791 C2orf72A6NCS6 295 aa12.94□□□□□ -0.34
CHD9-206ENST00000562791 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
CHD9-206ENST00000562791 RYDENQ9NUL5 291 aaKnown RBP12.9□□□□□ -0.34
CHD9-206ENST00000562791 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
CHD9-206ENST00000562791 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
CHD9-206ENST00000562791 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CHD9-206ENST00000562791 EMP3P54852 163 aa12.83□□□□□ -0.36
CHD9-206ENST00000562791 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
CHD9-206ENST00000562791 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
CHD9-206ENST00000562791 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
CHD9-206ENST00000562791 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
CHD9-206ENST00000562791 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
CHD9-206ENST00000562791 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
CHD9-206ENST00000562791 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
CHD9-206ENST00000562791 DSG2Q14126 1118 aa12.77□□□□□ -0.37
CHD9-206ENST00000562791 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
CHD9-206ENST00000562791 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHD9-206ENST00000562791 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
CHD9-206ENST00000562791 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
CHD9-206ENST00000562791 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
CHD9-206ENST00000562791 FOXK1P85037 733 aa12.76□□□□□ -0.37
CHD9-206ENST00000562791 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
CHD9-206ENST00000562791 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
CHD9-206ENST00000562791 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
CHD9-206ENST00000562791 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
CHD9-206ENST00000562791 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
CHD9-206ENST00000562791 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
CHD9-206ENST00000562791 SLC34A2O95436 690 aa12.71□□□□□ -0.37
CHD9-206ENST00000562791 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
CHD9-206ENST00000562791 ERBB3P21860 1342 aa12.67□□□□□ -0.38
CHD9-206ENST00000562791 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
CHD9-206ENST00000562791 NUDT7P0C024 238 aa12.66□□□□□ -0.38
CHD9-206ENST00000562791 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
CHD9-206ENST00000562791 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
CHD9-206ENST00000562791 PDE4AP27815 886 aa12.65□□□□□ -0.38
CHD9-206ENST00000562791 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
CHD9-206ENST00000562791 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
CHD9-206ENST00000562791 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CHD9-206ENST00000562791 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
CHD9-206ENST00000562791 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
CHD9-206ENST00000562791 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
CHD9-206ENST00000562791 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
CHD9-206ENST00000562791 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
CHD9-206ENST00000562791 MFSD10Q14728 455 aa12.61□□□□□ -0.39
CHD9-206ENST00000562791 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
CHD9-206ENST00000562791 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
CHD9-206ENST00000562791 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD9-206ENST00000562791 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
CHD9-206ENST00000562791 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
CHD9-206ENST00000562791 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
CHD9-206ENST00000562791 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
CHD9-206ENST00000562791 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
CHD9-206ENST00000562791 TBC1D12O60347 775 aa12.48□□□□□ -0.41
CHD9-206ENST00000562791 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
CHD9-206ENST00000562791 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
CHD9-206ENST00000562791 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
CHD9-206ENST00000562791 EVI5O60447 810 aa12.4□□□□□ -0.42
CHD9-206ENST00000562791 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
CHD9-206ENST00000562791 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
CHD9-206ENST00000562791 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
CHD9-206ENST00000562791 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
CHD9-206ENST00000562791 DPYSL4O14531 572 aa12.37□□□□□ -0.43
CHD9-206ENST00000562791 MMRN1Q13201 1228 aa12.37□□□□□ -0.43
CHD9-206ENST00000562791 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
CHD9-206ENST00000562791 PPP4R3BQ5MIZ7 849 aa12.36□□□□□ -0.43
CHD9-206ENST00000562791 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
CHD9-206ENST00000562791 PBX2P40425 430 aa12.34□□□□□ -0.43
CHD9-206ENST00000562791 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHD9-206ENST00000562791 FOSBP53539 338 aa12.33□□□□□ -0.44
CHD9-206ENST00000562791 PSEN2P49810 448 aa12.31□□□□□ -0.44
CHD9-206ENST00000562791 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
CHD9-206ENST00000562791 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
CHD9-206ENST00000562791 ARHGAP33O14559 1287 aa12.3□□□□□ -0.44
CHD9-206ENST00000562791 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
CHD9-206ENST00000562791 E2F4Q16254 413 aa12.29□□□□□ -0.44
CHD9-206ENST00000562791 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CHD9-206ENST00000562791 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
CHD9-206ENST00000562791 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
CHD9-206ENST00000562791 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
CHD9-206ENST00000562791 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
CHD9-206ENST00000562791 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
CHD9-206ENST00000562791 PDIA6Q15084 440 aa12.24□□□□□ -0.45
CHD9-206ENST00000562791 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
CHD9-206ENST00000562791 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
CHD9-206ENST00000562791 PHF14O94880 888 aa12.2□□□□□ -0.46
CHD9-206ENST00000562791 DDX12PQ92771 950 aa12.2□□□□□ -0.46
CHD9-206ENST00000562791 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
CHD9-206ENST00000562791 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
CHD9-206ENST00000562791 PTPREP23469 700 aa12.18□□□□□ -0.46
CHD9-206ENST00000562791 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
CHD9-206ENST00000562791 PTGER2P43116 358 aa12.17□□□□□ -0.46
CHD9-206ENST00000562791 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
CHD9-206ENST00000562791 TK2O00142 265 aa12.16□□□□□ -0.46
CHD9-206ENST00000562791 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
CHD9-206ENST00000562791 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
CHD9-206ENST00000562791 HRO43593 1189 aa12.15□□□□□ -0.46
CHD9-206ENST00000562791 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
CHD9-206ENST00000562791 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
CHD9-206ENST00000562791 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms