RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 YEATS2Q9ULM3 1422 aa29.39■■■□□ 2.3
RPL28-210ENST00000560583 CASKIN1Q8WXD9 1431 aa29.38■■■□□ 2.29
RPL28-210ENST00000560583 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
RPL28-210ENST00000560583 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
RPL28-210ENST00000560583 RIMS1Q86UR5 1692 aaKnown RBP29.35■■■□□ 2.29
RPL28-210ENST00000560583 CDC42BPBQ9Y5S2 1711 aa29.34■■■□□ 2.29
RPL28-210ENST00000560583 CDK11AQ9UQ88 783 aaPredicted RBP29.34■■■□□ 2.29
RPL28-210ENST00000560583 CCDC18Q5T9S5 1454 aa29.34■■■□□ 2.29
RPL28-210ENST00000560583 CLIP1P30622 1438 aa29.33■■■□□ 2.29
RPL28-210ENST00000560583 PREX2Q70Z35 1606 aa29.31■■■□□ 2.28
RPL28-210ENST00000560583 ARHGAP5Q13017 1502 aa29.31■■■□□ 2.28
RPL28-210ENST00000560583 FYCO1Q9BQS8 1478 aa29.3■■■□□ 2.28
RPL28-210ENST00000560583 ARID4BQ4LE39 1312 aaPredicted RBP29.3■■■□□ 2.28
RPL28-210ENST00000560583 KDM5CP41229 1560 aa29.27■■■□□ 2.28
RPL28-210ENST00000560583 EFCAB2Q5VUJ9 269 aa29.26■■■□□ 2.27
RPL28-210ENST00000560583 CDC42BPAQ5VT25 1732 aa29.24■■■□□ 2.27
RPL28-210ENST00000560583 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
RPL28-210ENST00000560583 FER1L4A9Z1Z3 1794 aa29.22■■■□□ 2.27
RPL28-210ENST00000560583 ABCC1P33527 1531 aa29.21■■■□□ 2.27
RPL28-210ENST00000560583 ITSN2Q9NZM3 1697 aa29.2■■■□□ 2.26
RPL28-210ENST00000560583 ATP10AO60312 1499 aa29.18■■■□□ 2.26
RPL28-210ENST00000560583 C9orf84Q5VXU9 1444 aa29.18■■■□□ 2.26
RPL28-210ENST00000560583 DIP2CQ9Y2E4 1556 aa29.17■■■□□ 2.26
RPL28-210ENST00000560583 LMTK3Q96Q04 1460 aa29.17■■■□□ 2.26
RPL28-210ENST00000560583 ARHGEF12Q9NZN5 1544 aa29.15■■■□□ 2.26
RPL28-210ENST00000560583 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
RPL28-210ENST00000560583 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
RPL28-210ENST00000560583 AFAP1Q8N556 730 aa29.1■■■□□ 2.25
RPL28-210ENST00000560583 TRAPPC8Q9Y2L5 1435 aa29.09■■■□□ 2.25
RPL28-210ENST00000560583 SAMD9LQ8IVG5 1584 aa29.09■■■□□ 2.25
RPL28-210ENST00000560583 MLH3Q9UHC1 1453 aa29.08■■■□□ 2.25
RPL28-210ENST00000560583 MLECQ14165 292 aa29.06■■■□□ 2.24
RPL28-210ENST00000560583 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
RPL28-210ENST00000560583 ILDR1Q86SU0 546 aaPredicted RBP29.05■■■□□ 2.24
RPL28-210ENST00000560583 GPATCH8Q9UKJ3 1502 aaKnown RBP29.03■■■□□ 2.24
RPL28-210ENST00000560583 SYCP2Q9BX26 1530 aa29.01■■■□□ 2.23
RPL28-210ENST00000560583 CEP162Q5TB80 1403 aa28.99■■■□□ 2.23
RPL28-210ENST00000560583 PLPPR3Q6T4P5 718 aa28.97■■■□□ 2.23
RPL28-210ENST00000560583 AGLP35573 1532 aa28.97■■■□□ 2.23
RPL28-210ENST00000560583 PREX1Q8TCU6 1659 aa28.95■■■□□ 2.22
RPL28-210ENST00000560583 TIAM1Q13009 1591 aa28.94■■■□□ 2.22
RPL28-210ENST00000560583 EHBP1L1Q8N3D4 1523 aa28.94■■■□□ 2.22
RPL28-210ENST00000560583 INO80Q9ULG1 1556 aaPredicted RBP28.91■■■□□ 2.22
RPL28-210ENST00000560583 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
RPL28-210ENST00000560583 MYT1LQ9UL68 1186 aa28.9■■■□□ 2.22
RPL28-210ENST00000560583 C3P01024 1663 aa28.89■■■□□ 2.22
RPL28-210ENST00000560583 HSPA2P54652 639 aa28.89■■■□□ 2.22
RPL28-210ENST00000560583 ZNF777Q9ULD5 760 aaPredicted RBP28.88■■■□□ 2.21
RPL28-210ENST00000560583 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
RPL28-210ENST00000560583 ATP7AQ04656 1500 aa28.86■■■□□ 2.21
RPL28-210ENST00000560583 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
RPL28-210ENST00000560583 PLEKHH2Q8IVE3 1493 aa28.85■■■□□ 2.21
RPL28-210ENST00000560583 CEBPAP49715 358 aaPredicted RBP28.84■■■□□ 2.21
RPL28-210ENST00000560583 PLXNC1O60486 1568 aa28.84■■■□□ 2.21
RPL28-210ENST00000560583 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
RPL28-210ENST00000560583 HNRNPMP52272 730 aaKnown RBP eCLIP28.81■■■□□ 2.25e-6■■■■□ 20.3
RPL28-210ENST00000560583 CFDP1Q9UEE9 299 aaPredicted RBP28.81■■■□□ 2.2
RPL28-210ENST00000560583 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
RPL28-210ENST00000560583 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
RPL28-210ENST00000560583 SETD1BQ9UPS6 1966 aaKnown RBP28.75■■■□□ 2.19
RPL28-210ENST00000560583 ADGBQ8N7X0 1667 aa28.74■■■□□ 2.19
RPL28-210ENST00000560583 MBD5Q9P267 1494 aa28.74■■■□□ 2.19
RPL28-210ENST00000560583 STRCQ7RTU9 1775 aa28.74■■■□□ 2.19
RPL28-210ENST00000560583 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
RPL28-210ENST00000560583 ZNF644Q9H582 1327 aaPredicted RBP28.72■■■□□ 2.19
RPL28-210ENST00000560583 UHRF1BP1Q6BDS2 1440 aa28.71■■■□□ 2.19
RPL28-210ENST00000560583 A2MP01023 1474 aa28.71■■■□□ 2.19
RPL28-210ENST00000560583 CNTLNQ9NXG0 1405 aa28.7■■■□□ 2.19
RPL28-210ENST00000560583 CLTCQ00610 1675 aaKnown RBP28.69■■■□□ 2.18
RPL28-210ENST00000560583 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
RPL28-210ENST00000560583 FBXO41Q8TF61 875 aa28.66■■■□□ 2.18
RPL28-210ENST00000560583 CAMSAP2Q08AD1 1489 aa28.66■■■□□ 2.18
RPL28-210ENST00000560583 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
RPL28-210ENST00000560583 ESF1Q9H501 851 aaKnown RBP28.61■■■□□ 2.17
RPL28-210ENST00000560583 CCDC141Q6ZP82 1450 aa28.6■■■□□ 2.17
RPL28-210ENST00000560583 LRRC9Q6ZRR7 1453 aa28.6■■■□□ 2.17
RPL28-210ENST00000560583 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
RPL28-210ENST00000560583 NPATQ14207 1427 aa28.59■■■□□ 2.17
RPL28-210ENST00000560583 ARHGEF5Q12774 1597 aa28.57■■■□□ 2.16
RPL28-210ENST00000560583 MYO3AQ8NEV4 1616 aa28.56■■■□□ 2.16
RPL28-210ENST00000560583 ZNF142P52746 1687 aaPredicted RBP28.55■■■□□ 2.16
RPL28-210ENST00000560583 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
RPL28-210ENST00000560583 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
RPL28-210ENST00000560583 PTPRKQ15262 1439 aa28.5■■■□□ 2.15
RPL28-210ENST00000560583 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
RPL28-210ENST00000560583 DHX29Q7Z478 1369 aaKnown RBP28.49■■■□□ 2.15
RPL28-210ENST00000560583 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
RPL28-210ENST00000560583 GGT6Q6P531 493 aa28.47■■■□□ 2.15
RPL28-210ENST00000560583 PTPRTO14522 1441 aa28.45■■■□□ 2.15
RPL28-210ENST00000560583 CERKQ8TCT0 537 aa28.45■■■□□ 2.14
RPL28-210ENST00000560583 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.14
RPL28-210ENST00000560583 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
RPL28-210ENST00000560583 KANK4Q5T7N3 995 aaPredicted RBP28.44■■■□□ 2.14
RPL28-210ENST00000560583 FAM135AQ9P2D6 1515 aa28.42■■■□□ 2.14
RPL28-210ENST00000560583 DMRT2Q9Y5R5 561 aa28.41■■■□□ 2.14
RPL28-210ENST00000560583 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
RPL28-210ENST00000560583 PPP6R1Q9UPN7 881 aa28.4■■■□□ 2.14
RPL28-210ENST00000560583 MYOM3Q5VTT5 1437 aa28.4■■■□□ 2.14
RPL28-210ENST00000560583 RSPH4AQ5TD94 716 aa28.39■■■□□ 2.14
RPL28-210ENST00000560583 RNF17Q9BXT8 1623 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms