RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CHGAP10645 457 aaKnown RBP6.97□□□□□ -1.29
CHD9-204ENST00000561869 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
CHD9-204ENST00000561869 HS3ST6Q96QI5 342 aa6.97□□□□□ -1.29
CHD9-204ENST00000561869 MFRPQ9BY79 579 aa6.96□□□□□ -1.3
CHD9-204ENST00000561869 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
CHD9-204ENST00000561869 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
CHD9-204ENST00000561869 DNAJC5Q9H3Z4 198 aa6.96□□□□□ -1.3
CHD9-204ENST00000561869 MMRN1Q13201 1228 aa6.95□□□□□ -1.3
CHD9-204ENST00000561869 HOXB1P14653 301 aaPredicted RBP6.93□□□□□ -1.3
CHD9-204ENST00000561869 NLRP6P59044 892 aa6.93□□□□□ -1.3
CHD9-204ENST00000561869 NKX1-1Q15270 411 aaPredicted RBP6.93□□□□□ -1.3
CHD9-204ENST00000561869 DOK7Q18PE1 504 aa6.91□□□□□ -1.3
CHD9-204ENST00000561869 ZNF710Q8N1W2 664 aa6.9□□□□□ -1.3
CHD9-204ENST00000561869 DCAF8L2P0C7V8 631 aa6.89□□□□□ -1.31
CHD9-204ENST00000561869 PPP1R37O75864 691 aa6.88□□□□□ -1.31
CHD9-204ENST00000561869 GPR153Q6NV75 609 aa6.86□□□□□ -1.31
CHD9-204ENST00000561869 ERBB3P21860 1342 aa6.85□□□□□ -1.31
CHD9-204ENST00000561869 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
CHD9-204ENST00000561869 RIMBP2O15034 1052 aa6.84□□□□□ -1.31
CHD9-204ENST00000561869 GTPBP6O43824 516 aaPredicted RBP6.84□□□□□ -1.31
CHD9-204ENST00000561869 KIF3CO14782 793 aa6.83□□□□□ -1.32
CHD9-204ENST00000561869 ARSIQ5FYB1 569 aa6.83□□□□□ -1.32
CHD9-204ENST00000561869 KHSRPQ92945 711 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHD9-204ENST00000561869 ZSWIM6Q9HCJ5 1215 aa6.83□□□□□ -1.32
CHD9-204ENST00000561869 BBXQ8WY36 941 aaPredicted RBP6.82□□□□□ -1.32
CHD9-204ENST00000561869 C2orf72A6NCS6 295 aa6.81□□□□□ -1.32
CHD9-204ENST00000561869 RYDENQ9NUL5 291 aaKnown RBP6.79□□□□□ -1.32
CHD9-204ENST00000561869 ZNF687Q8N1G0 1237 aa6.78□□□□□ -1.32
CHD9-204ENST00000561869 ZNF316A6NFI3 1004 aaPredicted RBP6.76□□□□□ -1.33
CHD9-204ENST00000561869 NUDT7P0C024 238 aa6.74□□□□□ -1.33
CHD9-204ENST00000561869 TMC2Q8TDI7 906 aa6.72□□□□□ -1.33
CHD9-204ENST00000561869 PCDHGA4Q9Y5G9 962 aa6.72□□□□□ -1.33
CHD9-204ENST00000561869 SLC34A2O95436 690 aa6.71□□□□□ -1.34
CHD9-204ENST00000561869 POTEEQ6S8J3 1075 aa6.71□□□□□ -1.34
CHD9-204ENST00000561869 SPRYD3Q8NCJ5 442 aa6.71□□□□□ -1.34
CHD9-204ENST00000561869 RNF166Q96A37 237 aaPredicted RBP6.71□□□□□ -1.34
CHD9-204ENST00000561869 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.71□□□□□ -1.34
CHD9-204ENST00000561869 LHX6Q9UPM6 363 aa6.71□□□□□ -1.34
CHD9-204ENST00000561869 CADPS2Q86UW7 1296 aa6.7□□□□□ -1.34
CHD9-204ENST00000561869 CRISPLD2Q9H0B8 497 aa6.7□□□□□ -1.34
CHD9-204ENST00000561869 GPHNQ9NQX3 736 aaPredicted RBP6.7□□□□□ -1.34
CHD9-204ENST00000561869 MYT1LQ9UL68 1186 aa6.7□□□□□ -1.34
CHD9-204ENST00000561869 ANKRD13DQ6ZTN6 518 aa6.69□□□□□ -1.34
CHD9-204ENST00000561869 PAXIP1Q6ZW49 1069 aaPredicted RBP6.69□□□□□ -1.34
CHD9-204ENST00000561869 NCKAP5LQ9HCH0 1330 aa6.69□□□□□ -1.34
CHD9-204ENST00000561869 LSM11P83369 360 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD9-204ENST00000561869 AXIN2Q9Y2T1 843 aa6.68□□□□□ -1.34
CHD9-204ENST00000561869 KDM4FA0A1W2PPD8 638 aa6.67□□□□□ -1.34
CHD9-204ENST00000561869 FOXK1P85037 733 aa6.67□□□□□ -1.34
CHD9-204ENST00000561869 CFAP44Q96MT7 982 aa6.67□□□□□ -1.34
CHD9-204ENST00000561869 DSG2Q14126 1118 aa6.66□□□□□ -1.34
CHD9-204ENST00000561869 PLPP6Q8IY26 295 aa6.65□□□□□ -1.34
CHD9-204ENST00000561869 PDE4AP27815 886 aa6.64□□□□□ -1.35
CHD9-204ENST00000561869 MFSD10Q14728 455 aa6.64□□□□□ -1.35
CHD9-204ENST00000561869 PTCD2Q8WV60 388 aaKnown RBP6.64□□□□□ -1.35
CHD9-204ENST00000561869 PBX2P40425 430 aa6.63□□□□□ -1.35
CHD9-204ENST00000561869 PTGER2P43116 358 aa6.62□□□□□ -1.35
CHD9-204ENST00000561869 LARP6Q9BRS8 491 aaKnown RBP6.62□□□□□ -1.35
CHD9-204ENST00000561869 PPP1R15BQ5SWA1 713 aa6.61□□□□□ -1.35
CHD9-204ENST00000561869 DMRTA1Q5VZB9 504 aa6.59□□□□□ -1.35
CHD9-204ENST00000561869 DDX27Q96GQ7 796 aaKnown RBP6.59□□□□□ -1.35
CHD9-204ENST00000561869 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
CHD9-204ENST00000561869 ARHGAP33O14559 1287 aa6.58□□□□□ -1.36
CHD9-204ENST00000561869 PSEN2P49810 448 aa6.58□□□□□ -1.36
CHD9-204ENST00000561869 PLCB2Q00722 1185 aa6.58□□□□□ -1.36
CHD9-204ENST00000561869 OXER1Q8TDS5 423 aa6.58□□□□□ -1.36
CHD9-204ENST00000561869 ADGRD1Q6QNK2 874 aa6.57□□□□□ -1.36
CHD9-204ENST00000561869 PSDA5PKW4 1024 aaPredicted RBP6.56□□□□□ -1.36
CHD9-204ENST00000561869 CAMK2BQ13554 666 aa6.56□□□□□ -1.36
CHD9-204ENST00000561869 UPF1Q92900 1129 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD9-204ENST00000561869 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
CHD9-204ENST00000561869 HRO43593 1189 aa6.54□□□□□ -1.36
CHD9-204ENST00000561869 PPP4R3BQ5MIZ7 849 aa6.53□□□□□ -1.36
CHD9-204ENST00000561869 TK2O00142 265 aa6.52□□□□□ -1.37
CHD9-204ENST00000561869 TBC1D12O60347 775 aa6.52□□□□□ -1.37
CHD9-204ENST00000561869 KCNK17Q96T54 332 aa6.52□□□□□ -1.37
CHD9-204ENST00000561869 ANO8Q9HCE9 1232 aaPredicted RBP6.5□□□□□ -1.37
CHD9-204ENST00000561869 FOSBP53539 338 aa6.49□□□□□ -1.37
CHD9-204ENST00000561869 ZNF454Q8N9F8 522 aa6.49□□□□□ -1.37
CHD9-204ENST00000561869 HCSTQ9UBK5 93 aa6.48□□□□□ -1.37
CHD9-204ENST00000561869 VPS9D1Q9Y2B5 631 aa6.48□□□□□ -1.37
CHD9-204ENST00000561869 EVI5O60447 810 aa6.47□□□□□ -1.37
CHD9-204ENST00000561869 MAP3K9P80192 1104 aa6.47□□□□□ -1.37
CHD9-204ENST00000561869 E2F4Q16254 413 aa6.47□□□□□ -1.37
CHD9-204ENST00000561869 BCL2L12Q9HB09 334 aa6.47□□□□□ -1.37
CHD9-204ENST00000561869 WDR70Q9NW82 654 aa6.47□□□□□ -1.37
CHD9-204ENST00000561869 ARIH1Q9Y4X5 557 aaPredicted RBP6.47□□□□□ -1.37
CHD9-204ENST00000561869 DPYSL4O14531 572 aa6.46□□□□□ -1.38
CHD9-204ENST00000561869 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.38
CHD9-204ENST00000561869 PLA2G2EQ9NZK7 142 aa6.46□□□□□ -1.38
CHD9-204ENST00000561869 ADAM33Q9BZ11 813 aa6.45□□□□□ -1.38
CHD9-204ENST00000561869 HAP1P54257 671 aaPredicted RBP6.44□□□□□ -1.38
CHD9-204ENST00000561869 JPH4Q96JJ6 628 aa6.44□□□□□ -1.38
CHD9-204ENST00000561869 KDM2AQ9Y2K7 1162 aa6.44□□□□□ -1.38
CHD9-204ENST00000561869 ZBED2Q9BTP6 218 aa6.43□□□□□ -1.38
CHD9-204ENST00000561869 BHMG1C9JSJ3 638 aaPredicted RBP6.42□□□□□ -1.38
CHD9-204ENST00000561869 PDIA6Q15084 440 aa6.42□□□□□ -1.38
CHD9-204ENST00000561869 SLC4A5Q9BY07 1137 aa6.42□□□□□ -1.38
CHD9-204ENST00000561869 PTPREP23469 700 aa6.41□□□□□ -1.38
CHD9-204ENST00000561869 KCNV2Q8TDN2 545 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms