RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 RAPGEF3O95398 923 aa27.13■■□□□ 1.93
KNSTRN-213ENST00000561169 ADGRL1O94910 1474 aa27.12■■□□□ 1.93
KNSTRN-213ENST00000561169 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
KNSTRN-213ENST00000561169 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
KNSTRN-213ENST00000561169 DENND4BO75064 1496 aaPredicted RBP27.1■■□□□ 1.93
KNSTRN-213ENST00000561169 SUPT6HQ7KZ85 1726 aaKnown RBP27.09■■□□□ 1.93
KNSTRN-213ENST00000561169 EFCAB2Q5VUJ9 269 aa27.09■■□□□ 1.93
KNSTRN-213ENST00000561169 LRRC9Q6ZRR7 1453 aa27.08■■□□□ 1.93
KNSTRN-213ENST00000561169 SCAPERQ9BY12 1400 aa27.06■■□□□ 1.92
KNSTRN-213ENST00000561169 ABCC1P33527 1531 aa27.05■■□□□ 1.92
KNSTRN-213ENST00000561169 POGZQ7Z3K3 1410 aa27.05■■□□□ 1.92
KNSTRN-213ENST00000561169 SAMD9LQ8IVG5 1584 aa27.05■■□□□ 1.92
KNSTRN-213ENST00000561169 NCOA2Q15596 1464 aa27.04■■□□□ 1.92
KNSTRN-213ENST00000561169 ITSN2Q9NZM3 1697 aa27.04■■□□□ 1.92
KNSTRN-213ENST00000561169 KANK4Q5T7N3 995 aaPredicted RBP27.04■■□□□ 1.92
KNSTRN-213ENST00000561169 ZMYM4Q5VZL5 1548 aa27.03■■□□□ 1.92
KNSTRN-213ENST00000561169 ARHGEF12Q9NZN5 1544 aa27.03■■□□□ 1.92
KNSTRN-213ENST00000561169 CCNB3Q8WWL7 1395 aa27.02■■□□□ 1.92
KNSTRN-213ENST00000561169 ARHGEF40Q8TER5 1519 aa26.99■■□□□ 1.91
KNSTRN-213ENST00000561169 KDM5CP41229 1560 aa26.96■■□□□ 1.91
KNSTRN-213ENST00000561169 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
KNSTRN-213ENST00000561169 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.9
KNSTRN-213ENST00000561169 YEATS2Q9ULM3 1422 aa26.94■■□□□ 1.9
KNSTRN-213ENST00000561169 ZNF518AQ6AHZ1 1483 aa26.92■■□□□ 1.9
KNSTRN-213ENST00000561169 SIGLEC1Q9BZZ2 1709 aa26.92■■□□□ 1.9
KNSTRN-213ENST00000561169 CFDP1Q9UEE9 299 aaPredicted RBP26.92■■□□□ 1.9
KNSTRN-213ENST00000561169 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
KNSTRN-213ENST00000561169 ZFYVE16Q7Z3T8 1539 aa26.92■■□□□ 1.9
KNSTRN-213ENST00000561169 AFAP1Q8N556 730 aa26.9■■□□□ 1.9
KNSTRN-213ENST00000561169 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.9
KNSTRN-213ENST00000561169 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
KNSTRN-213ENST00000561169 MAGI2Q86UL8 1455 aa26.87■■□□□ 1.89
KNSTRN-213ENST00000561169 KDM4FA0A1W2PPD8 638 aa26.86■■□□□ 1.89
KNSTRN-213ENST00000561169 APLP2Q06481 763 aa26.86■■□□□ 1.89
KNSTRN-213ENST00000561169 KIDINS220Q9ULH0 1771 aa26.85■■□□□ 1.89
KNSTRN-213ENST00000561169 KIAA1107Q9UPP5 1409 aa26.85■■□□□ 1.89
KNSTRN-213ENST00000561169 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
KNSTRN-213ENST00000561169 ABCA6Q8N139 1617 aa26.84■■□□□ 1.89
KNSTRN-213ENST00000561169 CAMSAP2Q08AD1 1489 aa26.84■■□□□ 1.89
KNSTRN-213ENST00000561169 HNRNPMP52272 730 aaKnown RBP eCLIP26.83■■□□□ 1.88
KNSTRN-213ENST00000561169 DIP2CQ9Y2E4 1556 aa26.82■■□□□ 1.88
KNSTRN-213ENST00000561169 MBD5Q9P267 1494 aa26.81■■□□□ 1.88
KNSTRN-213ENST00000561169 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
KNSTRN-213ENST00000561169 MLH3Q9UHC1 1453 aa26.8■■□□□ 1.88
KNSTRN-213ENST00000561169 INO80Q9ULG1 1556 aaPredicted RBP26.78■■□□□ 1.88
KNSTRN-213ENST00000561169 BCORL1Q5H9F3 1711 aa26.77■■□□□ 1.88
KNSTRN-213ENST00000561169 ATP10AO60312 1499 aa26.76■■□□□ 1.87
KNSTRN-213ENST00000561169 ADAMTSL3P82987 1691 aa26.74■■□□□ 1.87
KNSTRN-213ENST00000561169 ATP7AQ04656 1500 aa26.73■■□□□ 1.87
KNSTRN-213ENST00000561169 C9orf84Q5VXU9 1444 aa26.72■■□□□ 1.87
KNSTRN-213ENST00000561169 MIA2Q96PC5 1412 aa26.72■■□□□ 1.87
KNSTRN-213ENST00000561169 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
KNSTRN-213ENST00000561169 REREQ9P2R6 1566 aa26.7■■□□□ 1.86
KNSTRN-213ENST00000561169 PTPN23Q9H3S7 1636 aa26.69■■□□□ 1.86
KNSTRN-213ENST00000561169 CCDC141Q6ZP82 1450 aa26.69■■□□□ 1.86
KNSTRN-213ENST00000561169 SPAG9O60271 1321 aaKnown RBP26.69■■□□□ 1.86
KNSTRN-213ENST00000561169 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
KNSTRN-213ENST00000561169 FGD6Q6ZV73 1430 aa26.67■■□□□ 1.86
KNSTRN-213ENST00000561169 MADDQ8WXG6 1647 aa26.67■■□□□ 1.86
KNSTRN-213ENST00000561169 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
KNSTRN-213ENST00000561169 ADGBQ8N7X0 1667 aa26.65■■□□□ 1.86
KNSTRN-213ENST00000561169 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
KNSTRN-213ENST00000561169 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
KNSTRN-213ENST00000561169 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
KNSTRN-213ENST00000561169 CROCC2H7BZ55 1655 aa26.61■■□□□ 1.85
KNSTRN-213ENST00000561169 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
KNSTRN-213ENST00000561169 FER1L4A9Z1Z3 1794 aa26.6■■□□□ 1.85
KNSTRN-213ENST00000561169 RIMS1Q86UR5 1692 aaKnown RBP26.6■■□□□ 1.85
KNSTRN-213ENST00000561169 AGLP35573 1532 aa26.59■■□□□ 1.85
KNSTRN-213ENST00000561169 RTEL1-TNFRSF6BF6WH68 1400 aa26.58■■□□□ 1.85
KNSTRN-213ENST00000561169 MAST1Q9Y2H9 1570 aa26.57■■□□□ 1.84
KNSTRN-213ENST00000561169 MLECQ14165 292 aa26.56■■□□□ 1.84
KNSTRN-213ENST00000561169 DNMT1P26358 1616 aaKnown RBP26.56■■□□□ 1.84
KNSTRN-213ENST00000561169 A2MP01023 1474 aa26.55■■□□□ 1.84
KNSTRN-213ENST00000561169 RSPH4AQ5TD94 716 aa26.53■■□□□ 1.84
KNSTRN-213ENST00000561169 ABCC5O15440 1437 aa26.52■■□□□ 1.84
KNSTRN-213ENST00000561169 PTPRMP28827 1452 aa26.52■■□□□ 1.84
KNSTRN-213ENST00000561169 DAPK1P53355 1430 aa26.49■■□□□ 1.83
KNSTRN-213ENST00000561169 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
KNSTRN-213ENST00000561169 TSPY4P0CV99 314 aa26.45■■□□□ 1.82
KNSTRN-213ENST00000561169 TSPY10P0CW01 314 aa26.45■■□□□ 1.82
KNSTRN-213ENST00000561169 DHX29Q7Z478 1369 aaKnown RBP26.43■■□□□ 1.82
KNSTRN-213ENST00000561169 FAM50AQ14320 339 aaKnown RBP26.42■■□□□ 1.82
KNSTRN-213ENST00000561169 C3P01024 1663 aa26.37■■□□□ 1.81
KNSTRN-213ENST00000561169 CLTCQ00610 1675 aaKnown RBP26.36■■□□□ 1.81
KNSTRN-213ENST00000561169 PTPRKQ15262 1439 aa26.36■■□□□ 1.81
KNSTRN-213ENST00000561169 EIF2AK4Q9P2K8 1649 aaKnown RBP26.34■■□□□ 1.81
KNSTRN-213ENST00000561169 KIF15Q9NS87 1388 aa26.34■■□□□ 1.81
KNSTRN-213ENST00000561169 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
KNSTRN-213ENST00000561169 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
KNSTRN-213ENST00000561169 RNF17Q9BXT8 1623 aaKnown RBP26.33■■□□□ 1.81
KNSTRN-213ENST00000561169 MROH2AA6NES4 1674 aa26.33■■□□□ 1.81
KNSTRN-213ENST00000561169 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
KNSTRN-213ENST00000561169 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
KNSTRN-213ENST00000561169 RRBP1Q9P2E9 1410 aaKnown RBP26.31■■□□□ 1.8
KNSTRN-213ENST00000561169 MROH1Q8NDA8 1641 aa26.31■■□□□ 1.8
KNSTRN-213ENST00000561169 KIF3BO15066 747 aa26.31■■□□□ 1.8
KNSTRN-213ENST00000561169 GGT6Q6P531 493 aa26.31■■□□□ 1.8
KNSTRN-213ENST00000561169 CEBPAP49715 358 aaPredicted RBP26.3■■□□□ 1.8
KNSTRN-213ENST00000561169 NCOA1Q15788 1441 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms