RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 ZMYM4Q5VZL5 1548 aa30.39■■■□□ 2.46
MAP1LC3B-203ENST00000562778 LOC105371045A0A1W2PR82 267 aa30.39■■■□□ 2.46
MAP1LC3B-203ENST00000562778 POGZQ7Z3K3 1410 aa30.39■■■□□ 2.45
MAP1LC3B-203ENST00000562778 YEATS2Q9ULM3 1422 aa30.38■■■□□ 2.45
MAP1LC3B-203ENST00000562778 ARID4BQ4LE39 1312 aaPredicted RBP30.37■■■□□ 2.45
MAP1LC3B-203ENST00000562778 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
MAP1LC3B-203ENST00000562778 ZFYVE16Q7Z3T8 1539 aa30.33■■■□□ 2.45
MAP1LC3B-203ENST00000562778 PREX2Q70Z35 1606 aa30.32■■■□□ 2.44
MAP1LC3B-203ENST00000562778 ADAMTSL3P82987 1691 aa30.31■■■□□ 2.44
MAP1LC3B-203ENST00000562778 BCORL1Q5H9F3 1711 aa30.3■■■□□ 2.44
MAP1LC3B-203ENST00000562778 SIGLEC1Q9BZZ2 1709 aa30.29■■■□□ 2.44
MAP1LC3B-203ENST00000562778 CDC42BPAQ5VT25 1732 aa30.28■■■□□ 2.44
MAP1LC3B-203ENST00000562778 MAGI2Q86UL8 1455 aa30.28■■■□□ 2.44
MAP1LC3B-203ENST00000562778 AFAP1Q8N556 730 aa30.27■■■□□ 2.44
MAP1LC3B-203ENST00000562778 MADDQ8WXG6 1647 aa30.24■■■□□ 2.43
MAP1LC3B-203ENST00000562778 ZNF518AQ6AHZ1 1483 aa30.24■■■□□ 2.43
MAP1LC3B-203ENST00000562778 ARHGEF12Q9NZN5 1544 aa30.22■■■□□ 2.43
MAP1LC3B-203ENST00000562778 PTPRMP28827 1452 aa30.21■■■□□ 2.43
MAP1LC3B-203ENST00000562778 MTUS2Q5JR59 1369 aa30.21■■■□□ 2.43
MAP1LC3B-203ENST00000562778 ABCC1P33527 1531 aa30.21■■■□□ 2.43
MAP1LC3B-203ENST00000562778 GPATCH8Q9UKJ3 1502 aaKnown RBP30.2■■■□□ 2.42
MAP1LC3B-203ENST00000562778 KDM5CP41229 1560 aa30.2■■■□□ 2.42
MAP1LC3B-203ENST00000562778 ZNF777Q9ULD5 760 aaPredicted RBP30.19■■■□□ 2.42
MAP1LC3B-203ENST00000562778 TRAPPC8Q9Y2L5 1435 aa30.19■■■□□ 2.42
MAP1LC3B-203ENST00000562778 HECW2Q9P2P5 1572 aa30.18■■■□□ 2.42
MAP1LC3B-203ENST00000562778 ATP10AO60312 1499 aa30.18■■■□□ 2.42
MAP1LC3B-203ENST00000562778 ITSN2Q9NZM3 1697 aa30.17■■■□□ 2.42
MAP1LC3B-203ENST00000562778 MLECQ14165 292 aa30.16■■■□□ 2.42
MAP1LC3B-203ENST00000562778 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
MAP1LC3B-203ENST00000562778 SAMD9LQ8IVG5 1584 aa30.14■■■□□ 2.42
MAP1LC3B-203ENST00000562778 RIMS1Q86UR5 1692 aaKnown RBP30.14■■■□□ 2.41
MAP1LC3B-203ENST00000562778 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
MAP1LC3B-203ENST00000562778 C9orf84Q5VXU9 1444 aa30.13■■■□□ 2.41
MAP1LC3B-203ENST00000562778 EHBP1L1Q8N3D4 1523 aa30.11■■■□□ 2.41
MAP1LC3B-203ENST00000562778 DIP2CQ9Y2E4 1556 aa30.09■■■□□ 2.41
MAP1LC3B-203ENST00000562778 MLH3Q9UHC1 1453 aa30.08■■■□□ 2.41
MAP1LC3B-203ENST00000562778 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
MAP1LC3B-203ENST00000562778 ABCA6Q8N139 1617 aa30.07■■■□□ 2.4
MAP1LC3B-203ENST00000562778 SYCP2Q9BX26 1530 aa30.07■■■□□ 2.4
MAP1LC3B-203ENST00000562778 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
MAP1LC3B-203ENST00000562778 PLPPR3Q6T4P5 718 aa30.06■■■□□ 2.4
MAP1LC3B-203ENST00000562778 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
MAP1LC3B-203ENST00000562778 TIAM1Q13009 1591 aa30.05■■■□□ 2.4
MAP1LC3B-203ENST00000562778 KIDINS220Q9ULH0 1771 aa30.02■■■□□ 2.4
MAP1LC3B-203ENST00000562778 FER1L4A9Z1Z3 1794 aa30.01■■■□□ 2.39
MAP1LC3B-203ENST00000562778 ZNF644Q9H582 1327 aaPredicted RBP30■■■□□ 2.39
MAP1LC3B-203ENST00000562778 KIAA1107Q9UPP5 1409 aa29.96■■■□□ 2.39
MAP1LC3B-203ENST00000562778 REREQ9P2R6 1566 aa29.96■■■□□ 2.39
MAP1LC3B-203ENST00000562778 NCOA2Q15596 1464 aa29.96■■■□□ 2.39
MAP1LC3B-203ENST00000562778 PLEKHH2Q8IVE3 1493 aa29.95■■■□□ 2.39
MAP1LC3B-203ENST00000562778 SUPT6HQ7KZ85 1726 aaKnown RBP29.94■■■□□ 2.38
MAP1LC3B-203ENST00000562778 SPAG9O60271 1321 aaKnown RBP29.94■■■□□ 2.38
MAP1LC3B-203ENST00000562778 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.38
MAP1LC3B-203ENST00000562778 LMTK3Q96Q04 1460 aa29.88■■■□□ 2.37
MAP1LC3B-203ENST00000562778 ATP7AQ04656 1500 aa29.88■■■□□ 2.37
MAP1LC3B-203ENST00000562778 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
MAP1LC3B-203ENST00000562778 KANK4Q5T7N3 995 aaPredicted RBP29.88■■■□□ 2.37
MAP1LC3B-203ENST00000562778 AGLP35573 1532 aa29.87■■■□□ 2.37
MAP1LC3B-203ENST00000562778 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
MAP1LC3B-203ENST00000562778 MBD5Q9P267 1494 aa29.86■■■□□ 2.37
MAP1LC3B-203ENST00000562778 CAMSAP2Q08AD1 1489 aa29.81■■■□□ 2.36
MAP1LC3B-203ENST00000562778 MAP3K1Q13233 1512 aa29.8■■■□□ 2.36
MAP1LC3B-203ENST00000562778 HSPA2P54652 639 aa29.79■■■□□ 2.36
MAP1LC3B-203ENST00000562778 A2MP01023 1474 aa29.76■■■□□ 2.35
MAP1LC3B-203ENST00000562778 PLXNC1O60486 1568 aa29.75■■■□□ 2.35
MAP1LC3B-203ENST00000562778 ESF1Q9H501 851 aaKnown RBP29.73■■■□□ 2.35
MAP1LC3B-203ENST00000562778 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
MAP1LC3B-203ENST00000562778 C3P01024 1663 aa29.72■■■□□ 2.35
MAP1LC3B-203ENST00000562778 ADGBQ8N7X0 1667 aa29.69■■■□□ 2.34
MAP1LC3B-203ENST00000562778 RTEL1-TNFRSF6BF6WH68 1400 aa29.69■■■□□ 2.34
MAP1LC3B-203ENST00000562778 PREX1Q8TCU6 1659 aa29.67■■■□□ 2.34
MAP1LC3B-203ENST00000562778 APLP2Q06481 763 aa29.66■■■□□ 2.34
MAP1LC3B-203ENST00000562778 MYOM3Q5VTT5 1437 aa29.65■■■□□ 2.34
MAP1LC3B-203ENST00000562778 GGT6Q6P531 493 aa29.65■■■□□ 2.34
MAP1LC3B-203ENST00000562778 ARHGEF5Q12774 1597 aa29.64■■■□□ 2.34
MAP1LC3B-203ENST00000562778 CNTLNQ9NXG0 1405 aa29.64■■■□□ 2.34
MAP1LC3B-203ENST00000562778 RSPH4AQ5TD94 716 aa29.63■■■□□ 2.33
MAP1LC3B-203ENST00000562778 DHX29Q7Z478 1369 aaKnown RBP29.61■■■□□ 2.33
MAP1LC3B-203ENST00000562778 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
MAP1LC3B-203ENST00000562778 SETD1BQ9UPS6 1966 aaKnown RBP29.6■■■□□ 2.33
MAP1LC3B-203ENST00000562778 ZMYM3Q14202 1370 aa29.58■■■□□ 2.33
MAP1LC3B-203ENST00000562778 UHRF1BP1Q6BDS2 1440 aa29.58■■■□□ 2.33
MAP1LC3B-203ENST00000562778 MIA2Q96PC5 1412 aa29.58■■■□□ 2.33
MAP1LC3B-203ENST00000562778 MROH2AA6NES4 1674 aa29.57■■■□□ 2.32
MAP1LC3B-203ENST00000562778 TSPY4P0CV99 314 aa29.57■■■□□ 2.32
MAP1LC3B-203ENST00000562778 TSPY10P0CW01 314 aa29.57■■■□□ 2.32
MAP1LC3B-203ENST00000562778 ILDR1Q86SU0 546 aaPredicted RBP29.56■■■□□ 2.32
MAP1LC3B-203ENST00000562778 KIF3BO15066 747 aa29.53■■■□□ 2.32
MAP1LC3B-203ENST00000562778 MAST1Q9Y2H9 1570 aa29.49■■■□□ 2.31
MAP1LC3B-203ENST00000562778 PTPN23Q9H3S7 1636 aa29.47■■■□□ 2.31
MAP1LC3B-203ENST00000562778 NPATQ14207 1427 aa29.46■■■□□ 2.31
MAP1LC3B-203ENST00000562778 PPP6R1Q9UPN7 881 aa29.46■■■□□ 2.31
MAP1LC3B-203ENST00000562778 PTPRKQ15262 1439 aa29.45■■■□□ 2.3
MAP1LC3B-203ENST00000562778 STRCQ7RTU9 1775 aa29.44■■■□□ 2.3
MAP1LC3B-203ENST00000562778 FGD6Q6ZV73 1430 aa29.44■■■□□ 2.3
MAP1LC3B-203ENST00000562778 ABCC5O15440 1437 aa29.41■■■□□ 2.3
MAP1LC3B-203ENST00000562778 TCOF1Q13428 1488 aaKnown RBP29.38■■■□□ 2.29
MAP1LC3B-203ENST00000562778 CROCC2H7BZ55 1655 aa29.37■■■□□ 2.29
MAP1LC3B-203ENST00000562778 KDM5DQ9BY66 1539 aa29.37■■■□□ 2.29
MAP1LC3B-203ENST00000562778 WASHC2CQ9Y4E1 1318 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms