RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 POGZQ7Z3K3 1410 aa23.63■■□□□ 1.37
PSME1-207ENST00000560420 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
PSME1-207ENST00000560420 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
PSME1-207ENST00000560420 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
PSME1-207ENST00000560420 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
PSME1-207ENST00000560420 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
PSME1-207ENST00000560420 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
PSME1-207ENST00000560420 MAGI2Q86UL8 1455 aa23.57■■□□□ 1.36
PSME1-207ENST00000560420 KDM5CP41229 1560 aa23.57■■□□□ 1.36
PSME1-207ENST00000560420 ABCC1P33527 1531 aa23.56■■□□□ 1.36
PSME1-207ENST00000560420 EHBP1L1Q8N3D4 1523 aa23.56■■□□□ 1.36
PSME1-207ENST00000560420 GPATCH8Q9UKJ3 1502 aaKnown RBP23.56■■□□□ 1.36
PSME1-207ENST00000560420 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
PSME1-207ENST00000560420 ZFYVE16Q7Z3T8 1539 aa23.53■■□□□ 1.36
PSME1-207ENST00000560420 ARHGEF12Q9NZN5 1544 aa23.53■■□□□ 1.36
PSME1-207ENST00000560420 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
PSME1-207ENST00000560420 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
PSME1-207ENST00000560420 SIGLEC1Q9BZZ2 1709 aa23.51■■□□□ 1.35
PSME1-207ENST00000560420 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
PSME1-207ENST00000560420 ADAMTSL3P82987 1691 aa23.5■■□□□ 1.35
PSME1-207ENST00000560420 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
PSME1-207ENST00000560420 SAMD9LQ8IVG5 1584 aa23.49■■□□□ 1.35
PSME1-207ENST00000560420 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
PSME1-207ENST00000560420 BCORL1Q5H9F3 1711 aa23.47■■□□□ 1.35
PSME1-207ENST00000560420 TRAPPC8Q9Y2L5 1435 aa23.46■■□□□ 1.35
PSME1-207ENST00000560420 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
PSME1-207ENST00000560420 MLH3Q9UHC1 1453 aa23.44■■□□□ 1.34
PSME1-207ENST00000560420 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
PSME1-207ENST00000560420 LRRC9Q6ZRR7 1453 aa23.42■■□□□ 1.34
PSME1-207ENST00000560420 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
PSME1-207ENST00000560420 CCNB3Q8WWL7 1395 aa23.41■■□□□ 1.34
PSME1-207ENST00000560420 ATP10AO60312 1499 aa23.41■■□□□ 1.34
PSME1-207ENST00000560420 REREQ9P2R6 1566 aa23.4■■□□□ 1.34
PSME1-207ENST00000560420 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
PSME1-207ENST00000560420 SYCP2Q9BX26 1530 aa23.4■■□□□ 1.34
PSME1-207ENST00000560420 NCOA2Q15596 1464 aa23.4■■□□□ 1.34
PSME1-207ENST00000560420 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.34
PSME1-207ENST00000560420 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.33
PSME1-207ENST00000560420 ABCA6Q8N139 1617 aa23.38■■□□□ 1.33
PSME1-207ENST00000560420 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
PSME1-207ENST00000560420 KIDINS220Q9ULH0 1771 aa23.37■■□□□ 1.33
PSME1-207ENST00000560420 MADDQ8WXG6 1647 aa23.37■■□□□ 1.33
PSME1-207ENST00000560420 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
PSME1-207ENST00000560420 MBD5Q9P267 1494 aa23.34■■□□□ 1.33
PSME1-207ENST00000560420 PTPRMP28827 1452 aa23.33■■□□□ 1.33
PSME1-207ENST00000560420 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
PSME1-207ENST00000560420 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
PSME1-207ENST00000560420 AGLP35573 1532 aa23.29■■□□□ 1.32
PSME1-207ENST00000560420 ZNF777Q9ULD5 760 aaPredicted RBP23.28■■□□□ 1.32
PSME1-207ENST00000560420 ARID4BQ4LE39 1312 aaPredicted RBP23.28■■□□□ 1.32
PSME1-207ENST00000560420 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
PSME1-207ENST00000560420 HNRNPMP52272 730 aaKnown RBP eCLIP23.27■■□□□ 1.32
PSME1-207ENST00000560420 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
PSME1-207ENST00000560420 RIMS1Q86UR5 1692 aaKnown RBP23.25■■□□□ 1.31
PSME1-207ENST00000560420 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
PSME1-207ENST00000560420 PLXNC1O60486 1568 aa23.24■■□□□ 1.31
PSME1-207ENST00000560420 FER1L4A9Z1Z3 1794 aa23.22■■□□□ 1.31
PSME1-207ENST00000560420 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
PSME1-207ENST00000560420 ARHGEF5Q12774 1597 aa23.2■■□□□ 1.3
PSME1-207ENST00000560420 RTEL1-TNFRSF6BF6WH68 1400 aa23.19■■□□□ 1.3
PSME1-207ENST00000560420 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
PSME1-207ENST00000560420 CCDC141Q6ZP82 1450 aa23.18■■□□□ 1.3
PSME1-207ENST00000560420 MIA2Q96PC5 1412 aa23.18■■□□□ 1.3
PSME1-207ENST00000560420 A2MP01023 1474 aa23.14■■□□□ 1.29
PSME1-207ENST00000560420 ADGBQ8N7X0 1667 aa23.13■■□□□ 1.29
PSME1-207ENST00000560420 MLECQ14165 292 aa23.13■■□□□ 1.29
PSME1-207ENST00000560420 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
PSME1-207ENST00000560420 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
PSME1-207ENST00000560420 RSPH4AQ5TD94 716 aa23.1■■□□□ 1.29
PSME1-207ENST00000560420 LMTK3Q96Q04 1460 aa23.09■■□□□ 1.29
PSME1-207ENST00000560420 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
PSME1-207ENST00000560420 APLP2Q06481 763 aa23.05■■□□□ 1.28
PSME1-207ENST00000560420 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
PSME1-207ENST00000560420 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
PSME1-207ENST00000560420 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
PSME1-207ENST00000560420 C3P01024 1663 aa23.03■■□□□ 1.28
PSME1-207ENST00000560420 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
PSME1-207ENST00000560420 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
PSME1-207ENST00000560420 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
PSME1-207ENST00000560420 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
PSME1-207ENST00000560420 ABCC5O15440 1437 aa22.98■■□□□ 1.27
PSME1-207ENST00000560420 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
PSME1-207ENST00000560420 CEBPAP49715 358 aaPredicted RBP22.97■■□□□ 1.27
PSME1-207ENST00000560420 PREX1Q8TCU6 1659 aa22.96■■□□□ 1.27
PSME1-207ENST00000560420 FAM135AQ9P2D6 1515 aa22.95■■□□□ 1.26
PSME1-207ENST00000560420 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
PSME1-207ENST00000560420 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
PSME1-207ENST00000560420 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
PSME1-207ENST00000560420 DAPK1P53355 1430 aa22.93■■□□□ 1.26
PSME1-207ENST00000560420 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
PSME1-207ENST00000560420 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
PSME1-207ENST00000560420 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
PSME1-207ENST00000560420 NPATQ14207 1427 aa22.91■■□□□ 1.26
PSME1-207ENST00000560420 SETD1BQ9UPS6 1966 aaKnown RBP22.9■■□□□ 1.26
PSME1-207ENST00000560420 ZMYM3Q14202 1370 aa22.9■■□□□ 1.26
PSME1-207ENST00000560420 MROH1Q8NDA8 1641 aa22.89■■□□□ 1.25
PSME1-207ENST00000560420 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
PSME1-207ENST00000560420 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
PSME1-207ENST00000560420 PTPRKQ15262 1439 aa22.87■■□□□ 1.25
PSME1-207ENST00000560420 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms