RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
TRAF3-209ENST00000560463 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
TRAF3-209ENST00000560463 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
TRAF3-209ENST00000560463 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
TRAF3-209ENST00000560463 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
TRAF3-209ENST00000560463 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-209ENST00000560463 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
TRAF3-209ENST00000560463 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
TRAF3-209ENST00000560463 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
TRAF3-209ENST00000560463 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
TRAF3-209ENST00000560463 PLCH2O75038 1416 aa12.96□□□□□ -0.33
TRAF3-209ENST00000560463 GLI2P10070 1586 aa12.96□□□□□ -0.33
TRAF3-209ENST00000560463 KIF13AQ9H1H9 1805 aa12.96□□□□□ -0.33
TRAF3-209ENST00000560463 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
TRAF3-209ENST00000560463 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
TRAF3-209ENST00000560463 DAPK1P53355 1430 aa12.93□□□□□ -0.34
TRAF3-209ENST00000560463 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
TRAF3-209ENST00000560463 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
TRAF3-209ENST00000560463 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
TRAF3-209ENST00000560463 ITGAEP38570 1179 aa12.91□□□□□ -0.34
TRAF3-209ENST00000560463 ABCC1P33527 1531 aa12.91□□□□□ -0.34
TRAF3-209ENST00000560463 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
TRAF3-209ENST00000560463 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.34
TRAF3-209ENST00000560463 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
TRAF3-209ENST00000560463 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
TRAF3-209ENST00000560463 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
TRAF3-209ENST00000560463 SYCP2Q9BX26 1530 aa12.89□□□□□ -0.35
TRAF3-209ENST00000560463 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
TRAF3-209ENST00000560463 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-209ENST00000560463 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-209ENST00000560463 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 ABCC5O15440 1437 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 FANCAO15360 1455 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 ADGRL2O95490 1459 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 MBD5Q9P267 1494 aa12.88□□□□□ -0.35
TRAF3-209ENST00000560463 HRCP23327 699 aa12.87□□□□□ -0.35
TRAF3-209ENST00000560463 CD109Q6YHK3 1445 aa12.87□□□□□ -0.35
TRAF3-209ENST00000560463 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
TRAF3-209ENST00000560463 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
TRAF3-209ENST00000560463 NAIPQ13075 1403 aa12.85□□□□□ -0.35
TRAF3-209ENST00000560463 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
TRAF3-209ENST00000560463 NEO1Q92859 1461 aa12.85□□□□□ -0.35
TRAF3-209ENST00000560463 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
TRAF3-209ENST00000560463 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
TRAF3-209ENST00000560463 TSPY4P0CV99 314 aa12.83□□□□□ -0.36
TRAF3-209ENST00000560463 TSPY10P0CW01 314 aa12.83□□□□□ -0.36
TRAF3-209ENST00000560463 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
TRAF3-209ENST00000560463 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
TRAF3-209ENST00000560463 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
TRAF3-209ENST00000560463 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
TRAF3-209ENST00000560463 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
TRAF3-209ENST00000560463 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
TRAF3-209ENST00000560463 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.365e-6■■■■□ 23.4
TRAF3-209ENST00000560463 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-209ENST00000560463 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
TRAF3-209ENST00000560463 TEX14Q8IWB6 1497 aa12.79□□□□□ -0.36
TRAF3-209ENST00000560463 KDM6BO15054 1643 aa12.79□□□□□ -0.36
TRAF3-209ENST00000560463 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
TRAF3-209ENST00000560463 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
TRAF3-209ENST00000560463 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
TRAF3-209ENST00000560463 KDM5CP41229 1560 aa12.78□□□□□ -0.36
TRAF3-209ENST00000560463 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
TRAF3-209ENST00000560463 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.37
TRAF3-209ENST00000560463 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-209ENST00000560463 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
TRAF3-209ENST00000560463 ZFYVE16Q7Z3T8 1539 aa12.77□□□□□ -0.37
TRAF3-209ENST00000560463 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-209ENST00000560463 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
TRAF3-209ENST00000560463 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
TRAF3-209ENST00000560463 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
TRAF3-209ENST00000560463 DUOX2Q9NRD8 1548 aa12.76□□□□□ -0.37
TRAF3-209ENST00000560463 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
TRAF3-209ENST00000560463 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
TRAF3-209ENST00000560463 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
TRAF3-209ENST00000560463 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
TRAF3-209ENST00000560463 KIF15Q9NS87 1388 aa12.73□□□□□ -0.37
TRAF3-209ENST00000560463 UNC13BO14795 1591 aa12.73□□□□□ -0.37
TRAF3-209ENST00000560463 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-209ENST00000560463 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
TRAF3-209ENST00000560463 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
TRAF3-209ENST00000560463 BCORL1Q5H9F3 1711 aa12.72□□□□□ -0.37
TRAF3-209ENST00000560463 MLH3Q9UHC1 1453 aa12.72□□□□□ -0.37
TRAF3-209ENST00000560463 ERBINQ96RT1 1412 aa12.71□□□□□ -0.38
TRAF3-209ENST00000560463 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
TRAF3-209ENST00000560463 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
TRAF3-209ENST00000560463 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
TRAF3-209ENST00000560463 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
TRAF3-209ENST00000560463 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
TRAF3-209ENST00000560463 AFAP1Q8N556 730 aa12.69□□□□□ -0.38
TRAF3-209ENST00000560463 IQGAP3Q86VI3 1631 aa12.69□□□□□ -0.38
TRAF3-209ENST00000560463 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
TRAF3-209ENST00000560463 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
TRAF3-209ENST00000560463 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
TRAF3-209ENST00000560463 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
TRAF3-209ENST00000560463 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
TRAF3-209ENST00000560463 PZPP20742 1482 aa12.63□□□□□ -0.39
TRAF3-209ENST00000560463 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms