RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL2-207ENST00000559738 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-207ENST00000559738 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
CTDSPL2-207ENST00000559738 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-207ENST00000559738 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
CTDSPL2-207ENST00000559738 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
CTDSPL2-207ENST00000559738 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
CTDSPL2-207ENST00000559738 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
CTDSPL2-207ENST00000559738 KIF3CO14782 793 aa11.58□□□□□ -0.56
CTDSPL2-207ENST00000559738 EMP3P54852 163 aa11.58□□□□□ -0.56
CTDSPL2-207ENST00000559738 TMC2Q8TDI7 906 aa11.58□□□□□ -0.56
CTDSPL2-207ENST00000559738 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
CTDSPL2-207ENST00000559738 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
CTDSPL2-207ENST00000559738 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
CTDSPL2-207ENST00000559738 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-207ENST00000559738 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
CTDSPL2-207ENST00000559738 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
CTDSPL2-207ENST00000559738 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
CTDSPL2-207ENST00000559738 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
CTDSPL2-207ENST00000559738 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
CTDSPL2-207ENST00000559738 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL2-207ENST00000559738 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
CTDSPL2-207ENST00000559738 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
CTDSPL2-207ENST00000559738 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
CTDSPL2-207ENST00000559738 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
CTDSPL2-207ENST00000559738 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
CTDSPL2-207ENST00000559738 ERBB3P21860 1342 aa11.44□□□□□ -0.58
CTDSPL2-207ENST00000559738 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.581e-6■■■■□ 20.2
CTDSPL2-207ENST00000559738 FOXK1P85037 733 aa11.42□□□□□ -0.58
CTDSPL2-207ENST00000559738 DSG2Q14126 1118 aa11.42□□□□□ -0.58
CTDSPL2-207ENST00000559738 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
CTDSPL2-207ENST00000559738 SLC34A2O95436 690 aa11.4□□□□□ -0.58
CTDSPL2-207ENST00000559738 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
CTDSPL2-207ENST00000559738 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
CTDSPL2-207ENST00000559738 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CTDSPL2-207ENST00000559738 PCDHGA4Q9Y5G9 962 aa11.39□□□□□ -0.59
CTDSPL2-207ENST00000559738 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
CTDSPL2-207ENST00000559738 NUDT7P0C024 238 aa11.37□□□□□ -0.59
CTDSPL2-207ENST00000559738 PDE4AP27815 886 aa11.34□□□□□ -0.59
CTDSPL2-207ENST00000559738 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
CTDSPL2-207ENST00000559738 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-207ENST00000559738 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
CTDSPL2-207ENST00000559738 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
CTDSPL2-207ENST00000559738 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
CTDSPL2-207ENST00000559738 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-207ENST00000559738 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
CTDSPL2-207ENST00000559738 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
CTDSPL2-207ENST00000559738 ZNF687Q8N1G0 1237 aa11.28□□□□□ -0.6
CTDSPL2-207ENST00000559738 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTDSPL2-207ENST00000559738 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-207ENST00000559738 TSHZ2Q9NRE2 1034 aa11.27□□□□□ -0.61
CTDSPL2-207ENST00000559738 TBC1D12O60347 775 aa11.25□□□□□ -0.61
CTDSPL2-207ENST00000559738 MFSD10Q14728 455 aa11.25□□□□□ -0.61
CTDSPL2-207ENST00000559738 OXER1Q8TDS5 423 aa11.25□□□□□ -0.61
CTDSPL2-207ENST00000559738 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
CTDSPL2-207ENST00000559738 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
CTDSPL2-207ENST00000559738 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
CTDSPL2-207ENST00000559738 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL2-207ENST00000559738 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
CTDSPL2-207ENST00000559738 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
CTDSPL2-207ENST00000559738 PBX2P40425 430 aa11.13□□□□□ -0.63
CTDSPL2-207ENST00000559738 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
CTDSPL2-207ENST00000559738 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
CTDSPL2-207ENST00000559738 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTDSPL2-207ENST00000559738 PPP4R3BQ5MIZ7 849 aa11.12□□□□□ -0.63
CTDSPL2-207ENST00000559738 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
CTDSPL2-207ENST00000559738 EVI5O60447 810 aa11.11□□□□□ -0.63
CTDSPL2-207ENST00000559738 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-207ENST00000559738 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
CTDSPL2-207ENST00000559738 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
CTDSPL2-207ENST00000559738 ARHGAP33O14559 1287 aa11.08□□□□□ -0.64
CTDSPL2-207ENST00000559738 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-207ENST00000559738 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
CTDSPL2-207ENST00000559738 DPYSL4O14531 572 aa11.05□□□□□ -0.64
CTDSPL2-207ENST00000559738 PSEN2P49810 448 aa11.05□□□□□ -0.64
CTDSPL2-207ENST00000559738 FOSBP53539 338 aa11.05□□□□□ -0.64
CTDSPL2-207ENST00000559738 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
CTDSPL2-207ENST00000559738 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
CTDSPL2-207ENST00000559738 E2F4Q16254 413 aa11.03□□□□□ -0.64
CTDSPL2-207ENST00000559738 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
CTDSPL2-207ENST00000559738 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
CTDSPL2-207ENST00000559738 PTGER2P43116 358 aa11.01□□□□□ -0.65
CTDSPL2-207ENST00000559738 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
CTDSPL2-207ENST00000559738 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
CTDSPL2-207ENST00000559738 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
CTDSPL2-207ENST00000559738 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-207ENST00000559738 ZDHHC16Q969W1 377 aa10.99□□□□□ -0.65
CTDSPL2-207ENST00000559738 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
CTDSPL2-207ENST00000559738 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CTDSPL2-207ENST00000559738 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
CTDSPL2-207ENST00000559738 PTPREP23469 700 aa10.95□□□□□ -0.66
CTDSPL2-207ENST00000559738 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL2-207ENST00000559738 TK2O00142 265 aa10.94□□□□□ -0.66
CTDSPL2-207ENST00000559738 PHF14O94880 888 aa10.94□□□□□ -0.66
CTDSPL2-207ENST00000559738 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
CTDSPL2-207ENST00000559738 PDIA6Q15084 440 aa10.93□□□□□ -0.66
CTDSPL2-207ENST00000559738 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CTDSPL2-207ENST00000559738 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
CTDSPL2-207ENST00000559738 DDX12PQ92771 950 aa10.92□□□□□ -0.66
CTDSPL2-207ENST00000559738 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms