RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 MAGI2Q86UL8 1455 aa33.07■■■□□ 2.88
CHRNA3-207ENST00000559941 POGZQ7Z3K3 1410 aa33.07■■■□□ 2.88
CHRNA3-207ENST00000559941 BCORL1Q5H9F3 1711 aa33.06■■■□□ 2.88
CHRNA3-207ENST00000559941 CDC42BPBQ9Y5S2 1711 aa33.05■■■□□ 2.88
CHRNA3-207ENST00000559941 ARHGAP5Q13017 1502 aa33.05■■■□□ 2.88
CHRNA3-207ENST00000559941 ZFYVE16Q7Z3T8 1539 aa33.04■■■□□ 2.88
CHRNA3-207ENST00000559941 ARID4BQ4LE39 1312 aaPredicted RBP33.02■■■□□ 2.88
CHRNA3-207ENST00000559941 YEATS2Q9ULM3 1422 aa33.01■■■□□ 2.87
CHRNA3-207ENST00000559941 PREX2Q70Z35 1606 aa33■■■□□ 2.87
CHRNA3-207ENST00000559941 CEP162Q5TB80 1403 aa32.95■■■□□ 2.87
CHRNA3-207ENST00000559941 CDC42BPAQ5VT25 1732 aa32.95■■■□□ 2.87
CHRNA3-207ENST00000559941 PTPRMP28827 1452 aa32.94■■■□□ 2.86
CHRNA3-207ENST00000559941 ZNF518AQ6AHZ1 1483 aa32.93■■■□□ 2.86
CHRNA3-207ENST00000559941 HECW2Q9P2P5 1572 aa32.93■■■□□ 2.86
CHRNA3-207ENST00000559941 MADDQ8WXG6 1647 aa32.93■■■□□ 2.86
CHRNA3-207ENST00000559941 SIGLEC1Q9BZZ2 1709 aa32.93■■■□□ 2.86
CHRNA3-207ENST00000559941 KDM5CP41229 1560 aa32.9■■■□□ 2.86
CHRNA3-207ENST00000559941 AFAP1Q8N556 730 aa32.88■■■□□ 2.85
CHRNA3-207ENST00000559941 ATP10AO60312 1499 aa32.87■■■□□ 2.85
CHRNA3-207ENST00000559941 ABCC1P33527 1531 aa32.87■■■□□ 2.85
CHRNA3-207ENST00000559941 ITSN2Q9NZM3 1697 aa32.84■■■□□ 2.85
CHRNA3-207ENST00000559941 ARHGEF12Q9NZN5 1544 aa32.83■■■□□ 2.85
CHRNA3-207ENST00000559941 RIMS1Q86UR5 1692 aaKnown RBP32.83■■■□□ 2.85
CHRNA3-207ENST00000559941 C9orf84Q5VXU9 1444 aa32.82■■■□□ 2.84
CHRNA3-207ENST00000559941 GPATCH8Q9UKJ3 1502 aaKnown RBP32.82■■■□□ 2.84
CHRNA3-207ENST00000559941 MTUS2Q5JR59 1369 aa32.8■■■□□ 2.84
CHRNA3-207ENST00000559941 TRAPPC8Q9Y2L5 1435 aa32.79■■■□□ 2.84
CHRNA3-207ENST00000559941 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
CHRNA3-207ENST00000559941 MLH3Q9UHC1 1453 aa32.78■■■□□ 2.84
CHRNA3-207ENST00000559941 SAMD9LQ8IVG5 1584 aa32.75■■■□□ 2.83
CHRNA3-207ENST00000559941 DIP2CQ9Y2E4 1556 aa32.75■■■□□ 2.83
CHRNA3-207ENST00000559941 MLECQ14165 292 aa32.75■■■□□ 2.83
CHRNA3-207ENST00000559941 MYT1LQ9UL68 1186 aa32.75■■■□□ 2.83
CHRNA3-207ENST00000559941 FER1L4A9Z1Z3 1794 aa32.73■■■□□ 2.83
CHRNA3-207ENST00000559941 ZNF777Q9ULD5 760 aaPredicted RBP32.73■■■□□ 2.83
CHRNA3-207ENST00000559941 EHBP1L1Q8N3D4 1523 aa32.72■■■□□ 2.83
CHRNA3-207ENST00000559941 CCNB3Q8WWL7 1395 aa32.72■■■□□ 2.83
CHRNA3-207ENST00000559941 ABCA6Q8N139 1617 aa32.72■■■□□ 2.83
CHRNA3-207ENST00000559941 REREQ9P2R6 1566 aa32.71■■■□□ 2.83
CHRNA3-207ENST00000559941 CFDP1Q9UEE9 299 aaPredicted RBP32.69■■■□□ 2.82
CHRNA3-207ENST00000559941 KIDINS220Q9ULH0 1771 aa32.68■■■□□ 2.82
CHRNA3-207ENST00000559941 SYCP2Q9BX26 1530 aa32.67■■■□□ 2.82
CHRNA3-207ENST00000559941 KIAA1107Q9UPP5 1409 aa32.65■■■□□ 2.82
CHRNA3-207ENST00000559941 PLEKHH2Q8IVE3 1493 aa32.65■■■□□ 2.82
CHRNA3-207ENST00000559941 TIAM1Q13009 1591 aa32.65■■■□□ 2.82
CHRNA3-207ENST00000559941 HNRNPMP52272 730 aaKnown RBP eCLIP32.63■■■□□ 2.81
CHRNA3-207ENST00000559941 VPS8Q8N3P4 1428 aa32.61■■■□□ 2.81
CHRNA3-207ENST00000559941 AGLP35573 1532 aa32.6■■■□□ 2.81
CHRNA3-207ENST00000559941 LMTK3Q96Q04 1460 aa32.58■■■□□ 2.81
CHRNA3-207ENST00000559941 PLPPR3Q6T4P5 718 aa32.57■■■□□ 2.8
CHRNA3-207ENST00000559941 SUPT6HQ7KZ85 1726 aaKnown RBP32.57■■■□□ 2.8
CHRNA3-207ENST00000559941 SPAG9O60271 1321 aaKnown RBP32.55■■■□□ 2.8
CHRNA3-207ENST00000559941 NCOA2Q15596 1464 aa32.52■■■□□ 2.8
CHRNA3-207ENST00000559941 ATP7AQ04656 1500 aa32.51■■■□□ 2.79
CHRNA3-207ENST00000559941 ZNF644Q9H582 1327 aaPredicted RBP32.51■■■□□ 2.79
CHRNA3-207ENST00000559941 INO80Q9ULG1 1556 aaPredicted RBP32.5■■■□□ 2.79
CHRNA3-207ENST00000559941 MBD5Q9P267 1494 aa32.47■■■□□ 2.79
CHRNA3-207ENST00000559941 LRRC9Q6ZRR7 1453 aa32.45■■■□□ 2.79
CHRNA3-207ENST00000559941 CEBPAP49715 358 aaPredicted RBP32.44■■■□□ 2.78
CHRNA3-207ENST00000559941 MAP3K1Q13233 1512 aa32.44■■■□□ 2.78
CHRNA3-207ENST00000559941 SETD1BQ9UPS6 1966 aaKnown RBP32.42■■■□□ 2.78
CHRNA3-207ENST00000559941 PREX1Q8TCU6 1659 aa32.4■■■□□ 2.78
CHRNA3-207ENST00000559941 PLXNC1O60486 1568 aa32.4■■■□□ 2.78
CHRNA3-207ENST00000559941 ESF1Q9H501 851 aaKnown RBP32.39■■■□□ 2.78
CHRNA3-207ENST00000559941 A2MP01023 1474 aa32.39■■■□□ 2.78
CHRNA3-207ENST00000559941 C3P01024 1663 aa32.39■■■□□ 2.78
CHRNA3-207ENST00000559941 ADGBQ8N7X0 1667 aa32.37■■■□□ 2.77
CHRNA3-207ENST00000559941 CAMSAP2Q08AD1 1489 aa32.37■■■□□ 2.77
CHRNA3-207ENST00000559941 HSPA2P54652 639 aa32.37■■■□□ 2.77
CHRNA3-207ENST00000559941 RTEL1-TNFRSF6BF6WH68 1400 aa32.36■■■□□ 2.77
CHRNA3-207ENST00000559941 CNTLNQ9NXG0 1405 aa32.34■■■□□ 2.77
CHRNA3-207ENST00000559941 KANK4Q5T7N3 995 aaPredicted RBP32.33■■■□□ 2.77
CHRNA3-207ENST00000559941 CCDC141Q6ZP82 1450 aa32.32■■■□□ 2.76
CHRNA3-207ENST00000559941 RSPH4AQ5TD94 716 aa32.32■■■□□ 2.76
CHRNA3-207ENST00000559941 MROH2AA6NES4 1674 aa32.3■■■□□ 2.76
CHRNA3-207ENST00000559941 ILDR1Q86SU0 546 aaPredicted RBP32.27■■■□□ 2.76
CHRNA3-207ENST00000559941 ARHGEF5Q12774 1597 aa32.27■■■□□ 2.76
CHRNA3-207ENST00000559941 UHRF1BP1Q6BDS2 1440 aa32.26■■■□□ 2.75
CHRNA3-207ENST00000559941 DHX29Q7Z478 1369 aaKnown RBP32.22■■■□□ 2.75
CHRNA3-207ENST00000559941 CLTCQ00610 1675 aaKnown RBP32.22■■■□□ 2.75
CHRNA3-207ENST00000559941 GGT6Q6P531 493 aa32.21■■■□□ 2.75
CHRNA3-207ENST00000559941 ZMYM3Q14202 1370 aa32.2■■■□□ 2.75
CHRNA3-207ENST00000559941 MYOM3Q5VTT5 1437 aa32.2■■■□□ 2.75
CHRNA3-207ENST00000559941 MIA2Q96PC5 1412 aa32.19■■■□□ 2.74
CHRNA3-207ENST00000559941 APLP2Q06481 763 aa32.19■■■□□ 2.74
CHRNA3-207ENST00000559941 PPP6R1Q9UPN7 881 aa32.19■■■□□ 2.74
CHRNA3-207ENST00000559941 TSPY4P0CV99 314 aa32.17■■■□□ 2.74
CHRNA3-207ENST00000559941 TSPY10P0CW01 314 aa32.17■■■□□ 2.74
CHRNA3-207ENST00000559941 NPATQ14207 1427 aa32.16■■■□□ 2.74
CHRNA3-207ENST00000559941 STRCQ7RTU9 1775 aa32.13■■■□□ 2.73
CHRNA3-207ENST00000559941 MAST1Q9Y2H9 1570 aa32.11■■■□□ 2.73
CHRNA3-207ENST00000559941 KIF3BO15066 747 aa32.09■■■□□ 2.73
CHRNA3-207ENST00000559941 PTPRKQ15262 1439 aa32.06■■■□□ 2.72
CHRNA3-207ENST00000559941 DMRT2Q9Y5R5 561 aa32.03■■■□□ 2.72
CHRNA3-207ENST00000559941 FAM135AQ9P2D6 1515 aa32.02■■■□□ 2.72
CHRNA3-207ENST00000559941 PTPN23Q9H3S7 1636 aa32.01■■■□□ 2.72
CHRNA3-207ENST00000559941 FBXO41Q8TF61 875 aa32■■■□□ 2.71
CHRNA3-207ENST00000559941 MYO3AQ8NEV4 1616 aa31.98■■■□□ 2.71
CHRNA3-207ENST00000559941 KDM5DQ9BY66 1539 aa31.98■■■□□ 2.71
CHRNA3-207ENST00000559941 ZNF142P52746 1687 aaPredicted RBP31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms