RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 PLCH2O75038 1416 aa17.81■□□□□ 0.44
RORA-212ENST00000560004 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
RORA-212ENST00000560004 CFAP74Q9C0B2 1584 aa17.8■□□□□ 0.44
RORA-212ENST00000560004 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
RORA-212ENST00000560004 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
RORA-212ENST00000560004 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
RORA-212ENST00000560004 FANCAO15360 1455 aa17.76■□□□□ 0.43
RORA-212ENST00000560004 ABCC1P33527 1531 aa17.76■□□□□ 0.43
RORA-212ENST00000560004 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
RORA-212ENST00000560004 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
RORA-212ENST00000560004 PTPN23Q9H3S7 1636 aa17.75■□□□□ 0.43
RORA-212ENST00000560004 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
RORA-212ENST00000560004 NEO1Q92859 1461 aa17.75■□□□□ 0.43
RORA-212ENST00000560004 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
RORA-212ENST00000560004 CAMSAP2Q08AD1 1489 aa17.74■□□□□ 0.43
RORA-212ENST00000560004 TCOF1Q13428 1488 aaKnown RBP17.73■□□□□ 0.43
RORA-212ENST00000560004 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
RORA-212ENST00000560004 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
RORA-212ENST00000560004 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
RORA-212ENST00000560004 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
RORA-212ENST00000560004 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
RORA-212ENST00000560004 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
RORA-212ENST00000560004 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
RORA-212ENST00000560004 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
RORA-212ENST00000560004 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
RORA-212ENST00000560004 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
RORA-212ENST00000560004 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
RORA-212ENST00000560004 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
RORA-212ENST00000560004 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
RORA-212ENST00000560004 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
RORA-212ENST00000560004 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
RORA-212ENST00000560004 DNMT1P26358 1616 aaKnown RBP17.64■□□□□ 0.41
RORA-212ENST00000560004 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
RORA-212ENST00000560004 KDM5CP41229 1560 aa17.63■□□□□ 0.41
RORA-212ENST00000560004 POGZQ7Z3K3 1410 aa17.63■□□□□ 0.41
RORA-212ENST00000560004 KDM6BO15054 1643 aa17.62■□□□□ 0.41
RORA-212ENST00000560004 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
RORA-212ENST00000560004 TRAPPC8Q9Y2L5 1435 aa17.61■□□□□ 0.41
RORA-212ENST00000560004 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
RORA-212ENST00000560004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
RORA-212ENST00000560004 ZMYM4Q5VZL5 1548 aa17.6■□□□□ 0.41
RORA-212ENST00000560004 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
RORA-212ENST00000560004 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
RORA-212ENST00000560004 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
RORA-212ENST00000560004 ZNF518AQ6AHZ1 1483 aa17.58■□□□□ 0.41
RORA-212ENST00000560004 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
RORA-212ENST00000560004 ZFYVE16Q7Z3T8 1539 aa17.57■□□□□ 0.4
RORA-212ENST00000560004 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
RORA-212ENST00000560004 ABCC5O15440 1437 aa17.56■□□□□ 0.4
RORA-212ENST00000560004 DAPK1P53355 1430 aa17.56■□□□□ 0.4
RORA-212ENST00000560004 HECW2Q9P2P5 1572 aa17.56■□□□□ 0.4
RORA-212ENST00000560004 KIDINS220Q9ULH0 1771 aa17.55■□□□□ 0.4
RORA-212ENST00000560004 HNRNPMP52272 730 aaKnown RBP eCLIP17.54■□□□□ 0.4
RORA-212ENST00000560004 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
RORA-212ENST00000560004 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
RORA-212ENST00000560004 ATP7AQ04656 1500 aa17.52■□□□□ 0.4
RORA-212ENST00000560004 ABCA6Q8N139 1617 aa17.52■□□□□ 0.4
RORA-212ENST00000560004 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
RORA-212ENST00000560004 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.39
RORA-212ENST00000560004 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
RORA-212ENST00000560004 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
RORA-212ENST00000560004 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
RORA-212ENST00000560004 DIP2CQ9Y2E4 1556 aa17.5■□□□□ 0.39
RORA-212ENST00000560004 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
RORA-212ENST00000560004 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
RORA-212ENST00000560004 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
RORA-212ENST00000560004 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
RORA-212ENST00000560004 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
RORA-212ENST00000560004 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
RORA-212ENST00000560004 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
RORA-212ENST00000560004 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
RORA-212ENST00000560004 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
RORA-212ENST00000560004 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
RORA-212ENST00000560004 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
RORA-212ENST00000560004 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
RORA-212ENST00000560004 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
RORA-212ENST00000560004 ITGAEP38570 1179 aa17.39■□□□□ 0.37
RORA-212ENST00000560004 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
RORA-212ENST00000560004 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
RORA-212ENST00000560004 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
RORA-212ENST00000560004 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
RORA-212ENST00000560004 CHIC2Q9UKJ5 165 aa17.37■□□□□ 0.37
RORA-212ENST00000560004 KIF15Q9NS87 1388 aa17.37■□□□□ 0.37
RORA-212ENST00000560004 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
RORA-212ENST00000560004 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
RORA-212ENST00000560004 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
RORA-212ENST00000560004 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
RORA-212ENST00000560004 ATP10AO60312 1499 aa17.36■□□□□ 0.37
RORA-212ENST00000560004 A2MP01023 1474 aa17.36■□□□□ 0.37
RORA-212ENST00000560004 NAIPQ13075 1403 aa17.35■□□□□ 0.37
RORA-212ENST00000560004 ERBINQ96RT1 1412 aa17.33■□□□□ 0.36
RORA-212ENST00000560004 AGLP35573 1532 aa17.32■□□□□ 0.36
RORA-212ENST00000560004 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
RORA-212ENST00000560004 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
RORA-212ENST00000560004 MROH1Q8NDA8 1641 aa17.31■□□□□ 0.36
RORA-212ENST00000560004 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
RORA-212ENST00000560004 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
RORA-212ENST00000560004 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
RORA-212ENST00000560004 UNC13BO14795 1591 aa17.28■□□□□ 0.36
RORA-212ENST00000560004 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms