RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 MAGI2Q86UL8 1455 aa29.06■■■□□ 2.24
TNFAIP2-206ENST00000560428 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
TNFAIP2-206ENST00000560428 ZFYVE16Q7Z3T8 1539 aa29.02■■■□□ 2.24
TNFAIP2-206ENST00000560428 ADAMTSL3P82987 1691 aa29.02■■■□□ 2.24
TNFAIP2-206ENST00000560428 CEP162Q5TB80 1403 aa29.02■■■□□ 2.24
TNFAIP2-206ENST00000560428 PREX2Q70Z35 1606 aa29.02■■■□□ 2.24
TNFAIP2-206ENST00000560428 CDC42BPBQ9Y5S2 1711 aa29.01■■■□□ 2.23
TNFAIP2-206ENST00000560428 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
TNFAIP2-206ENST00000560428 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
TNFAIP2-206ENST00000560428 ZNF518AQ6AHZ1 1483 aa28.96■■■□□ 2.23
TNFAIP2-206ENST00000560428 CDC42BPAQ5VT25 1732 aa28.94■■■□□ 2.22
TNFAIP2-206ENST00000560428 ARID4BQ4LE39 1312 aaPredicted RBP28.94■■■□□ 2.22
TNFAIP2-206ENST00000560428 KDM5CP41229 1560 aa28.92■■■□□ 2.22
TNFAIP2-206ENST00000560428 ABCC1P33527 1531 aa28.89■■■□□ 2.22
TNFAIP2-206ENST00000560428 MADDQ8WXG6 1647 aa28.88■■■□□ 2.21
TNFAIP2-206ENST00000560428 PTPRMP28827 1452 aa28.88■■■□□ 2.21
TNFAIP2-206ENST00000560428 SIGLEC1Q9BZZ2 1709 aa28.87■■■□□ 2.21
TNFAIP2-206ENST00000560428 ATP10AO60312 1499 aa28.86■■■□□ 2.21
TNFAIP2-206ENST00000560428 ITSN2Q9NZM3 1697 aa28.86■■■□□ 2.21
TNFAIP2-206ENST00000560428 HECW2Q9P2P5 1572 aa28.85■■■□□ 2.21
TNFAIP2-206ENST00000560428 MTUS2Q5JR59 1369 aa28.84■■■□□ 2.21
TNFAIP2-206ENST00000560428 C9orf84Q5VXU9 1444 aa28.84■■■□□ 2.21
TNFAIP2-206ENST00000560428 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
TNFAIP2-206ENST00000560428 AFAP1Q8N556 730 aa28.82■■■□□ 2.2
TNFAIP2-206ENST00000560428 EHBP1L1Q8N3D4 1523 aa28.82■■■□□ 2.2
TNFAIP2-206ENST00000560428 ARHGEF12Q9NZN5 1544 aa28.82■■■□□ 2.2
TNFAIP2-206ENST00000560428 MLH3Q9UHC1 1453 aa28.81■■■□□ 2.2
TNFAIP2-206ENST00000560428 SAMD9LQ8IVG5 1584 aa28.79■■■□□ 2.2
TNFAIP2-206ENST00000560428 TRAPPC8Q9Y2L5 1435 aa28.78■■■□□ 2.2
TNFAIP2-206ENST00000560428 RIMS1Q86UR5 1692 aaKnown RBP28.78■■■□□ 2.2
TNFAIP2-206ENST00000560428 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
TNFAIP2-206ENST00000560428 DIP2CQ9Y2E4 1556 aa28.77■■■□□ 2.2
TNFAIP2-206ENST00000560428 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.2
TNFAIP2-206ENST00000560428 REREQ9P2R6 1566 aa28.76■■■□□ 2.19
TNFAIP2-206ENST00000560428 ABCA6Q8N139 1617 aa28.73■■■□□ 2.19
TNFAIP2-206ENST00000560428 PLEKHH2Q8IVE3 1493 aa28.72■■■□□ 2.19
TNFAIP2-206ENST00000560428 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
TNFAIP2-206ENST00000560428 SYCP2Q9BX26 1530 aa28.72■■■□□ 2.19
TNFAIP2-206ENST00000560428 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
TNFAIP2-206ENST00000560428 FER1L4A9Z1Z3 1794 aa28.71■■■□□ 2.19
TNFAIP2-206ENST00000560428 CFDP1Q9UEE9 299 aaPredicted RBP28.71■■■□□ 2.19
TNFAIP2-206ENST00000560428 KIAA1107Q9UPP5 1409 aa28.7■■■□□ 2.19
TNFAIP2-206ENST00000560428 MYT1LQ9UL68 1186 aa28.7■■■□□ 2.18
TNFAIP2-206ENST00000560428 ZNF777Q9ULD5 760 aaPredicted RBP28.7■■■□□ 2.18
TNFAIP2-206ENST00000560428 KIDINS220Q9ULH0 1771 aa28.69■■■□□ 2.18
TNFAIP2-206ENST00000560428 MLECQ14165 292 aa28.66■■■□□ 2.18
TNFAIP2-206ENST00000560428 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
TNFAIP2-206ENST00000560428 AGLP35573 1532 aa28.64■■■□□ 2.18
TNFAIP2-206ENST00000560428 HNRNPMP52272 730 aaKnown RBP eCLIP28.61■■■□□ 2.17
TNFAIP2-206ENST00000560428 NCOA2Q15596 1464 aa28.6■■■□□ 2.17
TNFAIP2-206ENST00000560428 SPAG9O60271 1321 aaKnown RBP28.59■■■□□ 2.17
TNFAIP2-206ENST00000560428 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
TNFAIP2-206ENST00000560428 ATP7AQ04656 1500 aa28.58■■■□□ 2.17
TNFAIP2-206ENST00000560428 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
TNFAIP2-206ENST00000560428 LMTK3Q96Q04 1460 aa28.57■■■□□ 2.16
TNFAIP2-206ENST00000560428 LRRC9Q6ZRR7 1453 aa28.55■■■□□ 2.16
TNFAIP2-206ENST00000560428 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
TNFAIP2-206ENST00000560428 ZNF644Q9H582 1327 aaPredicted RBP28.51■■■□□ 2.15
TNFAIP2-206ENST00000560428 PLXNC1O60486 1568 aa28.49■■■□□ 2.15
TNFAIP2-206ENST00000560428 CAMSAP2Q08AD1 1489 aa28.47■■■□□ 2.15
TNFAIP2-206ENST00000560428 PLPPR3Q6T4P5 718 aa28.47■■■□□ 2.15
TNFAIP2-206ENST00000560428 A2MP01023 1474 aa28.46■■■□□ 2.15
TNFAIP2-206ENST00000560428 ADGBQ8N7X0 1667 aa28.45■■■□□ 2.15
TNFAIP2-206ENST00000560428 RTEL1-TNFRSF6BF6WH68 1400 aa28.45■■■□□ 2.15
TNFAIP2-206ENST00000560428 PREX1Q8TCU6 1659 aa28.43■■■□□ 2.14
TNFAIP2-206ENST00000560428 CCDC141Q6ZP82 1450 aa28.43■■■□□ 2.14
TNFAIP2-206ENST00000560428 CNTLNQ9NXG0 1405 aa28.43■■■□□ 2.14
TNFAIP2-206ENST00000560428 RSPH4AQ5TD94 716 aa28.41■■■□□ 2.14
TNFAIP2-206ENST00000560428 ESF1Q9H501 851 aaKnown RBP28.41■■■□□ 2.14
TNFAIP2-206ENST00000560428 C3P01024 1663 aa28.41■■■□□ 2.14
TNFAIP2-206ENST00000560428 ARHGEF5Q12774 1597 aa28.4■■■□□ 2.14
TNFAIP2-206ENST00000560428 CEBPAP49715 358 aaPredicted RBP28.39■■■□□ 2.14
TNFAIP2-206ENST00000560428 KANK4Q5T7N3 995 aaPredicted RBP28.39■■■□□ 2.14
TNFAIP2-206ENST00000560428 MROH2AA6NES4 1674 aa28.38■■■□□ 2.13
TNFAIP2-206ENST00000560428 SETD1BQ9UPS6 1966 aaKnown RBP28.35■■■□□ 2.13
TNFAIP2-206ENST00000560428 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
TNFAIP2-206ENST00000560428 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
TNFAIP2-206ENST00000560428 HSPA2P54652 639 aa28.32■■■□□ 2.12
TNFAIP2-206ENST00000560428 APLP2Q06481 763 aa28.31■■■□□ 2.12
TNFAIP2-206ENST00000560428 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
TNFAIP2-206ENST00000560428 DHX29Q7Z478 1369 aaKnown RBP28.3■■■□□ 2.12
TNFAIP2-206ENST00000560428 PPP6R1Q9UPN7 881 aa28.28■■■□□ 2.12
TNFAIP2-206ENST00000560428 CLTCQ00610 1675 aaKnown RBP28.27■■■□□ 2.12
TNFAIP2-206ENST00000560428 MAST1Q9Y2H9 1570 aa28.26■■■□□ 2.11
TNFAIP2-206ENST00000560428 NPATQ14207 1427 aa28.26■■■□□ 2.11
TNFAIP2-206ENST00000560428 TSPY4P0CV99 314 aa28.25■■■□□ 2.11
TNFAIP2-206ENST00000560428 TSPY10P0CW01 314 aa28.25■■■□□ 2.11
TNFAIP2-206ENST00000560428 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
TNFAIP2-206ENST00000560428 GGT6Q6P531 493 aa28.24■■■□□ 2.11
TNFAIP2-206ENST00000560428 FAM135AQ9P2D6 1515 aa28.2■■■□□ 2.1
TNFAIP2-206ENST00000560428 ILDR1Q86SU0 546 aaPredicted RBP28.16■■■□□ 2.1
TNFAIP2-206ENST00000560428 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
TNFAIP2-206ENST00000560428 KIF3BO15066 747 aa28.15■■■□□ 2.1
TNFAIP2-206ENST00000560428 PTPRKQ15262 1439 aa28.14■■■□□ 2.1
TNFAIP2-206ENST00000560428 STRCQ7RTU9 1775 aa28.14■■■□□ 2.09
TNFAIP2-206ENST00000560428 KDM5DQ9BY66 1539 aa28.13■■■□□ 2.09
TNFAIP2-206ENST00000560428 FGD6Q6ZV73 1430 aa28.11■■■□□ 2.09
TNFAIP2-206ENST00000560428 CROCC2H7BZ55 1655 aa28.11■■■□□ 2.09
TNFAIP2-206ENST00000560428 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
TNFAIP2-206ENST00000560428 EIF2AK4Q9P2K8 1649 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms