RNA–Protein interactions for RNA: ENST00000559863.1

IRF9-206, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-206ENST00000559863 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
IRF9-206ENST00000559863 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
IRF9-206ENST00000559863 NESP48681 1621 aa19.38■□□□□ 0.69
IRF9-206ENST00000559863 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
IRF9-206ENST00000559863 CAMK2BQ13554 666 aa19.36■□□□□ 0.69
IRF9-206ENST00000559863 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
IRF9-206ENST00000559863 CRISPLD2Q9H0B8 497 aa19.35■□□□□ 0.69
IRF9-206ENST00000559863 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
IRF9-206ENST00000559863 PITPNM1O00562 1244 aa19.32■□□□□ 0.68
IRF9-206ENST00000559863 PDE4DQ08499 809 aa19.32■□□□□ 0.68
IRF9-206ENST00000559863 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
IRF9-206ENST00000559863 TRIM66O15016 1216 aa19.31■□□□□ 0.68
IRF9-206ENST00000559863 RBM26Q5T8P6 1007 aaKnown RBP19.31■□□□□ 0.68
IRF9-206ENST00000559863 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
IRF9-206ENST00000559863 FARP1Q9Y4F1 1045 aaPredicted RBP19.29■□□□□ 0.68
IRF9-206ENST00000559863 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
IRF9-206ENST00000559863 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
IRF9-206ENST00000559863 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
IRF9-206ENST00000559863 FLIIQ13045 1269 aa19.22■□□□□ 0.67
IRF9-206ENST00000559863 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
IRF9-206ENST00000559863 ARID3AQ99856 593 aa19.21■□□□□ 0.67
IRF9-206ENST00000559863 MLLT3P42568 568 aaPredicted RBP19.2■□□□□ 0.66
IRF9-206ENST00000559863 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
IRF9-206ENST00000559863 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
IRF9-206ENST00000559863 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
IRF9-206ENST00000559863 SPDYE16A6NNV3 312 aaPredicted RBP19.15■□□□□ 0.66
IRF9-206ENST00000559863 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
IRF9-206ENST00000559863 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
IRF9-206ENST00000559863 MKRN3Q13064 507 aaKnown RBP19.13■□□□□ 0.65
IRF9-206ENST00000559863 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
IRF9-206ENST00000559863 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
IRF9-206ENST00000559863 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
IRF9-206ENST00000559863 HRCP23327 699 aa19.1■□□□□ 0.65
IRF9-206ENST00000559863 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
IRF9-206ENST00000559863 MAP3K13O43283 966 aa19.09■□□□□ 0.65
IRF9-206ENST00000559863 MS4A4AQ96JQ5 239 aa19.09■□□□□ 0.65
IRF9-206ENST00000559863 FAM117AQ9C073 453 aa19.08■□□□□ 0.64
IRF9-206ENST00000559863 MINK1Q8N4C8 1332 aaPredicted RBP19.07■□□□□ 0.64
IRF9-206ENST00000559863 APBB1O00213 710 aa19.07■□□□□ 0.64
IRF9-206ENST00000559863 PPP1R15BQ5SWA1 713 aa19.06■□□□□ 0.64
IRF9-206ENST00000559863 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
IRF9-206ENST00000559863 KIF12Q96FN5 646 aa19.06■□□□□ 0.64
IRF9-206ENST00000559863 ZBTB7CA1YPR0 619 aa19.05■□□□□ 0.64
IRF9-206ENST00000559863 C1orf115Q9H7X2 142 aa19.05■□□□□ 0.64
IRF9-206ENST00000559863 PDIA4P13667 645 aaKnown RBP19.04■□□□□ 0.64
IRF9-206ENST00000559863 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
IRF9-206ENST00000559863 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
IRF9-206ENST00000559863 PDIA6Q15084 440 aa19.01■□□□□ 0.63
IRF9-206ENST00000559863 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
IRF9-206ENST00000559863 WDR62O43379 1518 aa19■□□□□ 0.63
IRF9-206ENST00000559863 GOPCQ9HD26 462 aa18.99■□□□□ 0.63
IRF9-206ENST00000559863 GPHNQ9NQX3 736 aaPredicted RBP18.99■□□□□ 0.63
IRF9-206ENST00000559863 MAP2K5Q13163 448 aa18.97■□□□□ 0.63
IRF9-206ENST00000559863 DPYSL4O14531 572 aa18.96■□□□□ 0.63
IRF9-206ENST00000559863 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
IRF9-206ENST00000559863 AMHR2Q16671 573 aa18.95■□□□□ 0.62
IRF9-206ENST00000559863 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
IRF9-206ENST00000559863 PLEKHG3A1L390 1219 aa18.94■□□□□ 0.62
IRF9-206ENST00000559863 GPR37O15354 613 aa18.92■□□□□ 0.62
IRF9-206ENST00000559863 A6NJR5 290 aa18.91■□□□□ 0.62
IRF9-206ENST00000559863 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
IRF9-206ENST00000559863 CCDC102AQ96A19 550 aa18.9■□□□□ 0.62
IRF9-206ENST00000559863 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
IRF9-206ENST00000559863 IRF6O14896 467 aa18.88■□□□□ 0.61
IRF9-206ENST00000559863 PARP9Q8IXQ6 854 aa18.85■□□□□ 0.61
IRF9-206ENST00000559863 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
IRF9-206ENST00000559863 EMILIN3Q9NT22 766 aa18.84■□□□□ 0.61
IRF9-206ENST00000559863 PCMTD1Q96MG8 357 aaPredicted RBP18.82■□□□□ 0.6
IRF9-206ENST00000559863 GNPATO15228 680 aa18.8■□□□□ 0.6
IRF9-206ENST00000559863 TRAK2O60296 914 aa18.8■□□□□ 0.6
IRF9-206ENST00000559863 TMEM106CQ9BVX2 250 aa18.8■□□□□ 0.6
IRF9-206ENST00000559863 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
IRF9-206ENST00000559863 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
IRF9-206ENST00000559863 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
IRF9-206ENST00000559863 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
IRF9-206ENST00000559863 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
IRF9-206ENST00000559863 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
IRF9-206ENST00000559863 HIC1Q14526 733 aa18.77■□□□□ 0.6
IRF9-206ENST00000559863 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
IRF9-206ENST00000559863 FCHSD2O94868 740 aa18.74■□□□□ 0.59
IRF9-206ENST00000559863 DSG2Q14126 1118 aa18.73■□□□□ 0.59
IRF9-206ENST00000559863 TMC2Q8TDI7 906 aa18.73■□□□□ 0.59
IRF9-206ENST00000559863 GRXCR2A6NFK2 248 aa18.71■□□□□ 0.59
IRF9-206ENST00000559863 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
IRF9-206ENST00000559863 FOXK1P85037 733 aa18.7■□□□□ 0.58
IRF9-206ENST00000559863 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
IRF9-206ENST00000559863 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
IRF9-206ENST00000559863 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
IRF9-206ENST00000559863 MAP3K9P80192 1104 aa18.65■□□□□ 0.58
IRF9-206ENST00000559863 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
IRF9-206ENST00000559863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
IRF9-206ENST00000559863 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
IRF9-206ENST00000559863 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
IRF9-206ENST00000559863 KCTD17Q8N5Z5 321 aa18.62■□□□□ 0.57
IRF9-206ENST00000559863 MCM6Q14566 821 aa18.61■□□□□ 0.57
IRF9-206ENST00000559863 GIGYF2Q6Y7W6 1299 aaKnown RBP18.6■□□□□ 0.57
IRF9-206ENST00000559863 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
IRF9-206ENST00000559863 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
IRF9-206ENST00000559863 RAD21O60216 631 aa18.58■□□□□ 0.56
IRF9-206ENST00000559863 OSBPP22059 807 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms