RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
DENND4A-204ENST00000562028 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
DENND4A-204ENST00000562028 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
DENND4A-204ENST00000562028 MFSD10Q14728 455 aa13.35□□□□□ -0.27
DENND4A-204ENST00000562028 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
DENND4A-204ENST00000562028 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
DENND4A-204ENST00000562028 E2F4Q16254 413 aa13.29□□□□□ -0.28
DENND4A-204ENST00000562028 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
DENND4A-204ENST00000562028 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
DENND4A-204ENST00000562028 NBR1Q14596 966 aa13.26□□□□□ -0.29
DENND4A-204ENST00000562028 KIF3CO14782 793 aa13.24□□□□□ -0.29
DENND4A-204ENST00000562028 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
DENND4A-204ENST00000562028 FOXK1P85037 733 aa13.23□□□□□ -0.29
DENND4A-204ENST00000562028 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
DENND4A-204ENST00000562028 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
DENND4A-204ENST00000562028 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
DENND4A-204ENST00000562028 DSG2Q14126 1118 aa13.21□□□□□ -0.29
DENND4A-204ENST00000562028 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
DENND4A-204ENST00000562028 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
DENND4A-204ENST00000562028 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
DENND4A-204ENST00000562028 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
DENND4A-204ENST00000562028 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
DENND4A-204ENST00000562028 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
DENND4A-204ENST00000562028 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
DENND4A-204ENST00000562028 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
DENND4A-204ENST00000562028 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
DENND4A-204ENST00000562028 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
DENND4A-204ENST00000562028 DPYSL4O14531 572 aa13.01□□□□□ -0.33
DENND4A-204ENST00000562028 SEMA3EO15041 775 aa13□□□□□ -0.33
DENND4A-204ENST00000562028 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
DENND4A-204ENST00000562028 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
DENND4A-204ENST00000562028 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
DENND4A-204ENST00000562028 SLC34A2O95436 690 aa12.98□□□□□ -0.33
DENND4A-204ENST00000562028 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
DENND4A-204ENST00000562028 PDIA6Q15084 440 aa12.97□□□□□ -0.33
DENND4A-204ENST00000562028 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.33
DENND4A-204ENST00000562028 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
DENND4A-204ENST00000562028 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
DENND4A-204ENST00000562028 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
DENND4A-204ENST00000562028 TBC1D12O60347 775 aa12.93□□□□□ -0.34
DENND4A-204ENST00000562028 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
DENND4A-204ENST00000562028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
DENND4A-204ENST00000562028 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
DENND4A-204ENST00000562028 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
DENND4A-204ENST00000562028 MLLT3P42568 568 aaPredicted RBP12.86□□□□□ -0.35
DENND4A-204ENST00000562028 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
DENND4A-204ENST00000562028 EVI5O60447 810 aa12.85□□□□□ -0.35
DENND4A-204ENST00000562028 LHX8Q68G74 356 aa12.85□□□□□ -0.35
DENND4A-204ENST00000562028 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
DENND4A-204ENST00000562028 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
DENND4A-204ENST00000562028 PTGER2P43116 358 aa12.84□□□□□ -0.35
DENND4A-204ENST00000562028 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
DENND4A-204ENST00000562028 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
DENND4A-204ENST00000562028 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
DENND4A-204ENST00000562028 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
DENND4A-204ENST00000562028 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
DENND4A-204ENST00000562028 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
DENND4A-204ENST00000562028 SNPHO15079 494 aa12.79□□□□□ -0.36
DENND4A-204ENST00000562028 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
DENND4A-204ENST00000562028 GRXCR2A6NFK2 248 aa12.77□□□□□ -0.37
DENND4A-204ENST00000562028 ZNF710Q8N1W2 664 aa12.75□□□□□ -0.37
DENND4A-204ENST00000562028 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
DENND4A-204ENST00000562028 GPR153Q6NV75 609 aa12.74□□□□□ -0.37
DENND4A-204ENST00000562028 DDX12PQ92771 950 aa12.74□□□□□ -0.37
DENND4A-204ENST00000562028 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
DENND4A-204ENST00000562028 OSBPP22059 807 aa12.72□□□□□ -0.37
DENND4A-204ENST00000562028 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
DENND4A-204ENST00000562028 PHF14O94880 888 aa12.7□□□□□ -0.38
DENND4A-204ENST00000562028 NUDT7P0C024 238 aa12.69□□□□□ -0.38
DENND4A-204ENST00000562028 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.389e-15■■■■□ 20.7
DENND4A-204ENST00000562028 EPAS1Q99814 870 aa12.69□□□□□ -0.38
DENND4A-204ENST00000562028 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
DENND4A-204ENST00000562028 JPH4Q96JJ6 628 aa12.66□□□□□ -0.38
DENND4A-204ENST00000562028 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
DENND4A-204ENST00000562028 PCDHGA10Q9Y5H3 936 aa12.65□□□□□ -0.38
DENND4A-204ENST00000562028 FOSBP53539 338 aa12.63□□□□□ -0.39
DENND4A-204ENST00000562028 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
DENND4A-204ENST00000562028 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
DENND4A-204ENST00000562028 ZMYND10O75800 440 aa12.62□□□□□ -0.39
DENND4A-204ENST00000562028 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
DENND4A-204ENST00000562028 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
DENND4A-204ENST00000562028 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
DENND4A-204ENST00000562028 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
DENND4A-204ENST00000562028 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
DENND4A-204ENST00000562028 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
DENND4A-204ENST00000562028 GPR37O15354 613 aa12.58□□□□□ -0.4
DENND4A-204ENST00000562028 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
DENND4A-204ENST00000562028 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
DENND4A-204ENST00000562028 MAP3K7O43318 606 aa12.56□□□□□ -0.4
DENND4A-204ENST00000562028 FCHSD2O94868 740 aa12.55□□□□□ -0.4
DENND4A-204ENST00000562028 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
DENND4A-204ENST00000562028 PTGDRQ13258 359 aa12.53□□□□□ -0.4
DENND4A-204ENST00000562028 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
DENND4A-204ENST00000562028 HIC1Q14526 733 aa12.52□□□□□ -0.41
DENND4A-204ENST00000562028 ST18O60284 1047 aa12.51□□□□□ -0.41
DENND4A-204ENST00000562028 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
DENND4A-204ENST00000562028 GNPATO15228 680 aa12.5□□□□□ -0.41
DENND4A-204ENST00000562028 TSR1Q2NL82 804 aaKnown RBP12.5□□□□□ -0.41
DENND4A-204ENST00000562028 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
DENND4A-204ENST00000562028 SLC24A3Q9HC58 644 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms