RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CEP170Q5SW79 1584 aa10.13□□□□□ -0.79
CAPN3-210ENST00000561817 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
CAPN3-210ENST00000561817 PCF11O94913 1555 aaKnown RBP10.12□□□□□ -0.79
CAPN3-210ENST00000561817 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
CAPN3-210ENST00000561817 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-210ENST00000561817 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
CAPN3-210ENST00000561817 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
CAPN3-210ENST00000561817 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-210ENST00000561817 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
CAPN3-210ENST00000561817 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 DISP1Q96F81 1524 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 RIMBP3CA6NJZ7 1639 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 RIMBP3BA6NNM3 1639 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 RIMBP3Q9UFD9 1639 aa10.09□□□□□ -0.79
CAPN3-210ENST00000561817 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-210ENST00000561817 FMN1Q68DA7 1419 aa10.08□□□□□ -0.8
CAPN3-210ENST00000561817 LRRIQ1Q96JM4 1722 aa10.06□□□□□ -0.8
CAPN3-210ENST00000561817 KIAA0556O60303 1618 aa10.06□□□□□ -0.8
CAPN3-210ENST00000561817 TTBK1Q5TCY1 1321 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-210ENST00000561817 LRRC9Q6ZRR7 1453 aa10.05□□□□□ -0.8
CAPN3-210ENST00000561817 DNAJC5Q9H3Z4 198 aa10.05□□□□□ -0.8
CAPN3-210ENST00000561817 HRCP23327 699 aa10.04□□□□□ -0.8
CAPN3-210ENST00000561817 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
CAPN3-210ENST00000561817 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
CAPN3-210ENST00000561817 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
CAPN3-210ENST00000561817 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
CAPN3-210ENST00000561817 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
CAPN3-210ENST00000561817 SHROOM2Q13796 1616 aa10.01□□□□□ -0.81
CAPN3-210ENST00000561817 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
CAPN3-210ENST00000561817 JPH4Q96JJ6 628 aa10□□□□□ -0.81
CAPN3-210ENST00000561817 LHX8Q68G74 356 aa9.99□□□□□ -0.81
CAPN3-210ENST00000561817 MAGI3Q5TCQ9 1506 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-210ENST00000561817 MIER1Q8N108 512 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
CAPN3-210ENST00000561817 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
CAPN3-210ENST00000561817 FKBP8Q14318 412 aa9.96□□□□□ -0.82
CAPN3-210ENST00000561817 NUP153P49790 1475 aaKnown RBP9.96□□□□□ -0.82
CAPN3-210ENST00000561817 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.82
CAPN3-210ENST00000561817 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
CAPN3-210ENST00000561817 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
CAPN3-210ENST00000561817 ABCA8O94911 1581 aa9.94□□□□□ -0.82
CAPN3-210ENST00000561817 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
CAPN3-210ENST00000561817 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
CAPN3-210ENST00000561817 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-210ENST00000561817 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-210ENST00000561817 PLB1Q6P1J6 1458 aa9.92□□□□□ -0.82
CAPN3-210ENST00000561817 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-210ENST00000561817 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
CAPN3-210ENST00000561817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.91□□□□□ -0.82
CAPN3-210ENST00000561817 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
CAPN3-210ENST00000561817 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
CAPN3-210ENST00000561817 MTUS2Q5JR59 1369 aa9.9□□□□□ -0.82
CAPN3-210ENST00000561817 CYB5RLQ6IPT4 315 aa9.89□□□□□ -0.83
CAPN3-210ENST00000561817 FGD6Q6ZV73 1430 aa9.89□□□□□ -0.83
CAPN3-210ENST00000561817 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-210ENST00000561817 PTPRGP23470 1445 aa9.87□□□□□ -0.83
CAPN3-210ENST00000561817 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
CAPN3-210ENST00000561817 ATP10BO94823 1461 aa9.86□□□□□ -0.83
CAPN3-210ENST00000561817 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
CAPN3-210ENST00000561817 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-210ENST00000561817 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
CAPN3-210ENST00000561817 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
CAPN3-210ENST00000561817 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-210ENST00000561817 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
CAPN3-210ENST00000561817 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-210ENST00000561817 UACAQ9BZF9 1416 aa9.83□□□□□ -0.84
CAPN3-210ENST00000561817 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 MIA2Q96PC5 1412 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 ARXQ96QS3 562 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
CAPN3-210ENST00000561817 UHRF1BP1LA0JNW5 1464 aa9.81□□□□□ -0.84
CAPN3-210ENST00000561817 KIF14Q15058 1648 aa9.81□□□□□ -0.84
CAPN3-210ENST00000561817 ABCC10Q5T3U5 1492 aa9.8□□□□□ -0.84
CAPN3-210ENST00000561817 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-210ENST00000561817 KIF12Q96FN5 646 aa9.8□□□□□ -0.84
CAPN3-210ENST00000561817 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
CAPN3-210ENST00000561817 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
CAPN3-210ENST00000561817 FAM50AQ14320 339 aaKnown RBP9.79□□□□□ -0.84
CAPN3-210ENST00000561817 CDK11AQ9UQ88 783 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-210ENST00000561817 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
CAPN3-210ENST00000561817 GPATCH8Q9UKJ3 1502 aaKnown RBP9.78□□□□□ -0.84
CAPN3-210ENST00000561817 ASTLQ6HA08 431 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-210ENST00000561817 SETD5Q9C0A6 1442 aa9.78□□□□□ -0.84
CAPN3-210ENST00000561817 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-210ENST00000561817 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
CAPN3-210ENST00000561817 KIF13AQ9H1H9 1805 aa9.77□□□□□ -0.85
CAPN3-210ENST00000561817 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.85
CAPN3-210ENST00000561817 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
CAPN3-210ENST00000561817 RAB3GAP2Q9H2M9 1393 aa9.76□□□□□ -0.85
CAPN3-210ENST00000561817 ITGAEP38570 1179 aa9.76□□□□□ -0.85
CAPN3-210ENST00000561817 MAP3K13O43283 966 aa9.75□□□□□ -0.85
CAPN3-210ENST00000561817 NUBP1P53384 320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms