RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
RPAP1-203ENST00000561631 TIAM1Q13009 1591 aa21■□□□□ 0.95
RPAP1-203ENST00000561631 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
RPAP1-203ENST00000561631 SUPT6HQ7KZ85 1726 aaKnown RBP20.96■□□□□ 0.95
RPAP1-203ENST00000561631 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
RPAP1-203ENST00000561631 ZMYM4Q5VZL5 1548 aa20.95■□□□□ 0.94
RPAP1-203ENST00000561631 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
RPAP1-203ENST00000561631 POGZQ7Z3K3 1410 aa20.94■□□□□ 0.94
RPAP1-203ENST00000561631 RAPGEF3O95398 923 aa20.92■□□□□ 0.94
RPAP1-203ENST00000561631 SCAPERQ9BY12 1400 aa20.92■□□□□ 0.94
RPAP1-203ENST00000561631 ABCC1P33527 1531 aa20.92■□□□□ 0.94
RPAP1-203ENST00000561631 ZFYVE16Q7Z3T8 1539 aa20.9■□□□□ 0.94
RPAP1-203ENST00000561631 ZNF518AQ6AHZ1 1483 aa20.9■□□□□ 0.94
RPAP1-203ENST00000561631 CCNB3Q8WWL7 1395 aa20.9■□□□□ 0.94
RPAP1-203ENST00000561631 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
RPAP1-203ENST00000561631 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
RPAP1-203ENST00000561631 HECW2Q9P2P5 1572 aa20.87■□□□□ 0.93
RPAP1-203ENST00000561631 SAMD9LQ8IVG5 1584 aa20.86■□□□□ 0.93
RPAP1-203ENST00000561631 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
RPAP1-203ENST00000561631 KDM5CP41229 1560 aa20.85■□□□□ 0.93
RPAP1-203ENST00000561631 MAGI2Q86UL8 1455 aa20.85■□□□□ 0.93
RPAP1-203ENST00000561631 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
RPAP1-203ENST00000561631 APLP2Q06481 763 aa20.84■□□□□ 0.93
RPAP1-203ENST00000561631 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.93
RPAP1-203ENST00000561631 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
RPAP1-203ENST00000561631 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
RPAP1-203ENST00000561631 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
RPAP1-203ENST00000561631 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
RPAP1-203ENST00000561631 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
RPAP1-203ENST00000561631 YEATS2Q9ULM3 1422 aa20.78■□□□□ 0.92
RPAP1-203ENST00000561631 BCORL1Q5H9F3 1711 aa20.76■□□□□ 0.91
RPAP1-203ENST00000561631 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
RPAP1-203ENST00000561631 ARID4BQ4LE39 1312 aaPredicted RBP20.75■□□□□ 0.91
RPAP1-203ENST00000561631 ABCA6Q8N139 1617 aa20.75■□□□□ 0.91
RPAP1-203ENST00000561631 C9orf84Q5VXU9 1444 aa20.74■□□□□ 0.91
RPAP1-203ENST00000561631 DIP2CQ9Y2E4 1556 aa20.74■□□□□ 0.91
RPAP1-203ENST00000561631 TRAPPC8Q9Y2L5 1435 aa20.73■□□□□ 0.91
RPAP1-203ENST00000561631 KDM4FA0A1W2PPD8 638 aa20.73■□□□□ 0.91
RPAP1-203ENST00000561631 KIAA1107Q9UPP5 1409 aa20.72■□□□□ 0.91
RPAP1-203ENST00000561631 CAMSAP2Q08AD1 1489 aa20.72■□□□□ 0.91
RPAP1-203ENST00000561631 MLH3Q9UHC1 1453 aa20.72■□□□□ 0.91
RPAP1-203ENST00000561631 KIDINS220Q9ULH0 1771 aa20.71■□□□□ 0.91
RPAP1-203ENST00000561631 INO80Q9ULG1 1556 aaPredicted RBP20.71■□□□□ 0.91
RPAP1-203ENST00000561631 ADAMTSL3P82987 1691 aa20.7■□□□□ 0.91
RPAP1-203ENST00000561631 ATP10AO60312 1499 aa20.7■□□□□ 0.9
RPAP1-203ENST00000561631 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
RPAP1-203ENST00000561631 SIGLEC1Q9BZZ2 1709 aa20.7■□□□□ 0.9
RPAP1-203ENST00000561631 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
RPAP1-203ENST00000561631 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
RPAP1-203ENST00000561631 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
RPAP1-203ENST00000561631 FER1L4A9Z1Z3 1794 aa20.67■□□□□ 0.9
RPAP1-203ENST00000561631 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
RPAP1-203ENST00000561631 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
RPAP1-203ENST00000561631 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
RPAP1-203ENST00000561631 CCDC141Q6ZP82 1450 aa20.65■□□□□ 0.9
RPAP1-203ENST00000561631 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
RPAP1-203ENST00000561631 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.89
RPAP1-203ENST00000561631 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.89
RPAP1-203ENST00000561631 ARHGEF5Q12774 1597 aa20.63■□□□□ 0.89
RPAP1-203ENST00000561631 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
RPAP1-203ENST00000561631 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
RPAP1-203ENST00000561631 MBD5Q9P267 1494 aa20.6■□□□□ 0.89
RPAP1-203ENST00000561631 PTPN23Q9H3S7 1636 aa20.59■□□□□ 0.89
RPAP1-203ENST00000561631 AGLP35573 1532 aa20.58■□□□□ 0.88
RPAP1-203ENST00000561631 CROCC2H7BZ55 1655 aa20.57■□□□□ 0.88
RPAP1-203ENST00000561631 PTPRMP28827 1452 aa20.56■□□□□ 0.88
RPAP1-203ENST00000561631 PLXNC1O60486 1568 aa20.55■□□□□ 0.88
RPAP1-203ENST00000561631 MLECQ14165 292 aa20.55■□□□□ 0.88
RPAP1-203ENST00000561631 RTEL1-TNFRSF6BF6WH68 1400 aa20.54■□□□□ 0.88
RPAP1-203ENST00000561631 A2MP01023 1474 aa20.54■□□□□ 0.88
RPAP1-203ENST00000561631 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
RPAP1-203ENST00000561631 RSPH4AQ5TD94 716 aa20.53■□□□□ 0.88
RPAP1-203ENST00000561631 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.88
RPAP1-203ENST00000561631 DNMT1P26358 1616 aaKnown RBP20.49■□□□□ 0.87
RPAP1-203ENST00000561631 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
RPAP1-203ENST00000561631 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
RPAP1-203ENST00000561631 TCOF1Q13428 1488 aaKnown RBP20.48■□□□□ 0.87
RPAP1-203ENST00000561631 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
RPAP1-203ENST00000561631 SHANK2Q9UPX8 1470 aa20.47■□□□□ 0.87
RPAP1-203ENST00000561631 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
RPAP1-203ENST00000561631 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
RPAP1-203ENST00000561631 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
RPAP1-203ENST00000561631 C3P01024 1663 aa20.42■□□□□ 0.86
RPAP1-203ENST00000561631 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
RPAP1-203ENST00000561631 DAPK1P53355 1430 aa20.42■□□□□ 0.86
RPAP1-203ENST00000561631 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
RPAP1-203ENST00000561631 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
RPAP1-203ENST00000561631 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
RPAP1-203ENST00000561631 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
RPAP1-203ENST00000561631 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
RPAP1-203ENST00000561631 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
RPAP1-203ENST00000561631 ABCC5O15440 1437 aa20.36■□□□□ 0.85
RPAP1-203ENST00000561631 RNF17Q9BXT8 1623 aaKnown RBP20.36■□□□□ 0.85
RPAP1-203ENST00000561631 KDM5DQ9BY66 1539 aa20.35■□□□□ 0.85
RPAP1-203ENST00000561631 GGT6Q6P531 493 aa20.34■□□□□ 0.85
RPAP1-203ENST00000561631 ZC3H13Q5T200 1668 aaKnown RBP20.34■□□□□ 0.85
RPAP1-203ENST00000561631 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
RPAP1-203ENST00000561631 KIF3BO15066 747 aa20.32■□□□□ 0.84
RPAP1-203ENST00000561631 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
RPAP1-203ENST00000561631 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms