RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
HMBOX1-213ENST00000560269 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
HMBOX1-213ENST00000560269 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
HMBOX1-213ENST00000560269 TCOF1Q13428 1488 aaKnown RBP20.92■□□□□ 0.94
HMBOX1-213ENST00000560269 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
HMBOX1-213ENST00000560269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
HMBOX1-213ENST00000560269 PPRC1Q5VV67 1664 aaKnown RBP20.87■□□□□ 0.93
HMBOX1-213ENST00000560269 EFCAB2Q5VUJ9 269 aa20.87■□□□□ 0.93
HMBOX1-213ENST00000560269 SAMD9LQ8IVG5 1584 aa20.87■□□□□ 0.93
HMBOX1-213ENST00000560269 CFAP74Q9C0B2 1584 aa20.87■□□□□ 0.93
HMBOX1-213ENST00000560269 FANCAO15360 1455 aa20.87■□□□□ 0.93
HMBOX1-213ENST00000560269 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
HMBOX1-213ENST00000560269 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
HMBOX1-213ENST00000560269 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
HMBOX1-213ENST00000560269 TSPOAP1O95153 1857 aa20.83■□□□□ 0.92
HMBOX1-213ENST00000560269 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
HMBOX1-213ENST00000560269 NEO1Q92859 1461 aa20.82■□□□□ 0.92
HMBOX1-213ENST00000560269 ZNF777Q9ULD5 760 aaPredicted RBP20.82■□□□□ 0.92
HMBOX1-213ENST00000560269 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
HMBOX1-213ENST00000560269 ABCC1P33527 1531 aa20.81■□□□□ 0.92
HMBOX1-213ENST00000560269 TEX14Q8IWB6 1497 aa20.81■□□□□ 0.92
HMBOX1-213ENST00000560269 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
HMBOX1-213ENST00000560269 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
HMBOX1-213ENST00000560269 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
HMBOX1-213ENST00000560269 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
HMBOX1-213ENST00000560269 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
HMBOX1-213ENST00000560269 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
HMBOX1-213ENST00000560269 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
HMBOX1-213ENST00000560269 ARHGEF12Q9NZN5 1544 aa20.77■□□□□ 0.92
HMBOX1-213ENST00000560269 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
HMBOX1-213ENST00000560269 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
HMBOX1-213ENST00000560269 DAPK1P53355 1430 aa20.73■□□□□ 0.91
HMBOX1-213ENST00000560269 ABCC5O15440 1437 aa20.72■□□□□ 0.91
HMBOX1-213ENST00000560269 SCAPERQ9BY12 1400 aa20.72■□□□□ 0.91
HMBOX1-213ENST00000560269 HNRNPMP52272 730 aaKnown RBP eCLIP20.72■□□□□ 0.919e-9■■■■■ 30.5
HMBOX1-213ENST00000560269 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
HMBOX1-213ENST00000560269 CCDC141Q6ZP82 1450 aa20.72■□□□□ 0.91
HMBOX1-213ENST00000560269 PTPRKQ15262 1439 aa20.69■□□□□ 0.9
HMBOX1-213ENST00000560269 TRAPPC8Q9Y2L5 1435 aa20.69■□□□□ 0.9
HMBOX1-213ENST00000560269 SHANK2Q9UPX8 1470 aa20.69■□□□□ 0.9
HMBOX1-213ENST00000560269 POGZQ7Z3K3 1410 aa20.67■□□□□ 0.9
HMBOX1-213ENST00000560269 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
HMBOX1-213ENST00000560269 MAST1Q9Y2H9 1570 aa20.67■□□□□ 0.9
HMBOX1-213ENST00000560269 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
HMBOX1-213ENST00000560269 RICTORQ6R327 1708 aa20.66■□□□□ 0.9
HMBOX1-213ENST00000560269 ITGAEP38570 1179 aa20.65■□□□□ 0.9
HMBOX1-213ENST00000560269 KDM5CP41229 1560 aa20.64■□□□□ 0.9
HMBOX1-213ENST00000560269 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.89
HMBOX1-213ENST00000560269 PCGF6Q9BYE7 350 aa20.63■□□□□ 0.89
HMBOX1-213ENST00000560269 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
HMBOX1-213ENST00000560269 ADGRL2O95490 1459 aa20.62■□□□□ 0.89
HMBOX1-213ENST00000560269 C9orf84Q5VXU9 1444 aa20.62■□□□□ 0.89
HMBOX1-213ENST00000560269 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
HMBOX1-213ENST00000560269 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
HMBOX1-213ENST00000560269 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
HMBOX1-213ENST00000560269 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
HMBOX1-213ENST00000560269 ROCK1Q13464 1354 aa20.6■□□□□ 0.89
HMBOX1-213ENST00000560269 INO80Q9ULG1 1556 aaPredicted RBP20.6■□□□□ 0.89
HMBOX1-213ENST00000560269 COL17A1Q9UMD9 1497 aaPredicted RBP20.6■□□□□ 0.89
HMBOX1-213ENST00000560269 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.89
HMBOX1-213ENST00000560269 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.89
HMBOX1-213ENST00000560269 RAPGEF3O95398 923 aa20.58■□□□□ 0.89
HMBOX1-213ENST00000560269 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
HMBOX1-213ENST00000560269 PLXNC1O60486 1568 aa20.58■□□□□ 0.88
HMBOX1-213ENST00000560269 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
HMBOX1-213ENST00000560269 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
HMBOX1-213ENST00000560269 ATP7AQ04656 1500 aa20.57■□□□□ 0.88
HMBOX1-213ENST00000560269 KIDINS220Q9ULH0 1771 aa20.57■□□□□ 0.88
HMBOX1-213ENST00000560269 HECW2Q9P2P5 1572 aa20.56■□□□□ 0.88
HMBOX1-213ENST00000560269 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
HMBOX1-213ENST00000560269 ANKRD30AQ9BXX3 1397 aa20.56■□□□□ 0.88
HMBOX1-213ENST00000560269 KDM6BO15054 1643 aa20.55■□□□□ 0.88
HMBOX1-213ENST00000560269 HFM1A2PYH4 1435 aa20.54■□□□□ 0.88
HMBOX1-213ENST00000560269 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
HMBOX1-213ENST00000560269 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
HMBOX1-213ENST00000560269 NAIPQ13075 1403 aa20.52■□□□□ 0.87
HMBOX1-213ENST00000560269 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
HMBOX1-213ENST00000560269 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
HMBOX1-213ENST00000560269 KIF15Q9NS87 1388 aa20.48■□□□□ 0.87
HMBOX1-213ENST00000560269 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
HMBOX1-213ENST00000560269 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
HMBOX1-213ENST00000560269 DIP2CQ9Y2E4 1556 aa20.46■□□□□ 0.87
HMBOX1-213ENST00000560269 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
HMBOX1-213ENST00000560269 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
HMBOX1-213ENST00000560269 ARHGEF40Q8TER5 1519 aa20.43■□□□□ 0.86
HMBOX1-213ENST00000560269 ANKRD50Q9ULJ7 1429 aa20.43■□□□□ 0.86
HMBOX1-213ENST00000560269 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
HMBOX1-213ENST00000560269 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
HMBOX1-213ENST00000560269 HRCP23327 699 aa20.41■□□□□ 0.86
HMBOX1-213ENST00000560269 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
HMBOX1-213ENST00000560269 A2MP01023 1474 aa20.41■□□□□ 0.86
HMBOX1-213ENST00000560269 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
HMBOX1-213ENST00000560269 ATP10AO60312 1499 aa20.4■□□□□ 0.86
HMBOX1-213ENST00000560269 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
HMBOX1-213ENST00000560269 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
HMBOX1-213ENST00000560269 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
HMBOX1-213ENST00000560269 UNC13BO14795 1591 aa20.33■□□□□ 0.84
HMBOX1-213ENST00000560269 AGLP35573 1532 aa20.32■□□□□ 0.84
HMBOX1-213ENST00000560269 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
HMBOX1-213ENST00000560269 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms