RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
TUBGCP4-203ENST00000562053 RICTORQ6R327 1708 aa11.37□□□□□ -0.59
TUBGCP4-203ENST00000562053 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
TUBGCP4-203ENST00000562053 PLCH2O75038 1416 aa11.35□□□□□ -0.59
TUBGCP4-203ENST00000562053 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
TUBGCP4-203ENST00000562053 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
TUBGCP4-203ENST00000562053 PHLDB1Q86UU1 1377 aa11.34□□□□□ -0.59
TUBGCP4-203ENST00000562053 ABCC1P33527 1531 aa11.34□□□□□ -0.59
TUBGCP4-203ENST00000562053 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
TUBGCP4-203ENST00000562053 LRRC9Q6ZRR7 1453 aa11.33□□□□□ -0.6
TUBGCP4-203ENST00000562053 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
TUBGCP4-203ENST00000562053 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
TUBGCP4-203ENST00000562053 ADGRL1O94910 1474 aa11.32□□□□□ -0.6
TUBGCP4-203ENST00000562053 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
TUBGCP4-203ENST00000562053 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
TUBGCP4-203ENST00000562053 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
TUBGCP4-203ENST00000562053 KDM5CP41229 1560 aa11.3□□□□□ -0.6
TUBGCP4-203ENST00000562053 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
TUBGCP4-203ENST00000562053 DENND4BO75064 1496 aaPredicted RBP11.29□□□□□ -0.6
TUBGCP4-203ENST00000562053 SYCP2Q9BX26 1530 aa11.28□□□□□ -0.6
TUBGCP4-203ENST00000562053 HECW2Q9P2P5 1572 aa11.27□□□□□ -0.61
TUBGCP4-203ENST00000562053 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
TUBGCP4-203ENST00000562053 ZNF518AQ6AHZ1 1483 aa11.26□□□□□ -0.61
TUBGCP4-203ENST00000562053 ARHGEF12Q9NZN5 1544 aa11.25□□□□□ -0.61
TUBGCP4-203ENST00000562053 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
TUBGCP4-203ENST00000562053 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
TUBGCP4-203ENST00000562053 ZFYVE16Q7Z3T8 1539 aa11.25□□□□□ -0.61
TUBGCP4-203ENST00000562053 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
TUBGCP4-203ENST00000562053 EFCAB2Q5VUJ9 269 aa11.23□□□□□ -0.61
TUBGCP4-203ENST00000562053 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
TUBGCP4-203ENST00000562053 MAGI2Q86UL8 1455 aa11.23□□□□□ -0.61
TUBGCP4-203ENST00000562053 ABCA6Q8N139 1617 aa11.23□□□□□ -0.61
TUBGCP4-203ENST00000562053 KANK4Q5T7N3 995 aaPredicted RBP11.22□□□□□ -0.61
TUBGCP4-203ENST00000562053 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
TUBGCP4-203ENST00000562053 KIAA1107Q9UPP5 1409 aa11.22□□□□□ -0.61
TUBGCP4-203ENST00000562053 DIP2CQ9Y2E4 1556 aa11.22□□□□□ -0.61
TUBGCP4-203ENST00000562053 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.61
TUBGCP4-203ENST00000562053 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.61
TUBGCP4-203ENST00000562053 CROCC2H7BZ55 1655 aa11.2□□□□□ -0.62
TUBGCP4-203ENST00000562053 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
TUBGCP4-203ENST00000562053 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
TUBGCP4-203ENST00000562053 TRAPPC8Q9Y2L5 1435 aa11.2□□□□□ -0.62
TUBGCP4-203ENST00000562053 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
TUBGCP4-203ENST00000562053 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 YEATS2Q9ULM3 1422 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 PTPN23Q9H3S7 1636 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
TUBGCP4-203ENST00000562053 APLP2Q06481 763 aa11.18□□□□□ -0.62
TUBGCP4-203ENST00000562053 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
TUBGCP4-203ENST00000562053 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
TUBGCP4-203ENST00000562053 BCORL1Q5H9F3 1711 aa11.17□□□□□ -0.62
TUBGCP4-203ENST00000562053 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
TUBGCP4-203ENST00000562053 FGD6Q6ZV73 1430 aa11.17□□□□□ -0.62
TUBGCP4-203ENST00000562053 PLXNC1O60486 1568 aa11.16□□□□□ -0.62
TUBGCP4-203ENST00000562053 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
TUBGCP4-203ENST00000562053 TCOF1Q13428 1488 aaKnown RBP11.16□□□□□ -0.62
TUBGCP4-203ENST00000562053 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
TUBGCP4-203ENST00000562053 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
TUBGCP4-203ENST00000562053 ADRA2BP18089 450 aa11.15□□□□□ -0.62
TUBGCP4-203ENST00000562053 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
TUBGCP4-203ENST00000562053 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
TUBGCP4-203ENST00000562053 ATP10AO60312 1499 aa11.13□□□□□ -0.63
TUBGCP4-203ENST00000562053 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
TUBGCP4-203ENST00000562053 ZNF644Q9H582 1327 aaPredicted RBP11.13□□□□□ -0.63
TUBGCP4-203ENST00000562053 ZNF777Q9ULD5 760 aaPredicted RBP11.13□□□□□ -0.63
TUBGCP4-203ENST00000562053 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
TUBGCP4-203ENST00000562053 AGLP35573 1532 aa11.12□□□□□ -0.63
TUBGCP4-203ENST00000562053 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
TUBGCP4-203ENST00000562053 FER1L4A9Z1Z3 1794 aa11.11□□□□□ -0.63
TUBGCP4-203ENST00000562053 RTEL1-TNFRSF6BF6WH68 1400 aa11.1□□□□□ -0.63
TUBGCP4-203ENST00000562053 HNRNPMP52272 730 aaKnown RBP eCLIP11.09□□□□□ -0.63
TUBGCP4-203ENST00000562053 EIF2AK4Q9P2K8 1649 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-203ENST00000562053 DAPK1P53355 1430 aa11.08□□□□□ -0.64
TUBGCP4-203ENST00000562053 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-203ENST00000562053 RIMS1Q86UR5 1692 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-203ENST00000562053 A2MP01023 1474 aa11.07□□□□□ -0.64
TUBGCP4-203ENST00000562053 ABCC5O15440 1437 aa11.06□□□□□ -0.64
TUBGCP4-203ENST00000562053 RNF17Q9BXT8 1623 aaKnown RBP11.06□□□□□ -0.64
TUBGCP4-203ENST00000562053 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
TUBGCP4-203ENST00000562053 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
TUBGCP4-203ENST00000562053 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
TUBGCP4-203ENST00000562053 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
TUBGCP4-203ENST00000562053 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
TUBGCP4-203ENST00000562053 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
TUBGCP4-203ENST00000562053 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
TUBGCP4-203ENST00000562053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
TUBGCP4-203ENST00000562053 PTPRMP28827 1452 aa11.02□□□□□ -0.65
TUBGCP4-203ENST00000562053 DEPDC5O75140 1603 aa11.02□□□□□ -0.65
TUBGCP4-203ENST00000562053 MROH1Q8NDA8 1641 aa11.02□□□□□ -0.65
TUBGCP4-203ENST00000562053 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
TUBGCP4-203ENST00000562053 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
TUBGCP4-203ENST00000562053 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
TUBGCP4-203ENST00000562053 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
TUBGCP4-203ENST00000562053 PRDM15P57071 1507 aaPredicted RBP11□□□□□ -0.65
TUBGCP4-203ENST00000562053 C3P01024 1663 aa11□□□□□ -0.65
TUBGCP4-203ENST00000562053 CLTCQ00610 1675 aaKnown RBP11□□□□□ -0.65
TUBGCP4-203ENST00000562053 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
TUBGCP4-203ENST00000562053 KIF15Q9NS87 1388 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms