RNA–Protein interactions for RNA: ENST00000562002.5

LINC01227-203, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 2

Gene LINC01227, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-203ENST00000562002 RYDENQ9NUL5 291 aaKnown RBP18.42■□□□□ 0.54
LINC01227-203ENST00000562002 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
LINC01227-203ENST00000562002 C2orf72A6NCS6 295 aa18.38■□□□□ 0.53
LINC01227-203ENST00000562002 MARVELD3Q96A59 401 aa18.36■□□□□ 0.53
LINC01227-203ENST00000562002 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
LINC01227-203ENST00000562002 ZNF710Q8N1W2 664 aa18.34■□□□□ 0.53
LINC01227-203ENST00000562002 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
LINC01227-203ENST00000562002 TMC2Q8TDI7 906 aa18.31■□□□□ 0.52
LINC01227-203ENST00000562002 RIMBP2O15034 1052 aa18.3■□□□□ 0.52
LINC01227-203ENST00000562002 HOXB1P14653 301 aaPredicted RBP18.29■□□□□ 0.52
LINC01227-203ENST00000562002 EMP3P54852 163 aa18.28■□□□□ 0.52
LINC01227-203ENST00000562002 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
LINC01227-203ENST00000562002 CDAN1Q8IWY9 1227 aa18.22■□□□□ 0.51
LINC01227-203ENST00000562002 GPR153Q6NV75 609 aa18.21■□□□□ 0.51
LINC01227-203ENST00000562002 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
LINC01227-203ENST00000562002 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
LINC01227-203ENST00000562002 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
LINC01227-203ENST00000562002 FOXK1P85037 733 aa18.16■□□□□ 0.5
LINC01227-203ENST00000562002 POTEB3A0JP26 581 aa18.15■□□□□ 0.5
LINC01227-203ENST00000562002 POTEBQ6S5H4 581 aa18.15■□□□□ 0.5
LINC01227-203ENST00000562002 HS3ST6Q96QI5 342 aa18.15■□□□□ 0.5
LINC01227-203ENST00000562002 SLC34A2O95436 690 aa18.13■□□□□ 0.49
LINC01227-203ENST00000562002 ARSIQ5FYB1 569 aa18.13■□□□□ 0.49
LINC01227-203ENST00000562002 CRISPLD2Q9H0B8 497 aa18.13■□□□□ 0.49
LINC01227-203ENST00000562002 DSG2Q14126 1118 aa18.11■□□□□ 0.49
LINC01227-203ENST00000562002 PLPP6Q8IY26 295 aa18.09■□□□□ 0.49
LINC01227-203ENST00000562002 KHSRPQ92945 711 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC01227-203ENST00000562002 ERBB3P21860 1342 aa18.07■□□□□ 0.48
LINC01227-203ENST00000562002 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
LINC01227-203ENST00000562002 PCDHGA4Q9Y5G9 962 aa18.05■□□□□ 0.48
LINC01227-203ENST00000562002 PLSCR2Q9NRY7 297 aa18.03■□□□□ 0.48
LINC01227-203ENST00000562002 PDE4AP27815 886 aa18.01■□□□□ 0.47
LINC01227-203ENST00000562002 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
LINC01227-203ENST00000562002 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
LINC01227-203ENST00000562002 NUDT7P0C024 238 aa17.98■□□□□ 0.47
LINC01227-203ENST00000562002 PPP1R15BQ5SWA1 713 aa17.98■□□□□ 0.47
LINC01227-203ENST00000562002 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
LINC01227-203ENST00000562002 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
LINC01227-203ENST00000562002 KRTAP3-3Q9BYR6 98 aa17.96■□□□□ 0.47
LINC01227-203ENST00000562002 KRTAP3-2Q9BYR7 98 aa17.96■□□□□ 0.47
LINC01227-203ENST00000562002 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
LINC01227-203ENST00000562002 SPRYD3Q8NCJ5 442 aa17.95■□□□□ 0.46
LINC01227-203ENST00000562002 LARP6Q9BRS8 491 aaKnown RBP17.92■□□□□ 0.46
LINC01227-203ENST00000562002 MFSD10Q14728 455 aa17.91■□□□□ 0.46
LINC01227-203ENST00000562002 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
LINC01227-203ENST00000562002 DDX27Q96GQ7 796 aaKnown RBP17.89■□□□□ 0.45
LINC01227-203ENST00000562002 ZNF687Q8N1G0 1237 aa17.88■□□□□ 0.45
LINC01227-203ENST00000562002 OXER1Q8TDS5 423 aa17.87■□□□□ 0.45
LINC01227-203ENST00000562002 LHX6Q9UPM6 363 aa17.87■□□□□ 0.45
LINC01227-203ENST00000562002 PAXIP1Q6ZW49 1069 aaPredicted RBP17.85■□□□□ 0.45
LINC01227-203ENST00000562002 TBC1D12O60347 775 aa17.83■□□□□ 0.44
LINC01227-203ENST00000562002 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
LINC01227-203ENST00000562002 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC01227-203ENST00000562002 SPNS2Q8IVW8 549 aa17.78■□□□□ 0.44
LINC01227-203ENST00000562002 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
LINC01227-203ENST00000562002 EMILIN3Q9NT22 766 aa17.72■□□□□ 0.43
LINC01227-203ENST00000562002 CAMK2BQ13554 666 aa17.67■□□□□ 0.42
LINC01227-203ENST00000562002 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
LINC01227-203ENST00000562002 MMRN1Q13201 1228 aa17.66■□□□□ 0.42
LINC01227-203ENST00000562002 PBX2P40425 430 aa17.65■□□□□ 0.42
LINC01227-203ENST00000562002 EVI5O60447 810 aa17.62■□□□□ 0.41
LINC01227-203ENST00000562002 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
LINC01227-203ENST00000562002 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
LINC01227-203ENST00000562002 PPP4R3BQ5MIZ7 849 aa17.61■□□□□ 0.41
LINC01227-203ENST00000562002 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
LINC01227-203ENST00000562002 LSM11P83369 360 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC01227-203ENST00000562002 ARHGAP33O14559 1287 aa17.55■□□□□ 0.4
LINC01227-203ENST00000562002 FOSBP53539 338 aa17.54■□□□□ 0.4
LINC01227-203ENST00000562002 ZNF454Q8N9F8 522 aa17.54■□□□□ 0.4
LINC01227-203ENST00000562002 ANKRD13DQ6ZTN6 518 aa17.53■□□□□ 0.4
LINC01227-203ENST00000562002 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
LINC01227-203ENST00000562002 DPYSL4O14531 572 aa17.5■□□□□ 0.39
LINC01227-203ENST00000562002 PSEN2P49810 448 aa17.48■□□□□ 0.39
LINC01227-203ENST00000562002 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
LINC01227-203ENST00000562002 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
LINC01227-203ENST00000562002 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
LINC01227-203ENST00000562002 PTGER2P43116 358 aa17.44■□□□□ 0.38
LINC01227-203ENST00000562002 E2F4Q16254 413 aa17.44■□□□□ 0.38
LINC01227-203ENST00000562002 DMRTA1Q5VZB9 504 aa17.44■□□□□ 0.38
LINC01227-203ENST00000562002 KCNK17Q96T54 332 aa17.43■□□□□ 0.38
LINC01227-203ENST00000562002 ZDHHC16Q969W1 377 aa17.41■□□□□ 0.38
LINC01227-203ENST00000562002 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
LINC01227-203ENST00000562002 ADGRD1Q6QNK2 874 aa17.4■□□□□ 0.38
LINC01227-203ENST00000562002 PCDHGA10Q9Y5H3 936 aa17.4■□□□□ 0.38
LINC01227-203ENST00000562002 ADAM33Q9BZ11 813 aa17.39■□□□□ 0.37
LINC01227-203ENST00000562002 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
LINC01227-203ENST00000562002 TK2O00142 265 aa17.37■□□□□ 0.37
LINC01227-203ENST00000562002 PDIA6Q15084 440 aa17.37■□□□□ 0.37
LINC01227-203ENST00000562002 RNF166Q96A37 237 aaPredicted RBP17.37■□□□□ 0.37
LINC01227-203ENST00000562002 ARIH1Q9Y4X5 557 aaPredicted RBP17.37■□□□□ 0.37
LINC01227-203ENST00000562002 PHF14O94880 888 aa17.36■□□□□ 0.37
LINC01227-203ENST00000562002 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
LINC01227-203ENST00000562002 PTPREP23469 700 aa17.34■□□□□ 0.37
LINC01227-203ENST00000562002 TYW1BQ6NUM6 668 aa17.31■□□□□ 0.36
LINC01227-203ENST00000562002 SPDYE16A6NNV3 312 aaPredicted RBP17.3■□□□□ 0.36
LINC01227-203ENST00000562002 HRO43593 1189 aa17.3■□□□□ 0.36
LINC01227-203ENST00000562002 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
LINC01227-203ENST00000562002 EPAS1Q99814 870 aa17.28■□□□□ 0.36
LINC01227-203ENST00000562002 DDX12PQ92771 950 aa17.27■□□□□ 0.36
LINC01227-203ENST00000562002 SLC4A5Q9BY07 1137 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms