RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 RGL2O15211 777 aa9.08□□□□□ -0.96
CAPN3-211ENST00000562199 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
CAPN3-211ENST00000562199 STK25O00506 426 aa9.07□□□□□ -0.96
CAPN3-211ENST00000562199 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-211ENST00000562199 MICALL2Q8IY33 904 aa9.05□□□□□ -0.96
CAPN3-211ENST00000562199 BCANQ96GW7 911 aa9.04□□□□□ -0.96
CAPN3-211ENST00000562199 EMP3P54852 163 aa9.03□□□□□ -0.96
CAPN3-211ENST00000562199 NLRP6P59044 892 aa9.03□□□□□ -0.96
CAPN3-211ENST00000562199 TMEM92Q6UXU6 159 aa9.02□□□□□ -0.97
CAPN3-211ENST00000562199 HOXB3P14651 431 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-211ENST00000562199 FAM205CA6NFA0 338 aa9□□□□□ -0.97
CAPN3-211ENST00000562199 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
CAPN3-211ENST00000562199 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
CAPN3-211ENST00000562199 MFRPQ9BY79 579 aa9□□□□□ -0.97
CAPN3-211ENST00000562199 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
CAPN3-211ENST00000562199 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
CAPN3-211ENST00000562199 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
CAPN3-211ENST00000562199 DOK7Q18PE1 504 aa8.96□□□□□ -0.98
CAPN3-211ENST00000562199 TPRNQ4KMQ1 711 aa8.96□□□□□ -0.98
CAPN3-211ENST00000562199 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
CAPN3-211ENST00000562199 HOXB1P14653 301 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-211ENST00000562199 RIMBP2O15034 1052 aa8.91□□□□□ -0.98
CAPN3-211ENST00000562199 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
CAPN3-211ENST00000562199 ERBB3P21860 1342 aa8.9□□□□□ -0.98
CAPN3-211ENST00000562199 PPP1R37O75864 691 aa8.88□□□□□ -0.99
CAPN3-211ENST00000562199 SPNS2Q8IVW8 549 aa8.88□□□□□ -0.99
CAPN3-211ENST00000562199 CHGAP10645 457 aaKnown RBP8.87□□□□□ -0.99
CAPN3-211ENST00000562199 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
CAPN3-211ENST00000562199 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
CAPN3-211ENST00000562199 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
CAPN3-211ENST00000562199 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
CAPN3-211ENST00000562199 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
CAPN3-211ENST00000562199 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
CAPN3-211ENST00000562199 KHSRPQ92945 711 aaKnown RBP eCLIP8.85□□□□□ -0.99
CAPN3-211ENST00000562199 MMRN1Q13201 1228 aa8.84□□□□□ -0.99
CAPN3-211ENST00000562199 NPM2Q86SE8 214 aaKnown RBP8.84□□□□□ -0.99
CAPN3-211ENST00000562199 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
CAPN3-211ENST00000562199 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
CAPN3-211ENST00000562199 TMC2Q8TDI7 906 aa8.82□□□□□ -1
CAPN3-211ENST00000562199 KIF3CO14782 793 aa8.81□□□□□ -1
CAPN3-211ENST00000562199 PLCB2Q00722 1185 aa8.81□□□□□ -1
CAPN3-211ENST00000562199 BCL11AQ9H165 835 aa8.8□□□□□ -1
CAPN3-211ENST00000562199 NUDT7P0C024 238 aa8.76□□□□□ -1.01
CAPN3-211ENST00000562199 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-211ENST00000562199 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
CAPN3-211ENST00000562199 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-211ENST00000562199 DCAF8L2P0C7V8 631 aa8.74□□□□□ -1.01
CAPN3-211ENST00000562199 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
CAPN3-211ENST00000562199 TMEM132AQ24JP5 1023 aa8.7□□□□□ -1.02
CAPN3-211ENST00000562199 PLPP6Q8IY26 295 aa8.7□□□□□ -1.02
CAPN3-211ENST00000562199 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
CAPN3-211ENST00000562199 SLC34A2O95436 690 aa8.69□□□□□ -1.02
CAPN3-211ENST00000562199 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-211ENST00000562199 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
CAPN3-211ENST00000562199 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
CAPN3-211ENST00000562199 GPHNQ9NQX3 736 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-211ENST00000562199 FOXK1P85037 733 aa8.67□□□□□ -1.02
CAPN3-211ENST00000562199 DSG2Q14126 1118 aa8.67□□□□□ -1.02
CAPN3-211ENST00000562199 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
CAPN3-211ENST00000562199 AXIN2Q9Y2T1 843 aa8.65□□□□□ -1.02
CAPN3-211ENST00000562199 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
CAPN3-211ENST00000562199 PTCD2Q8WV60 388 aaKnown RBP8.63□□□□□ -1.03
CAPN3-211ENST00000562199 GTPBP6O43824 516 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-211ENST00000562199 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-211ENST00000562199 MYT1LQ9UL68 1186 aa8.62□□□□□ -1.03
CAPN3-211ENST00000562199 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-211ENST00000562199 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
CAPN3-211ENST00000562199 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-211ENST00000562199 TBC1D12O60347 775 aa8.59□□□□□ -1.03
CAPN3-211ENST00000562199 KDM4FA0A1W2PPD8 638 aa8.58□□□□□ -1.04
CAPN3-211ENST00000562199 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
CAPN3-211ENST00000562199 NCKAP5LQ9HCH0 1330 aa8.57□□□□□ -1.04
CAPN3-211ENST00000562199 PDE4AP27815 886 aa8.57□□□□□ -1.04
CAPN3-211ENST00000562199 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
CAPN3-211ENST00000562199 FAM9AQ8IZU1 332 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-211ENST00000562199 PBX2P40425 430 aa8.56□□□□□ -1.04
CAPN3-211ENST00000562199 TRIM26Q12899 539 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-211ENST00000562199 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
CAPN3-211ENST00000562199 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
CAPN3-211ENST00000562199 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
CAPN3-211ENST00000562199 PSDA5PKW4 1024 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-211ENST00000562199 ARHGAP33O14559 1287 aa8.54□□□□□ -1.04
CAPN3-211ENST00000562199 PSEN2P49810 448 aa8.54□□□□□ -1.04
CAPN3-211ENST00000562199 LOC105371045A0A1W2PR82 267 aa8.53□□□□□ -1.04
CAPN3-211ENST00000562199 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
CAPN3-211ENST00000562199 PTGER2P43116 358 aa8.52□□□□□ -1.05
CAPN3-211ENST00000562199 PPP4R3BQ5MIZ7 849 aa8.52□□□□□ -1.05
CAPN3-211ENST00000562199 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
CAPN3-211ENST00000562199 DDX27Q96GQ7 796 aaKnown RBP8.5□□□□□ -1.05
CAPN3-211ENST00000562199 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
CAPN3-211ENST00000562199 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
CAPN3-211ENST00000562199 ZNF454Q8N9F8 522 aa8.49□□□□□ -1.05
CAPN3-211ENST00000562199 UBE2Q2Q8WVN8 375 aa8.49□□□□□ -1.05
CAPN3-211ENST00000562199 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
CAPN3-211ENST00000562199 EVI5O60447 810 aa8.46□□□□□ -1.06
CAPN3-211ENST00000562199 MAP3K9P80192 1104 aa8.46□□□□□ -1.06
CAPN3-211ENST00000562199 HRCP23327 699 aa8.44□□□□□ -1.06
CAPN3-211ENST00000562199 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
CAPN3-211ENST00000562199 MFSD10Q14728 455 aa8.43□□□□□ -1.06
CAPN3-211ENST00000562199 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms