RNA–Protein interactions for RNA: ENST00000560913.1

PPP1R3E-206, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-206ENST00000560913 TROQ12816 1431 aaPredicted RBP28.14■■■□□ 2.1
PPP1R3E-206ENST00000560913 PCF11O94913 1555 aaKnown RBP28.13■■■□□ 2.09
PPP1R3E-206ENST00000560913 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
PPP1R3E-206ENST00000560913 PIAS4Q8N2W9 510 aaPredicted RBP28.1■■■□□ 2.09
PPP1R3E-206ENST00000560913 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
PPP1R3E-206ENST00000560913 POGZQ7Z3K3 1410 aa28.07■■■□□ 2.08
PPP1R3E-206ENST00000560913 PTPRMP28827 1452 aa28.07■■■□□ 2.08
PPP1R3E-206ENST00000560913 SIGLEC1Q9BZZ2 1709 aa28.06■■■□□ 2.08
PPP1R3E-206ENST00000560913 MAGI2Q86UL8 1455 aa28.06■■■□□ 2.08
PPP1R3E-206ENST00000560913 ZFYVE16Q7Z3T8 1539 aa28.06■■■□□ 2.08
PPP1R3E-206ENST00000560913 MADDQ8WXG6 1647 aa28.05■■■□□ 2.08
PPP1R3E-206ENST00000560913 YEATS2Q9ULM3 1422 aa28.05■■■□□ 2.08
PPP1R3E-206ENST00000560913 CCDC18Q5T9S5 1454 aa28.04■■■□□ 2.08
PPP1R3E-206ENST00000560913 CLIP1P30622 1438 aa28.04■■■□□ 2.08
PPP1R3E-206ENST00000560913 EFCAB2Q5VUJ9 269 aa28.03■■■□□ 2.08
PPP1R3E-206ENST00000560913 CDC42BPBQ9Y5S2 1711 aa28.01■■■□□ 2.07
PPP1R3E-206ENST00000560913 FYCO1Q9BQS8 1478 aa28.01■■■□□ 2.07
PPP1R3E-206ENST00000560913 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
PPP1R3E-206ENST00000560913 ARHGAP5Q13017 1502 aa27.98■■■□□ 2.07
PPP1R3E-206ENST00000560913 MSH5O43196 834 aa27.96■■■□□ 2.07
PPP1R3E-206ENST00000560913 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
PPP1R3E-206ENST00000560913 RIMS1Q86UR5 1692 aaKnown RBP27.94■■■□□ 2.06
PPP1R3E-206ENST00000560913 KDM5CP41229 1560 aa27.93■■■□□ 2.06
PPP1R3E-206ENST00000560913 ZNF518AQ6AHZ1 1483 aa27.91■■■□□ 2.06
PPP1R3E-206ENST00000560913 CDC42BPAQ5VT25 1732 aa27.91■■■□□ 2.06
PPP1R3E-206ENST00000560913 ATP10AO60312 1499 aa27.89■■■□□ 2.06
PPP1R3E-206ENST00000560913 ABCC1P33527 1531 aa27.87■■■□□ 2.05
PPP1R3E-206ENST00000560913 AFAP1Q8N556 730 aa27.86■■■□□ 2.05
PPP1R3E-206ENST00000560913 ARHGEF12Q9NZN5 1544 aa27.86■■■□□ 2.05
PPP1R3E-206ENST00000560913 C9orf84Q5VXU9 1444 aa27.85■■■□□ 2.05
PPP1R3E-206ENST00000560913 ITSN2Q9NZM3 1697 aa27.84■■■□□ 2.05
PPP1R3E-206ENST00000560913 FER1L4A9Z1Z3 1794 aa27.83■■■□□ 2.05
PPP1R3E-206ENST00000560913 DIP2CQ9Y2E4 1556 aa27.82■■■□□ 2.04
PPP1R3E-206ENST00000560913 TRAPPC8Q9Y2L5 1435 aa27.81■■■□□ 2.04
PPP1R3E-206ENST00000560913 MLH3Q9UHC1 1453 aa27.8■■■□□ 2.04
PPP1R3E-206ENST00000560913 LMTK3Q96Q04 1460 aa27.79■■■□□ 2.04
PPP1R3E-206ENST00000560913 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
PPP1R3E-206ENST00000560913 REREQ9P2R6 1566 aa27.78■■■□□ 2.04
PPP1R3E-206ENST00000560913 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
PPP1R3E-206ENST00000560913 MLECQ14165 292 aa27.77■■■□□ 2.04
PPP1R3E-206ENST00000560913 SAMD9LQ8IVG5 1584 aa27.76■■■□□ 2.03
PPP1R3E-206ENST00000560913 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
PPP1R3E-206ENST00000560913 KIDINS220Q9ULH0 1771 aa27.73■■■□□ 2.03
PPP1R3E-206ENST00000560913 ILDR1Q86SU0 546 aaPredicted RBP27.69■■■□□ 2.02
PPP1R3E-206ENST00000560913 AGLP35573 1532 aa27.67■■■□□ 2.02
PPP1R3E-206ENST00000560913 SYCP2Q9BX26 1530 aa27.67■■■□□ 2.02
PPP1R3E-206ENST00000560913 MTUS2Q5JR59 1369 aa27.66■■■□□ 2.02
PPP1R3E-206ENST00000560913 MYT1LQ9UL68 1186 aa27.65■■■□□ 2.02
PPP1R3E-206ENST00000560913 ZNF777Q9ULD5 760 aaPredicted RBP27.64■■■□□ 2.02
PPP1R3E-206ENST00000560913 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
PPP1R3E-206ENST00000560913 KIAA1107Q9UPP5 1409 aa27.63■■■□□ 2.01
PPP1R3E-206ENST00000560913 CCNB3Q8WWL7 1395 aa27.62■■■□□ 2.01
PPP1R3E-206ENST00000560913 TIAM1Q13009 1591 aa27.62■■■□□ 2.01
PPP1R3E-206ENST00000560913 CFDP1Q9UEE9 299 aaPredicted RBP27.6■■■□□ 2.01
PPP1R3E-206ENST00000560913 PLEKHH2Q8IVE3 1493 aa27.59■■■□□ 2.01
PPP1R3E-206ENST00000560913 HNRNPMP52272 730 aaKnown RBP eCLIP27.59■■■□□ 2.01
PPP1R3E-206ENST00000560913 HSPA2P54652 639 aa27.58■■■□□ 2.01
PPP1R3E-206ENST00000560913 PREX1Q8TCU6 1659 aa27.58■■■□□ 2.01
PPP1R3E-206ENST00000560913 CEBPAP49715 358 aaPredicted RBP27.57■■■□□ 2
PPP1R3E-206ENST00000560913 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
PPP1R3E-206ENST00000560913 ATP7AQ04656 1500 aa27.55■■■□□ 2
PPP1R3E-206ENST00000560913 C3P01024 1663 aa27.55■■■□□ 2
PPP1R3E-206ENST00000560913 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
PPP1R3E-206ENST00000560913 SPAG9O60271 1321 aaKnown RBP27.54■■■□□ 2
PPP1R3E-206ENST00000560913 SETD1BQ9UPS6 1966 aaKnown RBP27.51■■■□□ 2
PPP1R3E-206ENST00000560913 ZNF644Q9H582 1327 aaPredicted RBP27.5■■□□□ 1.99
PPP1R3E-206ENST00000560913 PLXNC1O60486 1568 aa27.5■■□□□ 1.99
PPP1R3E-206ENST00000560913 MBD5Q9P267 1494 aa27.5■■□□□ 1.99
PPP1R3E-206ENST00000560913 SUPT6HQ7KZ85 1726 aaKnown RBP27.49■■□□□ 1.99
PPP1R3E-206ENST00000560913 NCOA2Q15596 1464 aa27.47■■□□□ 1.99
PPP1R3E-206ENST00000560913 VPS8Q8N3P4 1428 aa27.46■■□□□ 1.99
PPP1R3E-206ENST00000560913 A2MP01023 1474 aa27.44■■□□□ 1.98
PPP1R3E-206ENST00000560913 MROH2AA6NES4 1674 aa27.43■■□□□ 1.98
PPP1R3E-206ENST00000560913 CNTLNQ9NXG0 1405 aa27.43■■□□□ 1.98
PPP1R3E-206ENST00000560913 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
PPP1R3E-206ENST00000560913 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
PPP1R3E-206ENST00000560913 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
PPP1R3E-206ENST00000560913 ESF1Q9H501 851 aaKnown RBP27.38■■□□□ 1.97
PPP1R3E-206ENST00000560913 RTEL1-TNFRSF6BF6WH68 1400 aa27.38■■□□□ 1.97
PPP1R3E-206ENST00000560913 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
PPP1R3E-206ENST00000560913 CAMSAP2Q08AD1 1489 aa27.37■■□□□ 1.97
PPP1R3E-206ENST00000560913 FBXO41Q8TF61 875 aa27.35■■□□□ 1.97
PPP1R3E-206ENST00000560913 CLTCQ00610 1675 aaKnown RBP27.35■■□□□ 1.97
PPP1R3E-206ENST00000560913 MAP3K1Q13233 1512 aa27.35■■□□□ 1.97
PPP1R3E-206ENST00000560913 ZMYM3Q14202 1370 aa27.33■■□□□ 1.97
PPP1R3E-206ENST00000560913 CCDC141Q6ZP82 1450 aa27.32■■□□□ 1.96
PPP1R3E-206ENST00000560913 NPATQ14207 1427 aa27.31■■□□□ 1.96
PPP1R3E-206ENST00000560913 ARHGEF5Q12774 1597 aa27.31■■□□□ 1.96
PPP1R3E-206ENST00000560913 DHX29Q7Z478 1369 aaKnown RBP27.28■■□□□ 1.96
PPP1R3E-206ENST00000560913 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
PPP1R3E-206ENST00000560913 RSPH4AQ5TD94 716 aa27.27■■□□□ 1.96
PPP1R3E-206ENST00000560913 GGT6Q6P531 493 aa27.26■■□□□ 1.95
PPP1R3E-206ENST00000560913 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
PPP1R3E-206ENST00000560913 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
PPP1R3E-206ENST00000560913 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
PPP1R3E-206ENST00000560913 ZNF142P52746 1687 aaPredicted RBP27.19■■□□□ 1.94
PPP1R3E-206ENST00000560913 PTPRTO14522 1441 aa27.18■■□□□ 1.94
PPP1R3E-206ENST00000560913 NCOA1Q15788 1441 aa27.18■■□□□ 1.94
PPP1R3E-206ENST00000560913 CERKQ8TCT0 537 aa27.18■■□□□ 1.94
PPP1R3E-206ENST00000560913 MAST1Q9Y2H9 1570 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms