RNA–Protein interactions for RNA: ENST00000561164.1

MARK3-224, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-224ENST00000561164 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
MARK3-224ENST00000561164 C7P10643 843 aa13.58□□□□□ -0.24
MARK3-224ENST00000561164 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
MARK3-224ENST00000561164 COLQQ9Y215 455 aaPredicted RBP13.58□□□□□ -0.24
MARK3-224ENST00000561164 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
MARK3-224ENST00000561164 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
MARK3-224ENST00000561164 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
MARK3-224ENST00000561164 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
MARK3-224ENST00000561164 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
MARK3-224ENST00000561164 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
MARK3-224ENST00000561164 PPP1R15BQ5SWA1 713 aa13.52□□□□□ -0.25
MARK3-224ENST00000561164 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
MARK3-224ENST00000561164 CAMK2BQ13554 666 aa13.48□□□□□ -0.25
MARK3-224ENST00000561164 DSG2Q14126 1118 aa13.47□□□□□ -0.25
MARK3-224ENST00000561164 TPRNQ4KMQ1 711 aa13.47□□□□□ -0.25
MARK3-224ENST00000561164 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
MARK3-224ENST00000561164 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
MARK3-224ENST00000561164 FOXK1P85037 733 aa13.44□□□□□ -0.26
MARK3-224ENST00000561164 KIF3CO14782 793 aa13.42□□□□□ -0.26
MARK3-224ENST00000561164 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
MARK3-224ENST00000561164 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
MARK3-224ENST00000561164 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
MARK3-224ENST00000561164 TMEM92Q6UXU6 159 aa13.39□□□□□ -0.27
MARK3-224ENST00000561164 TULP1O00294 542 aaPredicted RBP13.37□□□□□ -0.27
MARK3-224ENST00000561164 SEMA3EO15041 775 aa13.36□□□□□ -0.27
MARK3-224ENST00000561164 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
MARK3-224ENST00000561164 DPYSL4O14531 572 aa13.33□□□□□ -0.28
MARK3-224ENST00000561164 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
MARK3-224ENST00000561164 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
MARK3-224ENST00000561164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
MARK3-224ENST00000561164 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
MARK3-224ENST00000561164 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
MARK3-224ENST00000561164 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
MARK3-224ENST00000561164 PDIA6Q15084 440 aa13.25□□□□□ -0.29
MARK3-224ENST00000561164 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
MARK3-224ENST00000561164 MAP3K9P80192 1104 aa13.24□□□□□ -0.29
MARK3-224ENST00000561164 OXER1Q8TDS5 423 aa13.21□□□□□ -0.29
MARK3-224ENST00000561164 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
MARK3-224ENST00000561164 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
MARK3-224ENST00000561164 TBC1D12O60347 775 aa13.15□□□□□ -0.3
MARK3-224ENST00000561164 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
MARK3-224ENST00000561164 SLC34A2O95436 690 aa13.14□□□□□ -0.31
MARK3-224ENST00000561164 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
MARK3-224ENST00000561164 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
MARK3-224ENST00000561164 MAMSTRQ6ZN01 415 aa13.11□□□□□ -0.31
MARK3-224ENST00000561164 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
MARK3-224ENST00000561164 EVI5O60447 810 aa13.1□□□□□ -0.31
MARK3-224ENST00000561164 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
MARK3-224ENST00000561164 GRXCR2A6NFK2 248 aa13.09□□□□□ -0.31
MARK3-224ENST00000561164 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
MARK3-224ENST00000561164 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
MARK3-224ENST00000561164 PTGER2P43116 358 aa13.06□□□□□ -0.32
MARK3-224ENST00000561164 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
MARK3-224ENST00000561164 DDX12PQ92771 950 aa13.04□□□□□ -0.32
MARK3-224ENST00000561164 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
MARK3-224ENST00000561164 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
MARK3-224ENST00000561164 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
MARK3-224ENST00000561164 ZMYND10O75800 440 aa12.99□□□□□ -0.33
MARK3-224ENST00000561164 OSBPP22059 807 aa12.99□□□□□ -0.33
MARK3-224ENST00000561164 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
MARK3-224ENST00000561164 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
MARK3-224ENST00000561164 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
MARK3-224ENST00000561164 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
MARK3-224ENST00000561164 PHF14O94880 888 aa12.93□□□□□ -0.34
MARK3-224ENST00000561164 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
MARK3-224ENST00000561164 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
MARK3-224ENST00000561164 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
MARK3-224ENST00000561164 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
MARK3-224ENST00000561164 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
MARK3-224ENST00000561164 EPAS1Q99814 870 aa12.91□□□□□ -0.34
MARK3-224ENST00000561164 NUDT7P0C024 238 aa12.9□□□□□ -0.34
MARK3-224ENST00000561164 SNPHO15079 494 aa12.89□□□□□ -0.35
MARK3-224ENST00000561164 GPR37O15354 613 aa12.89□□□□□ -0.35
MARK3-224ENST00000561164 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
MARK3-224ENST00000561164 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■□□□□ 9.2
MARK3-224ENST00000561164 GPR153Q6NV75 609 aa12.88□□□□□ -0.35
MARK3-224ENST00000561164 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
MARK3-224ENST00000561164 JPH4Q96JJ6 628 aa12.88□□□□□ -0.35
MARK3-224ENST00000561164 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
MARK3-224ENST00000561164 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
MARK3-224ENST00000561164 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
MARK3-224ENST00000561164 MAP3K7O43318 606 aa12.86□□□□□ -0.35
MARK3-224ENST00000561164 FCHSD2O94868 740 aa12.86□□□□□ -0.35
MARK3-224ENST00000561164 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
MARK3-224ENST00000561164 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
MARK3-224ENST00000561164 FOSBP53539 338 aa12.84□□□□□ -0.35
MARK3-224ENST00000561164 LHX8Q68G74 356 aa12.84□□□□□ -0.35
MARK3-224ENST00000561164 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
MARK3-224ENST00000561164 HIC1Q14526 733 aa12.83□□□□□ -0.36
MARK3-224ENST00000561164 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
MARK3-224ENST00000561164 GNPATO15228 680 aa12.82□□□□□ -0.36
MARK3-224ENST00000561164 AK7Q96M32 723 aa12.82□□□□□ -0.36
MARK3-224ENST00000561164 PTGDRQ13258 359 aa12.81□□□□□ -0.36
MARK3-224ENST00000561164 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
MARK3-224ENST00000561164 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
MARK3-224ENST00000561164 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
MARK3-224ENST00000561164 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
MARK3-224ENST00000561164 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
MARK3-224ENST00000561164 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
MARK3-224ENST00000561164 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms